RNA–Protein interactions for RNA: ENST00000424721.5

VPS8-205, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 3

Gene VPS8, Length 653 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-205ENST00000424721 TRDNQ13061 729 aa6.2□□□□□ -1.42
VPS8-205ENST00000424721 HDAC1Q13547 482 aaPredicted RBP6.2□□□□□ -1.42
VPS8-205ENST00000424721 DGKDQ16760 1214 aa6.2□□□□□ -1.42
VPS8-205ENST00000424721 IMMTQ16891 758 aaKnown RBP6.2□□□□□ -1.42
VPS8-205ENST00000424721 ASPRV1Q53RT3 343 aa6.2□□□□□ -1.42
VPS8-205ENST00000424721 ARHGEF16Q5VV41 709 aa6.2□□□□□ -1.42
VPS8-205ENST00000424721 DEFB128Q7Z7B8 93 aa6.2□□□□□ -1.42
VPS8-205ENST00000424721 FAM35AQ86V20 835 aa6.2□□□□□ -1.42
VPS8-205ENST00000424721 FBXO16Q8IX29 292 aaPredicted RBP6.2□□□□□ -1.42
VPS8-205ENST00000424721 MICALL1Q8N3F8 863 aa6.2□□□□□ -1.42
VPS8-205ENST00000424721 C7orf31Q8N865 590 aa6.2□□□□□ -1.42
VPS8-205ENST00000424721 FGD4Q96M96 766 aa6.2□□□□□ -1.42
VPS8-205ENST00000424721 CRBNQ96SW2 442 aa6.2□□□□□ -1.42
VPS8-205ENST00000424721 FRRS1LQ9P0K9 344 aa6.2□□□□□ -1.42
VPS8-205ENST00000424721 NAGPAQ9UK23 515 aa6.2□□□□□ -1.42
VPS8-205ENST00000424721 STARD13Q9Y3M8 1113 aa6.2□□□□□ -1.42
VPS8-205ENST00000424721 ABCB11O95342 1321 aa6.2□□□□□ -1.42
VPS8-205ENST00000424721 ZMYM6O95789 1325 aa6.2□□□□□ -1.42
VPS8-205ENST00000424721 DNAH12Q6ZR08 3092 aa6.19□□□□□ -1.42
VPS8-205ENST00000424721 ABHD14A-ACY1A0A1B0GW23 586 aa6.19□□□□□ -1.42
VPS8-205ENST00000424721 ERICH2A1L162 156 aa6.19□□□□□ -1.42
VPS8-205ENST00000424721 M0R082 166 aa6.19□□□□□ -1.42
VPS8-205ENST00000424721 ADCY6O43306 1168 aa6.19□□□□□ -1.42
VPS8-205ENST00000424721 NMT2O60551 498 aa6.19□□□□□ -1.42
VPS8-205ENST00000424721 PPFIA4O75335 1185 aa6.19□□□□□ -1.42
VPS8-205ENST00000424721 SMNDC1O75940 238 aaKnown RBP eCLIP6.19□□□□□ -1.42
VPS8-205ENST00000424721 ALBP02768 609 aa6.19□□□□□ -1.42
VPS8-205ENST00000424721 PARP1P09874 1014 aaKnown RBP6.19□□□□□ -1.42
VPS8-205ENST00000424721 IQCF3P0C7M6 154 aa6.19□□□□□ -1.42
VPS8-205ENST00000424721 TGFB3P10600 412 aa6.19□□□□□ -1.42
VPS8-205ENST00000424721 PDHBP11177 359 aa6.19□□□□□ -1.42
VPS8-205ENST00000424721 GNAT1P11488 350 aa6.19□□□□□ -1.42
VPS8-205ENST00000424721 TCF3P15923 654 aa6.19□□□□□ -1.42
VPS8-205ENST00000424721 DGKGP49619 791 aa6.19□□□□□ -1.42
VPS8-205ENST00000424721 CHMP4BP1P59074 171 aa6.19□□□□□ -1.42
VPS8-205ENST00000424721 IKBKEQ14164 716 aa6.19□□□□□ -1.42
VPS8-205ENST00000424721 PTGISQ16647 500 aa6.19□□□□□ -1.42
VPS8-205ENST00000424721 TTBK2Q6IQ55 1244 aa6.19□□□□□ -1.42
VPS8-205ENST00000424721 ELMSAN1Q6PJG2 1045 aa6.19□□□□□ -1.42
VPS8-205ENST00000424721 C8orf86Q6ZUL3 223 aa6.19□□□□□ -1.42
VPS8-205ENST00000424721 FBXO11Q86XK2 927 aa6.19□□□□□ -1.42
VPS8-205ENST00000424721 DHX37Q8IY37 1157 aaKnown RBP6.19□□□□□ -1.42
VPS8-205ENST00000424721 ZNF417Q8TAU3 575 aa6.19□□□□□ -1.42
VPS8-205ENST00000424721 AFAP1L1Q8TED9 768 aa6.19□□□□□ -1.42
VPS8-205ENST00000424721 NUDT8Q8WV74 236 aa6.19□□□□□ -1.42
VPS8-205ENST00000424721 ANKS1AQ92625 1134 aa6.19□□□□□ -1.42
VPS8-205ENST00000424721 SCLYQ96I15 445 aa6.19□□□□□ -1.42
VPS8-205ENST00000424721 ZNF587Q96SQ5 575 aaPredicted RBP6.19□□□□□ -1.42
VPS8-205ENST00000424721 UHRF1Q96T88 793 aaPredicted RBP6.19□□□□□ -1.42
VPS8-205ENST00000424721 RMDN3Q96TC7 470 aa6.19□□□□□ -1.42
VPS8-205ENST00000424721 UBAC1Q9BSL1 405 aa6.19□□□□□ -1.42
VPS8-205ENST00000424721 INCENPQ9NQS7 918 aa6.19□□□□□ -1.42
VPS8-205ENST00000424721 DIAPH3Q9NSV4 1193 aa6.19□□□□□ -1.42
VPS8-205ENST00000424721 ASTN1O14525 1302 aa6.19□□□□□ -1.42
VPS8-205ENST00000424721 GRIN2DO15399 1336 aa6.19□□□□□ -1.42
VPS8-205ENST00000424721 FRMPD2Q68DX3 1309 aaPredicted RBP6.19□□□□□ -1.42
VPS8-205ENST00000424721 MYH8P13535 1937 aa6.19□□□□□ -1.42
VPS8-205ENST00000424721 BAZ2AQ9UIF9 1905 aaKnown RBP6.19□□□□□ -1.42
VPS8-205ENST00000424721 J3QW42 95 aa6.18□□□□□ -1.42
VPS8-205ENST00000424721 NFIBO00712 420 aa6.18□□□□□ -1.42
VPS8-205ENST00000424721 GIPC1O14908 333 aa6.18□□□□□ -1.42
VPS8-205ENST00000424721 GADD45BO75293 160 aaPredicted RBP6.18□□□□□ -1.42
VPS8-205ENST00000424721 SNHG28P0DPA3 235 aa6.18□□□□□ -1.42
VPS8-205ENST00000424721 CYP2C9P11712 490 aa6.18□□□□□ -1.42
VPS8-205ENST00000424721 SELPP16109 830 aa6.18□□□□□ -1.42
VPS8-205ENST00000424721 SDSP20132 328 aa6.18□□□□□ -1.42
VPS8-205ENST00000424721 EDNRBP24530 442 aa6.18□□□□□ -1.42
VPS8-205ENST00000424721 GNA15P30679 374 aa6.18□□□□□ -1.42
VPS8-205ENST00000424721 RABGGTBP53611 331 aa6.18□□□□□ -1.42
VPS8-205ENST00000424721 SART3Q15020 963 aaKnown RBP6.18□□□□□ -1.42
VPS8-205ENST00000424721 USH1GQ495M9 461 aa6.18□□□□□ -1.42
VPS8-205ENST00000424721 VPS53Q5VIR6 699 aa6.18□□□□□ -1.42
VPS8-205ENST00000424721 CNKSR3Q6P9H4 555 aa6.18□□□□□ -1.42
VPS8-205ENST00000424721 SEPT14Q6ZU15 432 aa6.18□□□□□ -1.42
VPS8-205ENST00000424721 SESTD1Q86VW0 696 aa6.18□□□□□ -1.42
VPS8-205ENST00000424721 HERC6Q8IVU3 1022 aa6.18□□□□□ -1.42
VPS8-205ENST00000424721 BEND7Q8N7W2 519 aaPredicted RBP6.18□□□□□ -1.42
VPS8-205ENST00000424721 RUFY2Q8WXA3 655 aa6.18□□□□□ -1.42
VPS8-205ENST00000424721 CLEC4DQ8WXI8 215 aa6.18□□□□□ -1.42
VPS8-205ENST00000424721 TNPO1Q92973 898 aaKnown RBP6.18□□□□□ -1.42
VPS8-205ENST00000424721 SCARF2Q96GP6 870 aaPredicted RBP6.18□□□□□ -1.42
VPS8-205ENST00000424721 RAD9AQ99638 391 aa6.18□□□□□ -1.42
VPS8-205ENST00000424721 DUSP9Q99956 384 aaKnown RBP6.18□□□□□ -1.42
VPS8-205ENST00000424721 AMNQ9BXJ7 453 aa6.18□□□□□ -1.42
VPS8-205ENST00000424721 VAT1LQ9HCJ6 419 aa6.18□□□□□ -1.42
VPS8-205ENST00000424721 TRMT13Q9NUP7 481 aaKnown RBP6.18□□□□□ -1.42
VPS8-205ENST00000424721 MKL2Q9ULH7 1088 aa6.18□□□□□ -1.42
VPS8-205ENST00000424721 A0A0G2JMZ2 1700 aa6.18□□□□□ -1.42
VPS8-205ENST00000424721 CCDC171Q6TFL3 1326 aa6.18□□□□□ -1.42
VPS8-205ENST00000424721 EMSYQ7Z589 1322 aa6.18□□□□□ -1.42
VPS8-205ENST00000424721 COL6A3P12111 3177 aa6.17□□□□□ -1.42
VPS8-205ENST00000424721 NCK2O43639 380 aa6.17□□□□□ -1.42
VPS8-205ENST00000424721 STAM2O75886 525 aa6.17□□□□□ -1.42
VPS8-205ENST00000424721 CFBP00751 764 aa6.17□□□□□ -1.42
VPS8-205ENST00000424721 RRP1P56182 461 aaKnown RBP6.17□□□□□ -1.42
VPS8-205ENST00000424721 HAND2P61296 217 aa6.17□□□□□ -1.42
VPS8-205ENST00000424721 NMIQ13287 307 aaPredicted RBP6.17□□□□□ -1.42
VPS8-205ENST00000424721 PTPROQ16827 1216 aa6.17□□□□□ -1.42
VPS8-205ENST00000424721 GNPTABQ3T906 1256 aa6.17□□□□□ -1.42
VPS8-205ENST00000424721 PERM1Q5SV97 790 aa6.17□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms