RNA–Protein interactions for RNA: YDR059C

UBC5, Transcript of Ubiquitin-conjugating enzyme, yeastyeast

Gene UBC5, Length 447 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBC5YDR059C GRX3Q03835 250 aa2.21□□□□□ -2.06
UBC5YDR059C PAR32Q12515 295 aaKnown RBP2.21□□□□□ -2.06
UBC5YDR059C MNE1P24720 663 aa2.2□□□□□ -2.06
UBC5YDR059C ALK2P32789 676 aaPredicted RBP2.2□□□□□ -2.06
UBC5YDR059C MDL1P33310 695 aa2.2□□□□□ -2.06
UBC5YDR059C YGP1P38616 354 aaKnown RBP2.2□□□□□ -2.06
UBC5YDR059C RRF1P38771 230 aa2.2□□□□□ -2.06
UBC5YDR059C YJR030CP47101 745 aa2.2□□□□□ -2.06
UBC5YDR059C NAS6P50086 228 aa2.2□□□□□ -2.06
UBC5YDR059C PRM1P53835 661 aa2.2□□□□□ -2.06
UBC5YDR059C NDL1Q06568 189 aa2.2□□□□□ -2.06
UBC5YDR059C NFI1Q12216 726 aa2.2□□□□□ -2.06
UBC5YDR059C CUP2P15315 225 aa2.19□□□□□ -2.06
UBC5YDR059C MRPL8P22353 238 aa2.19□□□□□ -2.06
UBC5YDR059C POT1P27796 417 aaKnown RBP RIP-Chip data2.19□□□□□ -2.06not detected
UBC5YDR059C YKR015CP36111 568 aa2.19□□□□□ -2.06
UBC5YDR059C SEC28P40509 296 aaKnown RBP2.19□□□□□ -2.06
UBC5YDR059C LCB2P40970 561 aa2.19□□□□□ -2.06
UBC5YDR059C YGR111WP53265 400 aa2.19□□□□□ -2.06
UBC5YDR059C SMD1Q02260 146 aaPredicted RBP2.19□□□□□ -2.06
UBC5YDR059C YDR541CQ03049 344 aa2.19□□□□□ -2.06
UBC5YDR059C GMC1Q04399 608 aa2.19□□□□□ -2.06
UBC5YDR059C REX3Q12090 404 aa2.19□□□□□ -2.06
UBC5YDR059C ISA2Q12425 185 aa2.19□□□□□ -2.06
UBC5YDR059C INO80P53115 1489 aa2.19□□□□□ -2.06
UBC5YDR059C PDE2P06776 526 aa2.18□□□□□ -2.06
UBC5YDR059C PUP2P32379 260 aa2.18□□□□□ -2.06
UBC5YDR059C TKL2P33315 681 aa2.18□□□□□ -2.06
UBC5YDR059C GDI1P39958 451 aaKnown RBP2.18□□□□□ -2.06
UBC5YDR059C EFM4P40516 257 aa2.18□□□□□ -2.06
UBC5YDR059C ZIM17P42844 174 aa2.18□□□□□ -2.06
UBC5YDR059C YJL055WP47044 245 aa2.18□□□□□ -2.06
UBC5YDR059C EFM3P47163 339 aa2.18□□□□□ -2.06
UBC5YDR059C CIK1Q01649 594 aa2.18□□□□□ -2.06
UBC5YDR059C FRE6Q12473 712 aa2.18□□□□□ -2.06
UBC5YDR059C BGL2P15703 313 aaKnown RBP2.17□□□□□ -2.06
UBC5YDR059C CPT1P17898 393 aa2.17□□□□□ -2.06
UBC5YDR059C TRX1P22217 103 aaKnown RBP2.17□□□□□ -2.06
UBC5YDR059C NAS2P40555 220 aa2.17□□□□□ -2.06
UBC5YDR059C VPS9P54787 451 aa2.17□□□□□ -2.06
UBC5YDR059C GYL1Q04322 720 aa2.17□□□□□ -2.06
UBC5YDR059C YLH47Q06493 454 aa2.17□□□□□ -2.06
UBC5YDR059C MMT2Q08970 484 aa2.17□□□□□ -2.06
UBC5YDR059C RRP36Q12481 300 aaPredicted RBP2.17□□□□□ -2.06
UBC5YDR059C VMA2P16140 517 aaKnown RBP2.16□□□□□ -2.06
UBC5YDR059C LAS1P36146 502 aaPredicted RBP2.16□□□□□ -2.06
UBC5YDR059C ADH5P38113 351 aaKnown RBP2.16□□□□□ -2.06
UBC5YDR059C SIF2P38262 535 aa2.16□□□□□ -2.06
UBC5YDR059C YMR262WP38430 313 aa2.16□□□□□ -2.06
UBC5YDR059C ECM14P38836 430 aa2.16□□□□□ -2.06
UBC5YDR059C FYV8P46949 817 aaKnown RBP2.16□□□□□ -2.06
UBC5YDR059C GPM3Q12326 303 aa2.16□□□□□ -2.06
UBC5YDR059C MDH1P17505 334 aaKnown RBP RIP-Chip data2.15□□□□□ -2.07not detected
UBC5YDR059C SSE1P32589 693 aaKnown RBP2.15□□□□□ -2.07
UBC5YDR059C LTV1P34078 463 aa2.15□□□□□ -2.07
UBC5YDR059C UIP5P36137 443 aa2.15□□□□□ -2.07
UBC5YDR059C EFM1P38732 585 aa2.15□□□□□ -2.07
UBC5YDR059C YNR068CP53754 272 aa2.15□□□□□ -2.07
UBC5YDR059C PRO2P54885 456 aaKnown RBP2.15□□□□□ -2.07
UBC5YDR059C TIM11P81449 96 aaPredicted RBP2.15□□□□□ -2.07
UBC5YDR059C SPE3Q12074 293 aaKnown RBP2.15□□□□□ -2.07
UBC5YDR059C SKS1Q12505 502 aa2.15□□□□□ -2.07
UBC5YDR059C STF1P01098 86 aa2.14□□□□□ -2.07
UBC5YDR059C RPS14AP06367 137 aaKnown RBP2.14□□□□□ -2.07
UBC5YDR059C DAP2P18962 818 aa2.14□□□□□ -2.07
UBC5YDR059C PHO84P25297 587 aaKnown RBP2.14□□□□□ -2.07
UBC5YDR059C SMI1P32566 505 aa2.14□□□□□ -2.07
UBC5YDR059C RPS14BP39516 138 aaKnown RBP2.14□□□□□ -2.07
UBC5YDR059C PCL7P40186 285 aa2.14□□□□□ -2.07
UBC5YDR059C BUD27P43573 796 aaKnown RBP RIP-Chip data2.14□□□□□ -2.07not detected
UBC5YDR059C YGL088WP53151 121 aa2.14□□□□□ -2.07
UBC5YDR059C ERV25P54837 211 aaKnown RBP2.14□□□□□ -2.07
UBC5YDR059C PML1Q07930 204 aaPredicted RBP2.14□□□□□ -2.07
UBC5YDR059C DCI1Q08558 271 aa2.14□□□□□ -2.07
UBC5YDR059C YDR018CQ12185 396 aa2.14□□□□□ -2.07
UBC5YDR059C RPN5Q12250 445 aaKnown RBP2.14□□□□□ -2.07
UBC5YDR059C PSY3Q12318 242 aa2.14□□□□□ -2.07
UBC5YDR059C RPC40P07703 335 aaKnown RBP2.13□□□□□ -2.07
UBC5YDR059C HPR1P17629 752 aaKnown RBP2.13□□□□□ -2.07
UBC5YDR059C MIG1P27705 504 aa2.13□□□□□ -2.07
UBC5YDR059C RIB7P33312 244 aa2.13□□□□□ -2.07
UBC5YDR059C PCH2P38126 564 aa2.13□□□□□ -2.07
UBC5YDR059C YSW1P38280 609 aa2.13□□□□□ -2.07
UBC5YDR059C ATG12P38316 186 aa2.13□□□□□ -2.07
UBC5YDR059C RTT105P40063 208 aa2.13□□□□□ -2.07
UBC5YDR059C MOB2P43563 287 aa2.13□□□□□ -2.07
UBC5YDR059C EOS1P53938 366 aa2.13□□□□□ -2.07
UBC5YDR059C SCS7Q03529 384 aa2.13□□□□□ -2.07
UBC5YDR059C SHS1Q07657 551 aa2.13□□□□□ -2.07
UBC5YDR059C SLM3Q12093 417 aa2.13□□□□□ -2.07
UBC5YDR059C PRP46Q12417 451 aaPredicted RBP2.13□□□□□ -2.07
UBC5YDR059C RPL1AP0CX43 217 aaKnown RBP2.12□□□□□ -2.07
UBC5YDR059C RPL1BP0CX44 217 aaKnown RBP2.12□□□□□ -2.07
UBC5YDR059C YEL043WP32618 956 aa2.12□□□□□ -2.07
UBC5YDR059C SUR1P33300 382 aa2.12□□□□□ -2.07
UBC5YDR059C YPT35P38815 214 aaKnown RBP2.12□□□□□ -2.07
UBC5YDR059C OSW5P40219 148 aa2.12□□□□□ -2.07
UBC5YDR059C SHE4P51534 789 aa2.12□□□□□ -2.07
UBC5YDR059C LAP3Q01532 483 aaKnown RBP RIP-Chip data2.12□□□□□ -2.07not detected
UBC5YDR059C TLG1Q03322 224 aa2.12□□□□□ -2.07
Retrieved 100 of 5,963 RNA–protein pairs in 23.9 ms