RNA–Protein interactions for RNA: YBL066C

SEF1, Transcript of Putative transcription factor, yeastyeast

Gene SEF1, Length 3,447 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SEF1YBL066C CRH1P53301 507 aa1.65□□□□□ -2.14
SEF1YBL066C TRM112P53738 135 aaPredicted RBP1.65□□□□□ -2.14
SEF1YBL066C ALF1P53904 254 aa1.65□□□□□ -2.14
SEF1YBL066C PRM6Q04705 352 aa1.65□□□□□ -2.14
SEF1YBL066C YFH1Q07540 174 aa1.65□□□□□ -2.14
SEF1YBL066C CMS1Q07897 291 aaKnown RBP1.65□□□□□ -2.14
SEF1YBL066C APE4P38821 490 aa1.65□□□□□ -2.15
SEF1YBL066C ATG18P43601 500 aa1.65□□□□□ -2.15
SEF1YBL066C ADD37Q03233 198 aa1.65□□□□□ -2.15
SEF1YBL066C MFG1Q07684 458 aa1.65□□□□□ -2.15
SEF1YBL066C FCY22Q12119 530 aa1.65□□□□□ -2.15
SEF1YBL066C MSP1P28737 362 aa1.65□□□□□ -2.15
SEF1YBL066C SWI3P32591 825 aa1.65□□□□□ -2.15
SEF1YBL066C SPT10P35208 640 aa1.65□□□□□ -2.15
SEF1YBL066C DAD2P36162 133 aa1.65□□□□□ -2.15
SEF1YBL066C EOS1P53938 366 aa1.65□□□□□ -2.15
SEF1YBL066C YPR091CQ06833 770 aa1.65□□□□□ -2.15
SEF1YBL066C TFB5Q3E7C1 72 aaPredicted RBP1.65□□□□□ -2.15
SEF1YBL066C SCH9P11792 824 aaKnown RBP1.64□□□□□ -2.15
SEF1YBL066C AAT2P23542 418 aaKnown RBP1.64□□□□□ -2.15
SEF1YBL066C FAA1P30624 700 aaKnown RBP1.64□□□□□ -2.15
SEF1YBL066C RAD5P32849 1169 aaPredicted RBP1.64□□□□□ -2.15
SEF1YBL066C TIR2P33890 251 aa1.64□□□□□ -2.15
SEF1YBL066C ANR2P36090 516 aaPredicted RBP1.64□□□□□ -2.15
SEF1YBL066C ADH5P38113 351 aaKnown RBP1.64□□□□□ -2.15
SEF1YBL066C BAT1P38891 393 aaKnown RBP1.64□□□□□ -2.15
SEF1YBL066C OXA1P39952 402 aa1.64□□□□□ -2.15
SEF1YBL066C YGL039WP53183 348 aaKnown RBP1.64□□□□□ -2.15
SEF1YBL066C YDL114WQ07530 308 aa1.64□□□□□ -2.15
SEF1YBL066C POT1P27796 417 aaKnown RBP RIP-Chip data1.64□□□□□ -2.15not detected
SEF1YBL066C PRR1P28708 518 aa1.64□□□□□ -2.15
SEF1YBL066C PSO2P30620 661 aa1.64□□□□□ -2.15
SEF1YBL066C ECM8P38246 354 aa1.64□□□□□ -2.15
SEF1YBL066C VAB2P40003 282 aa1.64□□□□□ -2.15
SEF1YBL066C HTZ1Q12692 134 aaKnown RBP1.64□□□□□ -2.15
SEF1YBL066C PCL1P24867 279 aa1.63□□□□□ -2.15
SEF1YBL066C FUN26P31381 517 aa1.63□□□□□ -2.15
SEF1YBL066C GDT1P38301 280 aaPredicted RBP1.63□□□□□ -2.15
SEF1YBL066C TSA2Q04120 196 aa1.63□□□□□ -2.15
SEF1YBL066C LIP2Q06005 328 aa1.63□□□□□ -2.15
SEF1YBL066C UBA1P22515 1024 aaKnown RBP1.63□□□□□ -2.15
SEF1YBL066C VPH1P32563 840 aaKnown RBP1.63□□□□□ -2.15
SEF1YBL066C LAS1P36146 502 aaPredicted RBP1.63□□□□□ -2.15
SEF1YBL066C YNL208WP40159 199 aaKnown RBP1.63□□□□□ -2.15
SEF1YBL066C CLD1P53264 445 aa1.63□□□□□ -2.15
SEF1YBL066C HAL1Q01766 294 aa1.63□□□□□ -2.15
SEF1YBL066C YET2Q04210 160 aa1.63□□□□□ -2.15
SEF1YBL066C YPR078CQ06813 372 aa1.63□□□□□ -2.15
SEF1YBL066C NFI1Q12216 726 aa1.63□□□□□ -2.15
SEF1YBL066C YDL199CQ12407 687 aa1.63□□□□□ -2.15
SEF1YBL066C NAG1Q8TGN9 163 aa1.63□□□□□ -2.15
SEF1YBL066C PHO84P25297 587 aaKnown RBP1.63□□□□□ -2.15
SEF1YBL066C SPO23P33757 523 aa1.63□□□□□ -2.15
SEF1YBL066C UTH1P36135 365 aa1.63□□□□□ -2.15
SEF1YBL066C SEC27P41811 889 aaKnown RBP1.63□□□□□ -2.15
SEF1YBL066C YNR068CP53754 272 aa1.63□□□□□ -2.15
SEF1YBL066C PCL9Q12477 304 aa1.63□□□□□ -2.15
SEF1YBL066C SFG1Q12507 346 aa1.63□□□□□ -2.15
SEF1YBL066C PRP8P33334 2413 aaKnown RBP1.63□□□□□ -2.15
SEF1YBL066C GAT3Q07928 141 aa1.62□□□□□ -2.15
SEF1YBL066C PEX27Q08580 376 aa1.62□□□□□ -2.15
SEF1YBL066C MEX67Q99257 599 aaKnown RBP1.62□□□□□ -2.15
SEF1YBL066C DBR1P24309 405 aaKnown RBP1.62□□□□□ -2.15
SEF1YBL066C CDC50P25656 391 aa1.62□□□□□ -2.15
SEF1YBL066C YER186CP40101 306 aa1.62□□□□□ -2.15
SEF1YBL066C DFG10P40526 253 aa1.62□□□□□ -2.15
SEF1YBL066C RET3P53600 189 aa1.62□□□□□ -2.15
SEF1YBL066C UTP6Q02354 440 aaKnown RBP1.62□□□□□ -2.15
SEF1YBL066C SKI8Q02793 397 aaPredicted RBP1.62□□□□□ -2.15
SEF1YBL066C SOD1P00445 154 aaKnown RBP1.62□□□□□ -2.15
SEF1YBL066C CHA1P25379 360 aaKnown RBP1.62□□□□□ -2.15
SEF1YBL066C MSK1P32048 576 aa1.62□□□□□ -2.15
SEF1YBL066C YBL028CP38202 106 aa1.62□□□□□ -2.15
SEF1YBL066C SPL2P38839 148 aa1.62□□□□□ -2.15
SEF1YBL066C LYS12P40495 371 aaKnown RBP1.62□□□□□ -2.15
SEF1YBL066C YHC1Q05900 231 aaKnown RBP1.62□□□□□ -2.15
SEF1YBL066C YOR338WQ99326 363 aa1.62□□□□□ -2.15
SEF1YBL066C LAA1P39526 2014 aa1.61□□□□□ -2.15
SEF1YBL066C SWI1P09547 1314 aa1.61□□□□□ -2.15
SEF1YBL066C NOP1P15646 327 aaKnown RBP1.61□□□□□ -2.15
SEF1YBL066C MRPL8P22353 238 aa1.61□□□□□ -2.15
SEF1YBL066C SIF2P38262 535 aa1.61□□□□□ -2.15
SEF1YBL066C SNL1P40548 159 aa1.61□□□□□ -2.15
SEF1YBL066C KEG1P43614 200 aa1.61□□□□□ -2.15
SEF1YBL066C CTK3P46963 296 aaPredicted RBP1.61□□□□□ -2.15
SEF1YBL066C DBP9Q06218 594 aaKnown RBP1.61□□□□□ -2.15
SEF1YBL066C YOR012WQ12351 137 aa1.61□□□□□ -2.15
SEF1YBL066C RPS16AP0CX51 143 aaKnown RBP1.61□□□□□ -2.15
SEF1YBL066C RPS16BP0CX52 143 aaKnown RBP1.61□□□□□ -2.15
SEF1YBL066C PRS1P32895 427 aaKnown RBP1.61□□□□□ -2.15
SEF1YBL066C PTK1P36002 662 aaPredicted RBP1.61□□□□□ -2.15
SEF1YBL066C OM14P38325 134 aa1.61□□□□□ -2.15
SEF1YBL066C LCP5P40079 357 aaPredicted RBP1.61□□□□□ -2.15
SEF1YBL066C CIN2P46670 268 aa1.61□□□□□ -2.15
SEF1YBL066C REX2P54964 269 aaKnown RBP1.61□□□□□ -2.15
SEF1YBL066C YLH47Q06493 454 aa1.61□□□□□ -2.15
SEF1YBL066C MCT1Q12283 360 aa1.61□□□□□ -2.15
SEF1YBL066C ACC1Q00955 2233 aaKnown RBP1.61□□□□□ -2.15
SEF1YBL066C PRB1P09232 635 aa1.6□□□□□ -2.15
SEF1YBL066C HSP26P15992 214 aaKnown RBP RIP-Chip data1.6□□□□□ -2.15not detected
Retrieved 100 of 5,963 RNA–protein pairs in 9.6 ms