RNA–Protein interactions for RNA: YHR098C

SFB3, Transcript of Component of the Sec23p-Sfb3p heterodimer of the COPII vesicle coat, yeastyeast

Gene SFB3, Length 2,790 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SFB3YHR098C SFB3P38810 929 aa5.36□□□□□ -1.55
SFB3YHR098C MDM31P38880 579 aa5.36□□□□□ -1.55
SFB3YHR098C PFA3P42836 336 aa5.36□□□□□ -1.55
SFB3YHR098C GCV1P48015 400 aa5.36□□□□□ -1.55
SFB3YHR098C BUD9P53226 547 aa5.36□□□□□ -1.55
SFB3YHR098C YPL108WQ02872 168 aaPredicted RBP5.36□□□□□ -1.55
SFB3YHR098C YDR124WQ04608 324 aa5.36□□□□□ -1.55
SFB3YHR098C MRPL35Q06678 367 aa5.36□□□□□ -1.55
SFB3YHR098C SHS1Q07657 551 aa5.36□□□□□ -1.55
SFB3YHR098C SCEIP03882 235 aa5.36□□□□□ -1.55
SFB3YHR098C RPL4AP10664 362 aaKnown RBP5.36□□□□□ -1.55
SFB3YHR098C RRP7P25368 297 aaPredicted RBP5.36□□□□□ -1.55
SFB3YHR098C YCR061WP25639 631 aa5.36□□□□□ -1.55
SFB3YHR098C SFC1P33303 322 aa5.36□□□□□ -1.55
SFB3YHR098C PMT1P33775 817 aa5.36□□□□□ -1.55
SFB3YHR098C YKL162CP36052 402 aa5.36□□□□□ -1.55
SFB3YHR098C SOL2P37262 315 aa5.36□□□□□ -1.55
SFB3YHR098C MMS4P38257 691 aa5.36□□□□□ -1.55
SFB3YHR098C RTC3P38804 111 aaPredicted RBP5.36□□□□□ -1.55
SFB3YHR098C PAN6P40459 309 aa5.36□□□□□ -1.55
SFB3YHR098C UTP25P40498 721 aaKnown RBP5.36□□□□□ -1.55
SFB3YHR098C PKP1P40530 394 aa5.36□□□□□ -1.55
SFB3YHR098C RPL4BP49626 362 aaKnown RBP5.36□□□□□ -1.55
SFB3YHR098C COS12P53053 380 aa5.36□□□□□ -1.55
SFB3YHR098C VPS73P53142 486 aaKnown RBP5.36□□□□□ -1.55
SFB3YHR098C EAR1Q03212 550 aa5.36□□□□□ -1.55
SFB3YHR098C TRS31Q03337 283 aa5.36□□□□□ -1.55
SFB3YHR098C GOT1Q03554 138 aa5.36□□□□□ -1.55
SFB3YHR098C CAC2Q04199 468 aa5.36□□□□□ -1.55
SFB3YHR098C YMR087WQ04299 284 aa5.36□□□□□ -1.55
SFB3YHR098C VBA1Q04301 562 aa5.36□□□□□ -1.55
SFB3YHR098C ISA1Q07821 250 aaPredicted RBP5.36□□□□□ -1.55
SFB3YHR098C EFG1Q3E705 233 aaKnown RBP5.36□□□□□ -1.55
SFB3YHR098C HXK2P04807 486 aaKnown RBP5.35□□□□□ -1.55
SFB3YHR098C SPS4P09937 338 aa5.35□□□□□ -1.55
SFB3YHR098C NHP6BP11633 99 aaKnown RBP5.35□□□□□ -1.55
SFB3YHR098C CDC26P14724 124 aa5.35□□□□□ -1.55
SFB3YHR098C HNM1P19807 563 aa5.35□□□□□ -1.55
SFB3YHR098C MRPL44P19956 98 aa5.35□□□□□ -1.55
SFB3YHR098C DCC1P25559 380 aa5.35□□□□□ -1.55
SFB3YHR098C ELF1P36053 145 aa5.35□□□□□ -1.55
SFB3YHR098C ASC1P38011 319 aaKnown RBP5.35□□□□□ -1.55
SFB3YHR098C YMC2P38087 329 aa5.35□□□□□ -1.55
SFB3YHR098C AYR1P40471 297 aa5.35□□□□□ -1.55
SFB3YHR098C YGR201CP42936 225 aa5.35□□□□□ -1.55
SFB3YHR098C SCD6P45978 349 aaKnown RBP RIP-Chip data5.35□□□□□ -1.55not detected
SFB3YHR098C RLI1Q03195 608 aaKnown RBP5.35□□□□□ -1.55
SFB3YHR098C SKY1Q03656 742 aa5.35□□□□□ -1.55
SFB3YHR098C LRS4Q04087 347 aaKnown RBP5.35□□□□□ -1.55
SFB3YHR098C GAS2Q06135 555 aa5.35□□□□□ -1.55
SFB3YHR098C TMA10Q06177 86 aa5.35□□□□□ -1.55
SFB3YHR098C GAS5Q08193 484 aa5.35□□□□□ -1.55
SFB3YHR098C SPC3Q12133 184 aa5.35□□□□□ -1.55
SFB3YHR098C UPC2Q12151 913 aa5.35□□□□□ -1.55
SFB3YHR098C DED1P06634 604 aaKnown RBP5.35□□□□□ -1.55
SFB3YHR098C AAT2P23542 418 aaKnown RBP5.35□□□□□ -1.55
SFB3YHR098C DAL80P26343 269 aa5.35□□□□□ -1.55
SFB3YHR098C AVT5P38176 459 aa5.35□□□□□ -1.55
SFB3YHR098C RFC4P40339 323 aaKnown RBP5.35□□□□□ -1.55
SFB3YHR098C PAM16P42949 149 aa5.35□□□□□ -1.55
SFB3YHR098C GTO1P48239 356 aa5.35□□□□□ -1.55
SFB3YHR098C PHO23P50947 330 aa5.35□□□□□ -1.55
SFB3YHR098C BOL2P53082 120 aa5.35□□□□□ -1.55
SFB3YHR098C HCH1P53834 153 aa5.35□□□□□ -1.55
SFB3YHR098C MRPL19P53875 158 aa5.35□□□□□ -1.55
SFB3YHR098C RAD28Q12021 506 aa5.35□□□□□ -1.55
SFB3YHR098C YPR071WQ12346 211 aa5.35□□□□□ -1.55
SFB3YHR098C CTF3Q12748 733 aa5.35□□□□□ -1.55
SFB3YHR098C SIR2P06700 562 aa5.34□□□□□ -1.55
SFB3YHR098C MRP1P10662 321 aaKnown RBP5.34□□□□□ -1.55
SFB3YHR098C SNF6P18888 332 aa5.34□□□□□ -1.55
SFB3YHR098C IDH1P28834 360 aaKnown RBP RIP-Chip data5.34□□□□□ -1.55not detected
SFB3YHR098C MRP20P32387 263 aa5.34□□□□□ -1.55
SFB3YHR098C POL12P38121 705 aaPredicted RBP5.34□□□□□ -1.55
SFB3YHR098C ATG8P38182 117 aaRIP-Chip data5.34□□□□□ -1.55not detected
SFB3YHR098C YBL028CP38202 106 aa5.34□□□□□ -1.55
SFB3YHR098C ALG14P38242 237 aa5.34□□□□□ -1.55
SFB3YHR098C TSL1P38427 1098 aaKnown RBP5.34□□□□□ -1.55
SFB3YHR098C YHR122WP38829 231 aa5.34□□□□□ -1.55
SFB3YHR098C AIM46P38885 310 aa5.34□□□□□ -1.55
SFB3YHR098C AIM10P39965 576 aaKnown RBP5.34□□□□□ -1.55
SFB3YHR098C GAB1P41733 394 aa5.34□□□□□ -1.55
SFB3YHR098C MEP2P41948 499 aa5.34□□□□□ -1.55
SFB3YHR098C IRC7P43623 340 aa5.34□□□□□ -1.55
SFB3YHR098C PKP2P53170 491 aa5.34□□□□□ -1.55
SFB3YHR098C SWF1Q04629 336 aa5.34□□□□□ -1.55
SFB3YHR098C VID22Q05934 901 aa5.34□□□□□ -1.55
SFB3YHR098C GPM2Q12008 311 aa5.34□□□□□ -1.55
SFB3YHR098C NUS1Q12063 375 aa5.34□□□□□ -1.55
SFB3YHR098C MRH1Q12117 320 aaPredicted RBP5.34□□□□□ -1.55
SFB3YHR098C RMD5Q12508 421 aa5.34□□□□□ -1.55
SFB3YHR098C SSA3P09435 649 aaKnown RBP5.34□□□□□ -1.55
SFB3YHR098C ASP3-2P0CX77 362 aa5.34□□□□□ -1.55
SFB3YHR098C ASP3-3P0CX78 362 aa5.34□□□□□ -1.55
SFB3YHR098C ASP3-4P0CX79 362 aa5.34□□□□□ -1.55
SFB3YHR098C ASP3-1P0CZ17 362 aa5.34□□□□□ -1.55
SFB3YHR098C NAM2P11325 894 aa5.34□□□□□ -1.55
SFB3YHR098C RPB3P16370 318 aaKnown RBP5.34□□□□□ -1.55
SFB3YHR098C STE50P25344 346 aa5.34□□□□□ -1.55
SFB3YHR098C BUB3P26449 341 aa5.34□□□□□ -1.55
Retrieved 100 of 5,963 RNA–protein pairs in 18.4 ms