RNA–Protein interactions for RNA: YFR004W

RPN11, Transcript of Metalloprotease subunit of 19S regulatory particle, yeastyeast

Gene RPN11, Length 921 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPN11YFR004W PEX25Q02969 394 aa5.62□□□□□ -1.51
RPN11YFR004W TY2A-DR2Q03483 438 aa5.62□□□□□ -1.51
RPN11YFR004W RCF1Q03713 159 aa5.62□□□□□ -1.51
RPN11YFR004W PEX10Q05568 337 aa5.62□□□□□ -1.51
RPN11YFR004W TEN1Q07921 160 aa5.62□□□□□ -1.51
RPN11YFR004W AVO1Q08236 1176 aa5.62□□□□□ -1.51
RPN11YFR004W ACF2Q12168 779 aa5.62□□□□□ -1.51
RPN11YFR004W NFI1Q12216 726 aa5.62□□□□□ -1.51
RPN11YFR004W TY2A-BQ12260 438 aa5.62□□□□□ -1.51
RPN11YFR004W TY2A-OR2Q12293 438 aa5.62□□□□□ -1.51
RPN11YFR004W TY2A-DR1Q12392 438 aa5.62□□□□□ -1.51
RPN11YFR004W TY2A-OR1Q12439 438 aa5.62□□□□□ -1.51
RPN11YFR004W MRX4Q12467 430 aa5.62□□□□□ -1.51
RPN11YFR004W TY2A-DR3Q99303 438 aa5.62□□□□□ -1.51
RPN11YFR004W MET2P08465 486 aa5.61□□□□□ -1.51
RPN11YFR004W KIN2P13186 1147 aaKnown RBP5.61□□□□□ -1.51
RPN11YFR004W ERS1P17261 260 aa5.61□□□□□ -1.51
RPN11YFR004W VPS33P20795 691 aa5.61□□□□□ -1.51
RPN11YFR004W BUD5P25300 642 aaPredicted RBP5.61□□□□□ -1.51
RPN11YFR004W YCL049CP25577 312 aa5.61□□□□□ -1.51
RPN11YFR004W RCN1P36054 211 aa5.61□□□□□ -1.51
RPN11YFR004W YHK8P38776 514 aa5.61□□□□□ -1.51
RPN11YFR004W SBE22P38814 852 aa5.61□□□□□ -1.51
RPN11YFR004W YHR177WP38867 453 aa5.61□□□□□ -1.51
RPN11YFR004W CTF8P38877 133 aa5.61□□□□□ -1.51
RPN11YFR004W AIM2P39721 246 aa5.61□□□□□ -1.51
RPN11YFR004W LYS12P40495 371 aaKnown RBP5.61□□□□□ -1.51
RPN11YFR004W TED1P40533 473 aa5.61□□□□□ -1.51
RPN11YFR004W IKS1P47042 667 aa5.61□□□□□ -1.51
RPN11YFR004W HOC1P47124 396 aa5.61□□□□□ -1.51
RPN11YFR004W JHD2P47156 728 aaPredicted RBP5.61□□□□□ -1.51
RPN11YFR004W HMS2P47175 358 aa5.61□□□□□ -1.51
RPN11YFR004W PAC10P48363 199 aa5.61□□□□□ -1.51
RPN11YFR004W MSE1P48525 536 aa5.61□□□□□ -1.51
RPN11YFR004W IMD4P50094 524 aaKnown RBP5.61□□□□□ -1.51
RPN11YFR004W ERG26P53199 349 aaKnown RBP5.61□□□□□ -1.51
RPN11YFR004W SNZ1Q03148 297 aa5.61□□□□□ -1.51
RPN11YFR004W ROT1Q03691 256 aa5.61□□□□□ -1.51
RPN11YFR004W PEX27Q08580 376 aa5.61□□□□□ -1.51
RPN11YFR004W DIN7Q12086 430 aa5.61□□□□□ -1.51
RPN11YFR004W HOP1P20050 605 aa5.6□□□□□ -1.51
RPN11YFR004W SEC62P21825 274 aa5.6□□□□□ -1.51
RPN11YFR004W RPS1BP23248 255 aaKnown RBP5.6□□□□□ -1.51
RPN11YFR004W IMG1P25626 169 aa5.6□□□□□ -1.51
RPN11YFR004W MKK1P32490 508 aa5.6□□□□□ -1.51
RPN11YFR004W TUL1P36096 758 aa5.6□□□□□ -1.51
RPN11YFR004W APT2P36973 181 aa5.6□□□□□ -1.51
RPN11YFR004W GGC1P38988 300 aa5.6□□□□□ -1.51
RPN11YFR004W FCY21P40039 528 aa5.6□□□□□ -1.51
RPN11YFR004W DDI1P40087 428 aa5.6□□□□□ -1.51
RPN11YFR004W APQ12P40532 138 aa5.6□□□□□ -1.51
RPN11YFR004W YGR201CP42936 225 aa5.6□□□□□ -1.51
RPN11YFR004W BPL1P48445 690 aaPredicted RBP5.6□□□□□ -1.51
RPN11YFR004W SDT1P53078 280 aa5.6□□□□□ -1.51
RPN11YFR004W ORM1P53224 222 aa5.6□□□□□ -1.51
RPN11YFR004W YGR079WP53249 370 aa5.6□□□□□ -1.51
RPN11YFR004W SYF2P53277 215 aaPredicted RBP5.6□□□□□ -1.51
RPN11YFR004W RIM13Q03792 727 aa5.6□□□□□ -1.51
RPN11YFR004W SFM1Q12314 213 aa5.6□□□□□ -1.51
RPN11YFR004W RPS17AP02407 136 aaKnown RBP5.59□□□□□ -1.51
RPN11YFR004W AI1P03875 834 aa5.59□□□□□ -1.51
RPN11YFR004W RPS17BP14127 136 aaKnown RBP5.59□□□□□ -1.51
RPN11YFR004W MDH1P17505 334 aaKnown RBP RIP-Chip data5.59□□□□□ -1.51not detected
RPN11YFR004W DBP3P20447 523 aaKnown RBP5.59□□□□□ -1.51
RPN11YFR004W OAC1P32332 324 aa5.59□□□□□ -1.51
RPN11YFR004W NDC1P32500 655 aa5.59□□□□□ -1.51
RPN11YFR004W LOT5P34234 306 aa5.59□□□□□ -1.51
RPN11YFR004W KKQ8P36004 724 aa5.59□□□□□ -1.51
RPN11YFR004W RRN10P38204 145 aa5.59□□□□□ -1.51
RPN11YFR004W FMP23P38231 175 aa5.59□□□□□ -1.51
RPN11YFR004W TRM7P38238 310 aaKnown RBP5.59□□□□□ -1.51
RPN11YFR004W BIG1P38813 335 aa5.59□□□□□ -1.51
RPN11YFR004W MET30P39014 640 aa5.59□□□□□ -1.51
RPN11YFR004W PCL6P40038 420 aa5.59□□□□□ -1.51
RPN11YFR004W STE24P47154 453 aa5.59□□□□□ -1.51
RPN11YFR004W DIE2P50076 525 aa5.59□□□□□ -1.51
RPN11YFR004W MRH4P53166 561 aa5.59□□□□□ -1.51
RPN11YFR004W CTK1Q03957 528 aaKnown RBP5.59□□□□□ -1.51
RPN11YFR004W YDR514CQ04408 483 aa5.59□□□□□ -1.51
RPN11YFR004W RSF1Q05043 376 aa5.59□□□□□ -1.51
RPN11YFR004W ATG38Q05789 226 aaKnown RBP5.59□□□□□ -1.51
RPN11YFR004W COA4Q05809 96 aa5.59□□□□□ -1.51
RPN11YFR004W PDR8Q06149 701 aa5.59□□□□□ -1.51
RPN11YFR004W YPS7Q06325 596 aa5.59□□□□□ -1.51
RPN11YFR004W ARO10Q06408 635 aa5.59□□□□□ -1.51
RPN11YFR004W THI72Q08579 599 aa5.59□□□□□ -1.51
RPN11YFR004W UIP4Q08926 304 aa5.59□□□□□ -1.51
RPN11YFR004W RKM1Q08961 583 aaPredicted RBP5.59□□□□□ -1.51
RPN11YFR004W SIA1Q12212 622 aa5.59□□□□□ -1.51
RPN11YFR004W YPR064WQ12492 139 aa5.59□□□□□ -1.51
RPN11YFR004W FUR1P18562 216 aaKnown RBP5.58□□□□□ -1.52
RPN11YFR004W PRP2P20095 876 aaPredicted RBP5.58□□□□□ -1.52
RPN11YFR004W PTC6P25646 442 aa5.58□□□□□ -1.52
RPN11YFR004W FMP46P36141 133 aaKnown RBP5.58□□□□□ -1.52
RPN11YFR004W MRPL15P36523 253 aa5.58□□□□□ -1.52
RPN11YFR004W MNN2P38069 597 aa5.58□□□□□ -1.52
RPN11YFR004W IPI1P38803 334 aaPredicted RBP5.58□□□□□ -1.52
RPN11YFR004W YIL086CP40503 102 aa5.58□□□□□ -1.52
RPN11YFR004W SER2P42941 309 aa5.58□□□□□ -1.52
RPN11YFR004W BIT61P47041 543 aa5.58□□□□□ -1.52
Retrieved 100 of 5,963 RNA–protein pairs in 13.3 ms