RNA–Protein interactions for RNA: YCR012W

PGK1, Transcript of 3-phosphoglycerate kinase, yeastyeast

Gene PGK1, Length 1,251 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PGK1YCR012W ROT1Q03691 256 aa5.61□□□□□ -1.51
PGK1YCR012W TMN2Q04562 672 aa5.61□□□□□ -1.51
PGK1YCR012W RRN11Q04712 507 aa5.61□□□□□ -1.51
PGK1YCR012W ROY1Q04847 553 aa5.61□□□□□ -1.51
PGK1YCR012W YMR315WQ04869 349 aaKnown RBP5.61□□□□□ -1.51
PGK1YCR012W FRE3Q08905 711 aa5.61□□□□□ -1.51
PGK1YCR012W VPS68Q12016 184 aa5.61□□□□□ -1.51
PGK1YCR012W TIR4Q12218 487 aaPredicted RBP5.61□□□□□ -1.51
PGK1YCR012W YOR114WQ12219 294 aa5.61□□□□□ -1.51
PGK1YCR012W TPO4Q12256 659 aa5.61□□□□□ -1.51
PGK1YCR012W PNO1Q99216 274 aaKnown RBP5.61□□□□□ -1.51
PGK1YCR012W TOR2P32600 2474 aaKnown RBP5.6□□□□□ -1.51
PGK1YCR012W MSB2P32334 1306 aa5.6□□□□□ -1.51
PGK1YCR012W QCR7P00128 127 aa5.6□□□□□ -1.51
PGK1YCR012W DSF1P0CX08 502 aa5.6□□□□□ -1.51
PGK1YCR012W YNR073CP0CX09 502 aa5.6□□□□□ -1.51
PGK1YCR012W ERD1P16151 362 aa5.6□□□□□ -1.51
PGK1YCR012W ERD2P18414 219 aa5.6□□□□□ -1.51
PGK1YCR012W RPA135P22138 1203 aaKnown RBP5.6□□□□□ -1.51
PGK1YCR012W RNA14P25298 677 aaKnown RBP5.6□□□□□ -1.51
PGK1YCR012W IMG2P25642 146 aaPredicted RBP5.6□□□□□ -1.51
PGK1YCR012W ADE1P27616 306 aa5.6□□□□□ -1.51
PGK1YCR012W MSS1P32559 526 aaPredicted RBP5.6□□□□□ -1.51
PGK1YCR012W VMA8P32610 256 aaKnown RBP5.6□□□□□ -1.51
PGK1YCR012W ORC2P32833 620 aa5.6□□□□□ -1.51
PGK1YCR012W SDS22P36047 338 aa5.6□□□□□ -1.51
PGK1YCR012W ANR2P36090 516 aaPredicted RBP5.6□□□□□ -1.51
PGK1YCR012W APL3P38065 1025 aa5.6□□□□□ -1.51
PGK1YCR012W PAU24P38155 120 aa5.6□□□□□ -1.51
PGK1YCR012W YHR097CP38809 366 aaKnown RBP5.6□□□□□ -1.51
PGK1YCR012W PEX28P38848 579 aa5.6□□□□□ -1.51
PGK1YCR012W RGA1P39083 1007 aa5.6□□□□□ -1.51
PGK1YCR012W PKP1P40530 394 aa5.6□□□□□ -1.51
PGK1YCR012W TIR3P40552 269 aa5.6□□□□□ -1.51
PGK1YCR012W PAM16P42949 149 aa5.6□□□□□ -1.51
PGK1YCR012W DPB11P47027 764 aaPredicted RBP5.6□□□□□ -1.51
PGK1YCR012W MDE1P47095 244 aa5.6□□□□□ -1.51
PGK1YCR012W AAD10P47182 288 aa5.6□□□□□ -1.51
PGK1YCR012W PMT5P52867 743 aa5.6□□□□□ -1.51
PGK1YCR012W MTO1P53070 669 aa5.6□□□□□ -1.51
PGK1YCR012W HOS2P53096 452 aaPredicted RBP5.6□□□□□ -1.51
PGK1YCR012W YGL101WP53144 215 aa5.6□□□□□ -1.51
PGK1YCR012W VOA1P53262 265 aa5.6□□□□□ -1.51
PGK1YCR012W YPL068CQ02749 293 aa5.6□□□□□ -1.51
PGK1YCR012W PRM15Q03262 622 aa5.6□□□□□ -1.51
PGK1YCR012W DML1Q03652 475 aa5.6□□□□□ -1.51
PGK1YCR012W CDA2Q06703 312 aa5.6□□□□□ -1.51
PGK1YCR012W ATG41Q12048 136 aa5.6□□□□□ -1.51
PGK1YCR012W YPR022CQ12139 1133 aa5.6□□□□□ -1.51
PGK1YCR012W APC2Q12440 853 aa5.6□□□□□ -1.51
PGK1YCR012W YGR161W-CQ3E744 92 aa5.6□□□□□ -1.51
PGK1YCR012W HRP1Q99383 534 aaKnown RBP5.6□□□□□ -1.51
PGK1YCR012W SLH1P53327 1967 aaKnown RBP5.59□□□□□ -1.51
PGK1YCR012W STT4P37297 1900 aa5.59□□□□□ -1.51
PGK1YCR012W HIS3P06633 220 aa5.59□□□□□ -1.51
PGK1YCR012W DPM1P14020 267 aaKnown RBP5.59□□□□□ -1.51
PGK1YCR012W RED1P14291 827 aa5.59□□□□□ -1.51
PGK1YCR012W BET2P20133 325 aa5.59□□□□□ -1.51
PGK1YCR012W ITR1P30605 584 aa5.59□□□□□ -1.51
PGK1YCR012W PRE4P30657 266 aa5.59□□□□□ -1.51
PGK1YCR012W ACB1P31787 87 aa5.59□□□□□ -1.51
PGK1YCR012W DOA4P32571 926 aa5.59□□□□□ -1.51
PGK1YCR012W YKL077WP36081 392 aa5.59□□□□□ -1.51
PGK1YCR012W DTR1P38125 572 aa5.59□□□□□ -1.51
PGK1YCR012W TRM7P38238 310 aaKnown RBP5.59□□□□□ -1.51
PGK1YCR012W IFA38P38286 347 aa5.59□□□□□ -1.51
PGK1YCR012W HTD2P38790 280 aaKnown RBP5.59□□□□□ -1.51
PGK1YCR012W FET3P38993 636 aa5.59□□□□□ -1.51
PGK1YCR012W NAB3P38996 802 aaKnown RBP RIP-Chip data5.59□□□□□ -1.51not detected
PGK1YCR012W PTI1P39927 425 aaPredicted RBP5.59□□□□□ -1.51
PGK1YCR012W YEL068CP39977 110 aa5.59□□□□□ -1.51
PGK1YCR012W GID8P40208 455 aa5.59□□□□□ -1.51
PGK1YCR012W MOB1P40484 314 aa5.59□□□□□ -1.51
PGK1YCR012W LSM1P47017 172 aaKnown RBP5.59□□□□□ -1.51
PGK1YCR012W AIM25P47140 327 aa5.59□□□□□ -1.51
PGK1YCR012W FAA4P47912 694 aaKnown RBP5.59□□□□□ -1.51
PGK1YCR012W UBC12P52491 188 aa5.59□□□□□ -1.51
PGK1YCR012W JAC1P53193 184 aa5.59□□□□□ -1.51
PGK1YCR012W CDH1P53197 566 aa5.59□□□□□ -1.51
PGK1YCR012W HXT11P54862 567 aa5.59□□□□□ -1.51
PGK1YCR012W ELP4Q02884 456 aaKnown RBP5.59□□□□□ -1.51
PGK1YCR012W CTL1Q03220 320 aaKnown RBP5.59□□□□□ -1.51
PGK1YCR012W NAT4Q04751 285 aa5.59□□□□□ -1.51
PGK1YCR012W XYL2Q07993 356 aa5.59□□□□□ -1.51
PGK1YCR012W SYC1Q08553 188 aaPredicted RBP5.59□□□□□ -1.51
PGK1YCR012W FEX2Q08991 375 aa5.59□□□□□ -1.51
PGK1YCR012W YOR289WQ12012 251 aaPredicted RBP5.59□□□□□ -1.51
PGK1YCR012W PUS9Q12069 462 aa5.59□□□□□ -1.51
PGK1YCR012W ATP16Q12165 160 aa5.59□□□□□ -1.51
PGK1YCR012W SKM1Q12469 655 aa5.59□□□□□ -1.51
PGK1YCR012W YKL033W-AQ86ZR7 236 aa5.59□□□□□ -1.51
PGK1YCR012W YBR085C-AO43137 85 aa5.58□□□□□ -1.52
PGK1YCR012W MDM35O60200 86 aa5.58□□□□□ -1.52
PGK1YCR012W CAN1P04817 590 aa5.58□□□□□ -1.52
PGK1YCR012W CDC9P04819 755 aa5.58□□□□□ -1.52
PGK1YCR012W NHP6BP11633 99 aaKnown RBP5.58□□□□□ -1.52
PGK1YCR012W CBS1P14066 229 aa5.58□□□□□ -1.52
PGK1YCR012W RPB5P20434 215 aa5.58□□□□□ -1.52
PGK1YCR012W MCK1P21965 375 aaKnown RBP5.58□□□□□ -1.52
PGK1YCR012W HCM1P25364 564 aa5.58□□□□□ -1.52
Retrieved 100 of 5,963 RNA–protein pairs in 15.7 ms