RNA–Protein interactions for RNA: YEL012W

UBC8, Transcript of Ubiquitin-conjugating enzyme that regulates gluconeogenesis, yeast

Gene UBC8, Length 657 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
UBC8	YEL012W	VPS52	P39904	641 aa		3.86	□□□□□ -1.79
UBC8	YEL012W	ICE2	P40499	491 aa		3.86	□□□□□ -1.79
UBC8	YEL012W	FAR3	P46671	204 aa		3.86	□□□□□ -1.79
UBC8	YEL012W	BNA3	P47039	444 aa	Known RBP	3.86	□□□□□ -1.79
UBC8	YEL012W	YNL260C	P53846	198 aa		3.86	□□□□□ -1.79
UBC8	YEL012W	MPS1	P54199	764 aa		3.86	□□□□□ -1.79
UBC8	YEL012W	APC4	Q04601	652 aa		3.86	□□□□□ -1.79
UBC8	YEL012W	ATG26	Q06321	1198 aa		3.86	□□□□□ -1.79
UBC8	YEL012W	RLM1	Q12224	676 aa		3.86	□□□□□ -1.79
UBC8	YEL012W	CRC1	Q12289	327 aa		3.86	□□□□□ -1.79
UBC8	YEL012W	PRP46	Q12417	451 aa	Predicted RBP	3.86	□□□□□ -1.79
UBC8	YEL012W	YPL247C	Q12523	523 aa		3.86	□□□□□ -1.79
UBC8	YEL012W	BUD5	P25300	642 aa	Predicted RBP	3.85	□□□□□ -1.79
UBC8	YEL012W	MRE11	P32829	692 aa		3.85	□□□□□ -1.79
UBC8	YEL012W	PTR2	P32901	601 aa		3.85	□□□□□ -1.79
UBC8	YEL012W	ASK1	P35734	292 aa		3.85	□□□□□ -1.79
UBC8	YEL012W	ASC1	P38011	319 aa	Known RBP	3.85	□□□□□ -1.79
UBC8	YEL012W	APE4	P38821	490 aa		3.85	□□□□□ -1.79
UBC8	YEL012W	PRP39	P39682	629 aa	Known RBP	3.85	□□□□□ -1.79
UBC8	YEL012W	MEP1	P40260	492 aa		3.85	□□□□□ -1.79
UBC8	YEL012W	YIL169C	P40442	995 aa		3.85	□□□□□ -1.79
UBC8	YEL012W	YIL060W	P40519	144 aa		3.85	□□□□□ -1.79
UBC8	YEL012W	YNL320W	P42840	284 aa		3.85	□□□□□ -1.79
UBC8	YEL012W	UBP8	P50102	471 aa		3.85	□□□□□ -1.79
UBC8	YEL012W	GIP3	Q03016	1276 aa		3.85	□□□□□ -1.79
UBC8	YEL012W	YDR541C	Q03049	344 aa		3.85	□□□□□ -1.79
UBC8	YEL012W	SPC19	Q03954	165 aa		3.85	□□□□□ -1.79
UBC8	YEL012W	YPR174C	Q06616	221 aa	Predicted RBP	3.85	□□□□□ -1.79
UBC8	YEL012W	RUP1	Q12242	671 aa		3.85	□□□□□ -1.79
UBC8	YEL012W	MDY2	Q12285	212 aa		3.85	□□□□□ -1.79
UBC8	YEL012W	PUT2	P07275	575 aa		3.84	□□□□□ -1.79
UBC8	YEL012W	GPA2	P10823	449 aa		3.84	□□□□□ -1.79
UBC8	YEL012W	SPS100	P13130	326 aa		3.84	□□□□□ -1.79
UBC8	YEL012W	RSR1	P13856	272 aa		3.84	□□□□□ -1.79
UBC8	YEL012W	HEM15	P16622	393 aa		3.84	□□□□□ -1.79
UBC8	YEL012W	PET123	P17558	318 aa		3.84	□□□□□ -1.79
UBC8	YEL012W	ART10	P18634	518 aa	Known RBP	3.84	□□□□□ -1.79
UBC8	YEL012W	YAP1	P19880	650 aa	Known RBP	3.84	□□□□□ -1.79
UBC8	YEL012W	BUD14	P27637	709 aa		3.84	□□□□□ -1.79
UBC8	YEL012W	IDH2	P28241	369 aa	Known RBP	3.84	□□□□□ -1.79
UBC8	YEL012W	BNA4	P38169	460 aa		3.84	□□□□□ -1.79
UBC8	YEL012W	YIL024C	P40543	189 aa		3.84	□□□□□ -1.79
UBC8	YEL012W	VMA13	P41807	478 aa	Known RBP	3.84	□□□□□ -1.79
UBC8	YEL012W	ECO1	P43605	281 aa		3.84	□□□□□ -1.79
UBC8	YEL012W	RPN14	P53196	417 aa		3.84	□□□□□ -1.79
UBC8	YEL012W	YGR067C	P53243	804 aa		3.84	□□□□□ -1.79
UBC8	YEL012W	YMR209C	Q03648	457 aa		3.84	□□□□□ -1.79
UBC8	YEL012W	GAS3	Q03655	524 aa		3.84	□□□□□ -1.79
UBC8	YEL012W	SML1	Q04964	104 aa		3.84	□□□□□ -1.79
UBC8	YEL012W	RQC1	Q05468	723 aa	Known RBP	3.84	□□□□□ -1.79
UBC8	YEL012W	YET3	Q07451	203 aa		3.84	□□□□□ -1.79
UBC8	YEL012W	REX4	Q08237	289 aa		3.84	□□□□□ -1.79
UBC8	YEL012W	ERP4	Q12450	207 aa		3.84	□□□□□ -1.79
UBC8	YEL012W	MHT1	Q12525	324 aa		3.84	□□□□□ -1.79
UBC8	YEL012W	DYN1	P36022	4092 aa		3.84	□□□□□ -1.79
UBC8	YEL012W	ARG4	P04076	463 aa	Predicted RBP	3.83	□□□□□ -1.8
UBC8	YEL012W	PDA1	P16387	420 aa	Known RBP	3.83	□□□□□ -1.8
UBC8	YEL012W	DAP2	P18962	818 aa		3.83	□□□□□ -1.8
UBC8	YEL012W	RPB4	P20433	221 aa	Predicted RBP	3.83	□□□□□ -1.8
UBC8	YEL012W	SGV1	P23293	657 aa	Known RBP	3.83	□□□□□ -1.8
UBC8	YEL012W	BOS1	P25385	244 aa		3.83	□□□□□ -1.8
UBC8	YEL012W	CRM1	P30822	1084 aa	Known RBP	3.83	□□□□□ -1.8
UBC8	YEL012W	GCG1	P32656	232 aa	Known RBP	3.83	□□□□□ -1.8
UBC8	YEL012W	CBF5	P33322	483 aa	Known RBP RIP-Chip data	3.83	□□□□□ -1.8	not detected
UBC8	YEL012W	YKL100C	P34248	587 aa		3.83	□□□□□ -1.8
UBC8	YEL012W	YPT53	P36019	220 aa		3.83	□□□□□ -1.8
UBC8	YEL012W	GRE3	P38715	327 aa	Known RBP RIP-Chip data	3.83	□□□□□ -1.8	not detected
UBC8	YEL012W	CAJ1	P39101	391 aa		3.83	□□□□□ -1.8
UBC8	YEL012W	PHO90	P39535	881 aa		3.83	□□□□□ -1.8
UBC8	YEL012W	ALG5	P40350	334 aa		3.83	□□□□□ -1.8
UBC8	YEL012W	PRM10	P42946	383 aa		3.83	□□□□□ -1.8
UBC8	YEL012W	MIC19	P43594	170 aa		3.83	□□□□□ -1.8
UBC8	YEL012W	YPT32	P51996	222 aa	Known RBP	3.83	□□□□□ -1.8
UBC8	YEL012W	SEH1	P53011	349 aa	Known RBP	3.83	□□□□□ -1.8
UBC8	YEL012W	PKP2	P53170	491 aa		3.83	□□□□□ -1.8
UBC8	YEL012W	SHY1	P53266	389 aa		3.83	□□□□□ -1.8
UBC8	YEL012W	RSM23	Q01163	450 aa		3.83	□□□□□ -1.8
UBC8	YEL012W	RMI1	Q02685	241 aa		3.83	□□□□□ -1.8
UBC8	YEL012W	SKI8	Q02793	397 aa	Predicted RBP	3.83	□□□□□ -1.8
UBC8	YEL012W	LGE1	Q02796	332 aa	Known RBP	3.83	□□□□□ -1.8
UBC8	YEL012W	YMR155W	Q03795	547 aa		3.83	□□□□□ -1.8
UBC8	YEL012W	FIN1	Q03898	291 aa		3.83	□□□□□ -1.8
UBC8	YEL012W	HPT1	Q04178	221 aa	Known RBP	3.83	□□□□□ -1.8
UBC8	YEL012W	YMR027W	Q04371	470 aa		3.83	□□□□□ -1.8
UBC8	YEL012W	NCE102	Q12207	173 aa	RIP-Chip data	3.83	□□□□□ -1.8	not detected
UBC8	YEL012W	BRR1	Q99177	341 aa	Predicted RBP	3.83	□□□□□ -1.8
UBC8	YEL012W	YSF3	P0C074	85 aa	Predicted RBP	3.82	□□□□□ -1.8
UBC8	YEL012W	GPI12	P23797	304 aa		3.82	□□□□□ -1.8
UBC8	YEL012W	SPB1	P25582	841 aa	Predicted RBP	3.82	□□□□□ -1.8
UBC8	YEL012W	SEC66	P33754	206 aa		3.82	□□□□□ -1.8
UBC8	YEL012W	BYE1	P36106	594 aa		3.82	□□□□□ -1.8
UBC8	YEL012W	RPL32	P38061	130 aa	Known RBP	3.82	□□□□□ -1.8
UBC8	YEL012W	ETR1	P38071	380 aa		3.82	□□□□□ -1.8
UBC8	YEL012W	BZZ1	P38822	633 aa		3.82	□□□□□ -1.8
UBC8	YEL012W	AXL1	P40851	1208 aa		3.82	□□□□□ -1.8
UBC8	YEL012W	GCD14	P46959	383 aa	Predicted RBP	3.82	□□□□□ -1.8
UBC8	YEL012W	AIM22	P47051	409 aa		3.82	□□□□□ -1.8
UBC8	YEL012W	RAD17	P48581	401 aa		3.82	□□□□□ -1.8
UBC8	YEL012W	AIF1	P52923	378 aa		3.82	□□□□□ -1.8
UBC8	YEL012W	MPA43	P53583	542 aa	Predicted RBP	3.82	□□□□□ -1.8

Retrieved 100 of 5,963 RNA–protein pairs in 23.9 ms