RNA–Protein interactions for RNA: YKL010C

UFD4, Transcript of Ubiquitin-protein ligase (E3), yeastyeast

Gene UFD4, Length 4,452 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UFD4YKL010C COS10P52924 374 aa2□□□□□ -2.09
UFD4YKL010C LCL3P53153 274 aa2□□□□□ -2.09
UFD4YKL010C NCE103P53615 221 aa2□□□□□ -2.09
UFD4YKL010C YML108WQ03759 105 aa2□□□□□ -2.09
UFD4YKL010C MLC2Q06580 163 aa2□□□□□ -2.09
UFD4YKL010C PUN1Q06991 263 aa2□□□□□ -2.09
UFD4YKL010C SNF8Q12483 233 aa2□□□□□ -2.09
UFD4YKL010C YBL113CQ7M4S9 792 aa2□□□□□ -2.09
UFD4YKL010C URA3P03962 267 aa1.99□□□□□ -2.09
UFD4YKL010C ADE5,7P07244 802 aaKnown RBP1.99□□□□□ -2.09
UFD4YKL010C CPA1P07258 411 aaKnown RBP1.99□□□□□ -2.09
UFD4YKL010C CKS1P20486 150 aaKnown RBP1.99□□□□□ -2.09
UFD4YKL010C PEX1P24004 1043 aa1.99□□□□□ -2.09
UFD4YKL010C CMK1P27466 446 aaKnown RBP1.99□□□□□ -2.09
UFD4YKL010C CBT1P36038 271 aaPredicted RBP1.99□□□□□ -2.09
UFD4YKL010C OCA5P38738 679 aa1.99□□□□□ -2.09
UFD4YKL010C PLB1P39105 664 aa1.99□□□□□ -2.09
UFD4YKL010C IDS2P46958 469 aa1.99□□□□□ -2.09
UFD4YKL010C BAT2P47176 376 aaKnown RBP1.99□□□□□ -2.09
UFD4YKL010C PMT5P52867 743 aa1.99□□□□□ -2.09
UFD4YKL010C MPP6P53725 186 aaPredicted RBP1.99□□□□□ -2.09
UFD4YKL010C SWF1Q04629 336 aa1.99□□□□□ -2.09
UFD4YKL010C AEP3Q12089 606 aa1.99□□□□□ -2.09
UFD4YKL010C BAG7Q12128 409 aa1.99□□□□□ -2.09
UFD4YKL010C PRP8P33334 2413 aaKnown RBP1.99□□□□□ -2.09
UFD4YKL010C PDE2P06776 526 aa1.99□□□□□ -2.09
UFD4YKL010C YKR104WP0CE69 306 aa1.99□□□□□ -2.09
UFD4YKL010C SEN2P16658 377 aa1.99□□□□□ -2.09
UFD4YKL010C DBP2P24783 546 aaKnown RBP1.99□□□□□ -2.09
UFD4YKL010C PAU2P32612 120 aa1.99□□□□□ -2.09
UFD4YKL010C MSN4P33749 630 aa1.99□□□□□ -2.09
UFD4YKL010C IPI1P38803 334 aaPredicted RBP1.99□□□□□ -2.09
UFD4YKL010C CTF8P38877 133 aa1.99□□□□□ -2.09
UFD4YKL010C YIL024CP40543 189 aa1.99□□□□□ -2.09
UFD4YKL010C YDR541CQ03049 344 aa1.99□□□□□ -2.09
UFD4YKL010C REX4Q08237 289 aa1.99□□□□□ -2.09
UFD4YKL010C ATG41Q12048 136 aa1.99□□□□□ -2.09
UFD4YKL010C TPO4Q12256 659 aa1.99□□□□□ -2.09
UFD4YKL010C YOL162WP0CF19 215 aa1.99□□□□□ -2.09
UFD4YKL010C BAR1P12630 587 aa1.99□□□□□ -2.09
UFD4YKL010C RPB5P20434 215 aa1.99□□□□□ -2.09
UFD4YKL010C AHC2P25649 128 aa1.99□□□□□ -2.09
UFD4YKL010C LST4P34239 828 aa1.99□□□□□ -2.09
UFD4YKL010C NAT2P37293 288 aa1.99□□□□□ -2.09
UFD4YKL010C ALG3P38179 458 aa1.99□□□□□ -2.09
UFD4YKL010C YBR242WP38331 238 aa1.99□□□□□ -2.09
UFD4YKL010C APQ12P40532 138 aa1.99□□□□□ -2.09
UFD4YKL010C CSL4P53859 292 aaPredicted RBP1.99□□□□□ -2.09
UFD4YKL010C YNL140CP53910 189 aa1.99□□□□□ -2.09
UFD4YKL010C IMP4P53941 290 aaKnown RBP1.99□□□□□ -2.09
UFD4YKL010C YKR011CQ02209 353 aa1.99□□□□□ -2.09
UFD4YKL010C IRC13Q08630 104 aa1.99□□□□□ -2.09
UFD4YKL010C YOR365CQ08844 703 aa1.99□□□□□ -2.09
UFD4YKL010C PFA4Q12006 378 aa1.99□□□□□ -2.09
UFD4YKL010C SLF1Q12034 447 aaKnown RBP1.99□□□□□ -2.09
UFD4YKL010C PNO1Q99216 274 aaKnown RBP1.99□□□□□ -2.09
UFD4YKL010C APN1P22936 367 aa1.99□□□□□ -2.09
UFD4YKL010C PRP28P23394 588 aa1.99□□□□□ -2.09
UFD4YKL010C SCO1P23833 295 aa1.99□□□□□ -2.09
UFD4YKL010C BUB3P26449 341 aa1.99□□□□□ -2.09
UFD4YKL010C NTH1P32356 751 aa1.99□□□□□ -2.09
UFD4YKL010C GSH1P32477 678 aa1.99□□□□□ -2.09
UFD4YKL010C NDC1P32500 655 aa1.99□□□□□ -2.09
UFD4YKL010C RSM22P36056 628 aa1.99□□□□□ -2.09
UFD4YKL010C AIM46P38885 310 aa1.99□□□□□ -2.09
UFD4YKL010C YAL037WP39728 267 aa1.99□□□□□ -2.09
UFD4YKL010C MDE1P47095 244 aa1.99□□□□□ -2.09
UFD4YKL010C POP6P53218 158 aa1.99□□□□□ -2.09
UFD4YKL010C YMR178WQ03219 274 aaKnown RBP1.99□□□□□ -2.09
UFD4YKL010C ARG7Q04728 441 aa1.99□□□□□ -2.09
UFD4YKL010C KEI1Q06346 221 aa1.99□□□□□ -2.09
UFD4YKL010C ATP14Q12349 124 aa1.99□□□□□ -2.09
UFD4YKL010C SEN1Q00416 2231 aaKnown RBP1.98□□□□□ -2.09
UFD4YKL010C YEL009C-AA0A023PZF2 135 aa1.98□□□□□ -2.09
UFD4YKL010C VPS33P20795 691 aa1.98□□□□□ -2.09
UFD4YKL010C MCK1P21965 375 aaKnown RBP1.98□□□□□ -2.09
UFD4YKL010C EXG1P23776 448 aaKnown RBP1.98□□□□□ -2.09
UFD4YKL010C ATS1P31386 333 aa1.98□□□□□ -2.09
UFD4YKL010C SHE1P38200 338 aa1.98□□□□□ -2.09
UFD4YKL010C CHL4P38907 458 aa1.98□□□□□ -2.09
UFD4YKL010C CCC1P47818 322 aa1.98□□□□□ -2.09
UFD4YKL010C BPL1P48445 690 aaPredicted RBP1.98□□□□□ -2.09
UFD4YKL010C LSG1P53145 640 aaKnown RBP1.98□□□□□ -2.09
UFD4YKL010C ERG13P54839 491 aaKnown RBP1.98□□□□□ -2.09
UFD4YKL010C HHT1P61830 136 aa1.98□□□□□ -2.09
UFD4YKL010C YPL068CQ02749 293 aa1.98□□□□□ -2.09
UFD4YKL010C YMR210WQ03649 449 aa1.98□□□□□ -2.09
UFD4YKL010C COX20Q04935 205 aa1.98□□□□□ -2.09
UFD4YKL010C MRPL51Q06090 140 aaPredicted RBP1.98□□□□□ -2.09
UFD4YKL010C RRP9Q06506 573 aaKnown RBP1.98□□□□□ -2.09
UFD4YKL010C RSC3Q06639 885 aa1.98□□□□□ -2.09
UFD4YKL010C IPK1Q06667 281 aa1.98□□□□□ -2.09
UFD4YKL010C LUC7Q07508 261 aaPredicted RBP1.98□□□□□ -2.09
UFD4YKL010C HIS3P06633 220 aa1.98□□□□□ -2.09
UFD4YKL010C RNQ1P25367 405 aa1.98□□□□□ -2.09
UFD4YKL010C SNC1P31109 117 aa1.98□□□□□ -2.09
UFD4YKL010C ATP11P32453 318 aa1.98□□□□□ -2.09
UFD4YKL010C EMP24P32803 203 aaKnown RBP1.98□□□□□ -2.09
UFD4YKL010C TRS65P32893 560 aa1.98□□□□□ -2.09
UFD4YKL010C SDH3P33421 198 aa1.98□□□□□ -2.09
Retrieved 100 of 5,963 RNA–protein pairs in 17.3 ms