RNA–Protein interactions for RNA: ENST00000575426.1

LITAF-217, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 5

Gene LITAF, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-217ENST00000575426 NFX1Q12986 1120 aaKnown RBP16.92■□□□□ 0.3
LITAF-217ENST00000575426 MKRN4PQ13434 485 aaPredicted RBP16.92■□□□□ 0.3
LITAF-217ENST00000575426 DRP2Q13474 957 aa16.92■□□□□ 0.3
LITAF-217ENST00000575426 ECM1Q16610 540 aa16.92■□□□□ 0.3
LITAF-217ENST00000575426 FAM43BQ6ZT52 329 aaPredicted RBP16.92■□□□□ 0.3
LITAF-217ENST00000575426 PHOSPHO2Q8TCD6 241 aa16.92■□□□□ 0.3
LITAF-217ENST00000575426 ZNF668Q96K58 619 aaPredicted RBP16.92■□□□□ 0.3
LITAF-217ENST00000575426 SLC9A7Q96T83 725 aa16.92■□□□□ 0.3
LITAF-217ENST00000575426 MMTAG2Q9BU76 263 aaKnown RBP16.92■□□□□ 0.3
LITAF-217ENST00000575426 FTHL17Q9BXU8 183 aa16.92■□□□□ 0.3
LITAF-217ENST00000575426 OSBPL7Q9BZF2 842 aa16.92■□□□□ 0.3
LITAF-217ENST00000575426 INO80BQ9C086 356 aaPredicted RBP16.92■□□□□ 0.3
LITAF-217ENST00000575426 CDHR5Q9HBB8 845 aa16.92■□□□□ 0.3
LITAF-217ENST00000575426 SPTLC2O15270 562 aa16.91■□□□□ 0.3
LITAF-217ENST00000575426 YEATS4O95619 227 aa16.91■□□□□ 0.3
LITAF-217ENST00000575426 EYA4O95677 639 aa16.91■□□□□ 0.3
LITAF-217ENST00000575426 BRD1O95696 1058 aa16.91■□□□□ 0.3
LITAF-217ENST00000575426 AMHP03971 560 aa16.91■□□□□ 0.3
LITAF-217ENST00000575426 ATP2A2P16615 1042 aaKnown RBP16.91■□□□□ 0.3
LITAF-217ENST00000575426 EIF4BP23588 611 aaKnown RBP16.91■□□□□ 0.3
LITAF-217ENST00000575426 TXLNAP40222 546 aa16.91■□□□□ 0.3
LITAF-217ENST00000575426 NASPP49321 788 aaPredicted RBP16.91■□□□□ 0.3
LITAF-217ENST00000575426 SMAD3P84022 425 aaKnown RBP16.91■□□□□ 0.3
LITAF-217ENST00000575426 MXD4Q14582 209 aaPredicted RBP16.91■□□□□ 0.3
LITAF-217ENST00000575426 PADI6Q6TGC4 694 aa16.91■□□□□ 0.3
LITAF-217ENST00000575426 ZNF410Q86VK4 478 aa16.91■□□□□ 0.3
LITAF-217ENST00000575426 KRI1Q8N9T8 703 aaKnown RBP16.91■□□□□ 0.3
LITAF-217ENST00000575426 MCPH1Q8NEM0 835 aa16.91■□□□□ 0.3
LITAF-217ENST00000575426 PRPF31Q8WWY3 499 aaKnown RBP16.91■□□□□ 0.3
LITAF-217ENST00000575426 BHMT2Q9H2M3 363 aa16.91■□□□□ 0.3
LITAF-217ENST00000575426 ADAMTS10Q9H324 1103 aa16.91■□□□□ 0.3
LITAF-217ENST00000575426 AGO3Q9H9G7 860 aaKnown RBP16.91■□□□□ 0.3
LITAF-217ENST00000575426 CCDC39Q9UFE4 941 aa16.91■□□□□ 0.3
LITAF-217ENST00000575426 FBXO2Q9UK22 296 aaPredicted RBP16.91■□□□□ 0.3
LITAF-217ENST00000575426 PADI3Q9ULW8 664 aa16.91■□□□□ 0.3
LITAF-217ENST00000575426 NOC2LQ9Y3T9 749 aaKnown RBP16.91■□□□□ 0.3
LITAF-217ENST00000575426 COL4A3BPQ9Y5P4 624 aa16.91■□□□□ 0.3
LITAF-217ENST00000575426 MORC2Q9Y6X9 1032 aaPredicted RBP16.91■□□□□ 0.3
LITAF-217ENST00000575426 PTPRSQ13332 1948 aa16.91■□□□□ 0.3
LITAF-217ENST00000575426 A0A087WZ62 844 aa16.9■□□□□ 0.3
LITAF-217ENST00000575426 E9PMD0 336 aa16.9■□□□□ 0.3
LITAF-217ENST00000575426 SRGAP2CP0DJJ0 459 aa16.9■□□□□ 0.3
LITAF-217ENST00000575426 WDR5P61964 334 aaKnown RBP16.9■□□□□ 0.3
LITAF-217ENST00000575426 NUCB2P80303 420 aa16.9■□□□□ 0.3
LITAF-217ENST00000575426 LAMTOR4Q0VGL1 99 aa16.9■□□□□ 0.3
LITAF-217ENST00000575426 TFDP1Q14186 410 aa16.9■□□□□ 0.3
LITAF-217ENST00000575426 HYIQ5T013 277 aa16.9■□□□□ 0.3
LITAF-217ENST00000575426 MAEAQ7L5Y9 396 aa16.9■□□□□ 0.3
LITAF-217ENST00000575426 LINC00301Q8NCQ3 95 aa16.9■□□□□ 0.3
LITAF-217ENST00000575426 NLRP4Q96MN2 994 aa16.9■□□□□ 0.3
LITAF-217ENST00000575426 PLIN2Q99541 437 aa16.9■□□□□ 0.3
LITAF-217ENST00000575426 FDXACB1Q9BRP7 624 aaPredicted RBP16.9■□□□□ 0.3
LITAF-217ENST00000575426 CSRNP2Q9H175 543 aa16.9■□□□□ 0.3
LITAF-217ENST00000575426 MSRAQ9UJ68 235 aa16.9■□□□□ 0.3
LITAF-217ENST00000575426 PPP6R2O75170 966 aa16.89■□□□□ 0.29
LITAF-217ENST00000575426 SSBP05455 408 aaKnown RBP eCLIP16.89■□□□□ 0.29
LITAF-217ENST00000575426 DARSP14868 501 aaKnown RBP16.89■□□□□ 0.29
LITAF-217ENST00000575426 CYP11B2P19099 503 aa16.89■□□□□ 0.29
LITAF-217ENST00000575426 NCLP19338 710 aaKnown RBP16.89■□□□□ 0.29
LITAF-217ENST00000575426 GRIN1Q05586 938 aa16.89■□□□□ 0.29
LITAF-217ENST00000575426 GRB10Q13322 594 aa16.89■□□□□ 0.29
LITAF-217ENST00000575426 TCTN1Q2MV58 587 aa16.89■□□□□ 0.29
LITAF-217ENST00000575426 FAM102BQ5T8I3 360 aa16.89■□□□□ 0.29
LITAF-217ENST00000575426 KSR1Q8IVT5 923 aa16.89■□□□□ 0.29
LITAF-217ENST00000575426 MYOCDQ8IZQ8 938 aa16.89■□□□□ 0.29
LITAF-217ENST00000575426 TMEM40Q8WWA1 233 aa16.89■□□□□ 0.29
LITAF-217ENST00000575426 CLIC6Q96NY7 704 aa16.89■□□□□ 0.29
LITAF-217ENST00000575426 PNMA5Q96PV4 448 aa16.89■□□□□ 0.29
LITAF-217ENST00000575426 ZBED2Q9BTP6 218 aa16.89■□□□□ 0.29
LITAF-217ENST00000575426 CCSER1Q9C0I3 900 aa16.89■□□□□ 0.29
LITAF-217ENST00000575426 ERVK-5Q9HDB9 667 aa16.89■□□□□ 0.29
LITAF-217ENST00000575426 XPNPEP1Q9NQW7 623 aa16.89■□□□□ 0.29
LITAF-217ENST00000575426 ST3GAL5Q9UNP4 418 aa16.89■□□□□ 0.29
LITAF-217ENST00000575426 DENND3A2RUS2 1198 aa16.88■□□□□ 0.29
LITAF-217ENST00000575426 ZSCAN20P17040 1043 aaPredicted RBP16.88■□□□□ 0.29
LITAF-217ENST00000575426 SFPQP23246 707 aaKnown RBP eCLIP16.88■□□□□ 0.29
LITAF-217ENST00000575426 DNM1Q05193 864 aaKnown RBP16.88■□□□□ 0.29
LITAF-217ENST00000575426 RAB30Q15771 203 aa16.88■□□□□ 0.29
LITAF-217ENST00000575426 SPECC1Q5M775 1068 aa16.88■□□□□ 0.29
LITAF-217ENST00000575426 LIN28BQ6ZN17 250 aaKnown RBP eCLIP16.88■□□□□ 0.29
LITAF-217ENST00000575426 SRGAP1Q7Z6B7 1085 aa16.88■□□□□ 0.29
LITAF-217ENST00000575426 RNF149Q8NC42 400 aa16.88■□□□□ 0.29
LITAF-217ENST00000575426 KCNG4Q8TDN1 519 aa16.88■□□□□ 0.29
LITAF-217ENST00000575426 POLR3FQ9H1D9 316 aaPredicted RBP16.88■□□□□ 0.29
LITAF-217ENST00000575426 RNF216Q9NWF9 866 aaPredicted RBP16.88■□□□□ 0.29
LITAF-217ENST00000575426 TTC3P53804 2025 aa16.87■□□□□ 0.29
LITAF-217ENST00000575426 GRXCR1A8MXD5 290 aa16.87■□□□□ 0.29
LITAF-217ENST00000575426 SOX1O00570 391 aaPredicted RBP16.87■□□□□ 0.29
LITAF-217ENST00000575426 ENPP3O14638 875 aa16.87■□□□□ 0.29
LITAF-217ENST00000575426 ARL2P36404 184 aa16.87■□□□□ 0.29
LITAF-217ENST00000575426 PHKA2P46019 1235 aa16.87■□□□□ 0.29
LITAF-217ENST00000575426 FXR1P51114 621 aaKnown RBP eCLIP16.87■□□□□ 0.29
LITAF-217ENST00000575426 KRT85P78386 507 aa16.87■□□□□ 0.29
LITAF-217ENST00000575426 DEFB103AP81534 67 aa16.87■□□□□ 0.29
LITAF-217ENST00000575426 KARSQ15046 597 aaKnown RBP16.87■□□□□ 0.29
LITAF-217ENST00000575426 TMEM119Q4V9L6 283 aa16.87■□□□□ 0.29
LITAF-217ENST00000575426 FAM228AQ86W67 206 aa16.87■□□□□ 0.29
LITAF-217ENST00000575426 HERC6Q8IVU3 1022 aa16.87■□□□□ 0.29
LITAF-217ENST00000575426 SYMPKQ92797 1274 aaKnown RBP16.87■□□□□ 0.29
LITAF-217ENST00000575426 LRCH3Q96II8 777 aa16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms