RNA–Protein interactions for RNA: YDR254W

CHL4, Transcript of Outer kinetochore protein required for chromosome stability, yeast

Gene CHL4, Length 1,377 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CHL4	YDR254W	TMT1	P32643	299 aa		5.44	□□□□□ -1.54
CHL4	YDR254W	PRS2	P38620	318 aa	Known RBP	5.44	□□□□□ -1.54
CHL4	YDR254W	CIN4	P39110	191 aa		5.44	□□□□□ -1.54
CHL4	YDR254W	ALG8	P40351	577 aa		5.44	□□□□□ -1.54
CHL4	YDR254W	CHA4	P43634	648 aa		5.44	□□□□□ -1.54
CHL4	YDR254W	NIF3	P53081	288 aa		5.44	□□□□□ -1.54
CHL4	YDR254W	ERG13	P54839	491 aa	Known RBP	5.44	□□□□□ -1.54
CHL4	YDR254W	SLG1	P54867	378 aa		5.44	□□□□□ -1.54
CHL4	YDR254W	PLB3	Q08108	686 aa		5.44	□□□□□ -1.54
CHL4	YDR254W	FRE7	Q12333	620 aa		5.44	□□□□□ -1.54
CHL4	YDR254W	RPN6	Q12377	434 aa		5.44	□□□□□ -1.54
CHL4	YDR254W	SNT2	P53127	1403 aa		5.44	□□□□□ -1.54
CHL4	YDR254W	RAV1	P47104	1357 aa		5.43	□□□□□ -1.54
CHL4	YDR254W	YLR415C	O13578	112 aa		5.43	□□□□□ -1.54
CHL4	YDR254W	COR1	P07256	457 aa		5.43	□□□□□ -1.54
CHL4	YDR254W	RPS28B	P0C0X0	67 aa	Known RBP	5.43	□□□□□ -1.54
CHL4	YDR254W	DBF2	P22204	572 aa		5.43	□□□□□ -1.54
CHL4	YDR254W	AIM17	P23180	465 aa	Known RBP	5.43	□□□□□ -1.54
CHL4	YDR254W	SHG1	P38337	142 aa		5.43	□□□□□ -1.54
CHL4	YDR254W	NPT1	P39683	429 aa	Known RBP	5.43	□□□□□ -1.54
CHL4	YDR254W	BDH1	P39714	382 aa		5.43	□□□□□ -1.54
CHL4	YDR254W	NBP35	P52920	328 aa		5.43	□□□□□ -1.54
CHL4	YDR254W	SHY1	P53266	389 aa		5.43	□□□□□ -1.54
CHL4	YDR254W	YTP1	P53584	459 aa		5.43	□□□□□ -1.54
CHL4	YDR254W	KTR5	P53966	522 aa	Predicted RBP	5.43	□□□□□ -1.54
CHL4	YDR254W	YMR178W	Q03219	274 aa	Known RBP	5.43	□□□□□ -1.54
CHL4	YDR254W	SMP3	Q04174	516 aa		5.43	□□□□□ -1.54
CHL4	YDR254W	MRI1	Q06489	411 aa	Known RBP	5.43	□□□□□ -1.54
CHL4	YDR254W	TEN1	Q07921	160 aa		5.43	□□□□□ -1.54
CHL4	YDR254W	YPR022C	Q12139	1133 aa		5.43	□□□□□ -1.54
CHL4	YDR254W	NSL1	Q12143	216 aa		5.43	□□□□□ -1.54
CHL4	YDR254W	RPS28A	Q3E7X9	67 aa	Predicted RBP	5.43	□□□□□ -1.54
CHL4	YDR254W	LTE1	P07866	1435 aa		5.43	□□□□□ -1.54
CHL4	YDR254W	HIS1	P00498	297 aa	Known RBP	5.42	□□□□□ -1.54
CHL4	YDR254W	SSC1	P0CS90	654 aa	Known RBP	5.42	□□□□□ -1.54
CHL4	YDR254W	COS2	P0CX12	379 aa		5.42	□□□□□ -1.54
CHL4	YDR254W	COS3	P0CX13	379 aa		5.42	□□□□□ -1.54
CHL4	YDR254W	ZWF1	P11412	505 aa	Known RBP	5.42	□□□□□ -1.54
CHL4	YDR254W	URA6	P15700	204 aa		5.42	□□□□□ -1.54
CHL4	YDR254W	FUB1	P25659	250 aa		5.42	□□□□□ -1.54
CHL4	YDR254W	SOF1	P33750	489 aa	Known RBP	5.42	□□□□□ -1.54
CHL4	YDR254W	SOR1	P35497	357 aa	Known RBP	5.42	□□□□□ -1.54
CHL4	YDR254W	RPL32	P38061	130 aa	Known RBP	5.42	□□□□□ -1.54
CHL4	YDR254W	RIB5	P38145	238 aa		5.42	□□□□□ -1.54
CHL4	YDR254W	SDH8	P38345	138 aa		5.42	□□□□□ -1.54
CHL4	YDR254W	RRP4	P38792	359 aa	Known RBP	5.42	□□□□□ -1.54
CHL4	YDR254W	CHS7	P38843	316 aa		5.42	□□□□□ -1.54
CHL4	YDR254W	MBB1	P39534	108 aa		5.42	□□□□□ -1.54
CHL4	YDR254W	GET2	P40056	285 aa		5.42	□□□□□ -1.54
CHL4	YDR254W	YGR201C	P42936	225 aa		5.42	□□□□□ -1.54
CHL4	YDR254W	YGR210C	P42942	411 aa		5.42	□□□□□ -1.54
CHL4	YDR254W	CIN2	P46670	268 aa		5.42	□□□□□ -1.54
CHL4	YDR254W	MSY1	P48527	492 aa		5.42	□□□□□ -1.54
CHL4	YDR254W	LYS20	P48570	428 aa	Known RBP	5.42	□□□□□ -1.54
CHL4	YDR254W	SEH1	P53011	349 aa	Known RBP	5.42	□□□□□ -1.54
CHL4	YDR254W	FHN1	P53279	174 aa		5.42	□□□□□ -1.54
CHL4	YDR254W	SNO1	Q03144	224 aa		5.42	□□□□□ -1.54
CHL4	YDR254W	YPR127W	Q06494	345 aa		5.42	□□□□□ -1.54
CHL4	YDR254W	SOR2	Q07786	357 aa		5.42	□□□□□ -1.54
CHL4	YDR254W	ERP3	Q12403	225 aa		5.42	□□□□□ -1.54
CHL4	YDR254W	HRP1	Q99383	534 aa	Known RBP	5.42	□□□□□ -1.54
CHL4	YDR254W	TAF2	P23255	1407 aa		5.42	□□□□□ -1.54
CHL4	YDR254W	PET54	P10834	293 aa		5.42	□□□□□ -1.54
CHL4	YDR254W	NAM2	P11325	894 aa		5.42	□□□□□ -1.54
CHL4	YDR254W	DPM1	P14020	267 aa	Known RBP	5.42	□□□□□ -1.54
CHL4	YDR254W	HSP30	P25619	332 aa		5.42	□□□□□ -1.54
CHL4	YDR254W	VMA5	P31412	392 aa	Known RBP	5.42	□□□□□ -1.54
CHL4	YDR254W	CYS4	P32582	507 aa	Known RBP	5.42	□□□□□ -1.54
CHL4	YDR254W	PRX1	P34227	261 aa	Known RBP	5.42	□□□□□ -1.54
CHL4	YDR254W	UPS2	P35200	230 aa		5.42	□□□□□ -1.54
CHL4	YDR254W	SHE3	P38272	425 aa	Known RBP	5.42	□□□□□ -1.54
CHL4	YDR254W	STP2	P38704	541 aa		5.42	□□□□□ -1.54
CHL4	YDR254W	ATG7	P38862	630 aa		5.42	□□□□□ -1.54
CHL4	YDR254W	LAS21	P40367	830 aa		5.42	□□□□□ -1.54
CHL4	YDR254W	IDP2	P41939	412 aa		5.42	□□□□□ -1.54
CHL4	YDR254W	AIM24	P47127	394 aa		5.42	□□□□□ -1.54
CHL4	YDR254W	YPR003C	P53394	754 aa		5.42	□□□□□ -1.54
CHL4	YDR254W	YNR066C	P53752	436 aa		5.42	□□□□□ -1.54
CHL4	YDR254W	DIG1	Q03063	452 aa	Known RBP	5.42	□□□□□ -1.54
CHL4	YDR254W	MSC1	Q03104	513 aa		5.42	□□□□□ -1.54
CHL4	YDR254W	ASR1	Q06834	288 aa		5.42	□□□□□ -1.54
CHL4	YDR254W	YPQ1	Q12010	308 aa		5.42	□□□□□ -1.54
CHL4	YDR254W	AKR2	Q12013	749 aa		5.42	□□□□□ -1.54
CHL4	YDR254W	DAS2	Q12084	232 aa		5.42	□□□□□ -1.54
CHL4	YDR254W	Q0144	Q9ZZW2	109 aa		5.42	□□□□□ -1.54
CHL4	YDR254W	COX1	P00401	534 aa		5.41	□□□□□ -1.54
CHL4	YDR254W	GCY1	P14065	312 aa	Known RBP RIP-Chip data	5.41	□□□□□ -1.54	not detected
CHL4	YDR254W	AMD2	P22580	549 aa		5.41	□□□□□ -1.54
CHL4	YDR254W	MDH3	P32419	343 aa	Known RBP RIP-Chip data	5.41	□□□□□ -1.54	not detected
CHL4	YDR254W	TIP20	P33891	701 aa		5.41	□□□□□ -1.54
CHL4	YDR254W	FMP52	P40008	231 aa		5.41	□□□□□ -1.54
CHL4	YDR254W	BMT5	P40493	336 aa		5.41	□□□□□ -1.54
CHL4	YDR254W	POP1	P41812	875 aa		5.41	□□□□□ -1.54
CHL4	YDR254W	YFH7	P43591	353 aa		5.41	□□□□□ -1.54
CHL4	YDR254W	MOG1	P47123	218 aa		5.41	□□□□□ -1.54
CHL4	YDR254W	ADO1	P47143	340 aa	Known RBP	5.41	□□□□□ -1.54
CHL4	YDR254W	PRP24	P49960	444 aa	Known RBP	5.41	□□□□□ -1.54
CHL4	YDR254W	MGA1	P53050	456 aa		5.41	□□□□□ -1.54
CHL4	YDR254W	VEL1	P53058	206 aa		5.41	□□□□□ -1.54
CHL4	YDR254W	ATG4	P53867	494 aa		5.41	□□□□□ -1.54

Retrieved 100 of 5,963 RNA–protein pairs in 18.4 ms