RNA–Protein interactions for RNA: YPR066W

UBA3, Transcript of Protein that activates Rub1p (NEDD8) before neddylation, yeast

Gene UBA3, Length 900 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
UBA3	YPR066W	YMR034C	Q05131	434 aa	Predicted RBP	4.78	□□□□□ -1.64
UBA3	YPR066W	SLD7	Q08457	257 aa		4.78	□□□□□ -1.64
UBA3	YPR066W	RMD5	Q12508	421 aa		4.78	□□□□□ -1.64
UBA3	YPR066W	PMR1	P13586	950 aa		4.77	□□□□□ -1.65
UBA3	YPR066W	NIP1	P32497	812 aa	Known RBP	4.77	□□□□□ -1.65
UBA3	YPR066W	ASK1	P35734	292 aa		4.77	□□□□□ -1.65
UBA3	YPR066W	SRX1	P36077	127 aa		4.77	□□□□□ -1.65
UBA3	YPR066W	DAD2	P36162	133 aa		4.77	□□□□□ -1.65
UBA3	YPR066W	ADH5	P38113	351 aa	Known RBP	4.77	□□□□□ -1.65
UBA3	YPR066W	RRN10	P38204	145 aa		4.77	□□□□□ -1.65
UBA3	YPR066W	YBP1	P38315	674 aa		4.77	□□□□□ -1.65
UBA3	YPR066W	BAT1	P38891	393 aa	Known RBP	4.77	□□□□□ -1.65
UBA3	YPR066W	YAT2	P40017	923 aa		4.77	□□□□□ -1.65
UBA3	YPR066W	GLG2	P47011	380 aa		4.77	□□□□□ -1.65
UBA3	YPR066W	PRM1	P53835	661 aa		4.77	□□□□□ -1.65
UBA3	YPR066W	DSL1	P53847	754 aa		4.77	□□□□□ -1.65
UBA3	YPR066W	VAC7	P53950	1165 aa		4.77	□□□□□ -1.65
UBA3	YPR066W	YDR415C	Q04033	374 aa	Predicted RBP	4.77	□□□□□ -1.65
UBA3	YPR066W	MRPL51	Q06090	140 aa	Predicted RBP	4.77	□□□□□ -1.65
UBA3	YPR066W	CMS1	Q07897	291 aa	Known RBP	4.77	□□□□□ -1.65
UBA3	YPR066W	YDL009C	Q12210	107 aa		4.77	□□□□□ -1.65
UBA3	YPR066W	POL2	P21951	2222 aa	Known RBP	4.77	□□□□□ -1.65
UBA3	YPR066W	RPI1	P23250	407 aa	Known RBP	4.76	□□□□□ -1.65
UBA3	YPR066W	SPC110	P32380	944 aa		4.76	□□□□□ -1.65
UBA3	YPR066W	RIM1	P32445	135 aa	Known RBP	4.76	□□□□□ -1.65
UBA3	YPR066W	APE2	P32454	952 aa	Known RBP	4.76	□□□□□ -1.65
UBA3	YPR066W	ECM25	P32525	599 aa		4.76	□□□□□ -1.65
UBA3	YPR066W	MMS21	P38632	267 aa		4.76	□□□□□ -1.65
UBA3	YPR066W	RRP4	P38792	359 aa	Known RBP	4.76	□□□□□ -1.65
UBA3	YPR066W	PCF11	P39081	626 aa	Predicted RBP	4.76	□□□□□ -1.65
UBA3	YPR066W	NBP35	P52920	328 aa		4.76	□□□□□ -1.65
UBA3	YPR066W	PCP1	P53259	346 aa		4.76	□□□□□ -1.65
UBA3	YPR066W	YEH2	Q07950	538 aa		4.76	□□□□□ -1.65
UBA3	YPR066W	CLP1	Q08685	445 aa	Predicted RBP	4.76	□□□□□ -1.65
UBA3	YPR066W	RAD3	P06839	778 aa		4.75	□□□□□ -1.65
UBA3	YPR066W	YML002W	P0CF17	737 aa		4.75	□□□□□ -1.65
UBA3	YPR066W	SLY1	P22213	666 aa		4.75	□□□□□ -1.65
UBA3	YPR066W	TOA1	P32773	286 aa		4.75	□□□□□ -1.65
UBA3	YPR066W	SIP2	P34164	415 aa	Known RBP	4.75	□□□□□ -1.65
UBA3	YPR066W	MRPL40	P36534	297 aa		4.75	□□□□□ -1.65
UBA3	YPR066W	SPC97	P38863	823 aa		4.75	□□□□□ -1.65
UBA3	YPR066W	ISC1	P40015	477 aa	Known RBP	4.75	□□□□□ -1.65
UBA3	YPR066W	TIF34	P40217	347 aa	Known RBP	4.75	□□□□□ -1.65
UBA3	YPR066W	YPS6	P40583	537 aa		4.75	□□□□□ -1.65
UBA3	YPR066W	TES1	P41903	349 aa	Known RBP	4.75	□□□□□ -1.65
UBA3	YPR066W	SCW4	P53334	386 aa	Known RBP	4.75	□□□□□ -1.65
UBA3	YPR066W	FRE4	P53746	719 aa		4.75	□□□□□ -1.65
UBA3	YPR066W	MEH1	Q02205	184 aa		4.75	□□□□□ -1.65
UBA3	YPR066W	IRC15	Q02733	499 aa		4.75	□□□□□ -1.65
UBA3	YPR066W	RPN9	Q04062	393 aa	Known RBP	4.75	□□□□□ -1.65
UBA3	YPR066W	YMR114C	Q04471	368 aa	Known RBP	4.75	□□□□□ -1.65
UBA3	YPR066W	EFG1	Q3E705	233 aa	Known RBP	4.75	□□□□□ -1.65
UBA3	YPR066W	GCN1	P33892	2672 aa	Known RBP	4.75	□□□□□ -1.65
UBA3	YPR066W	EXO70	P19658	623 aa		4.74	□□□□□ -1.65
UBA3	YPR066W	CKI1	P20485	582 aa		4.74	□□□□□ -1.65
UBA3	YPR066W	FRE2	P36033	711 aa		4.74	□□□□□ -1.65
UBA3	YPR066W	ARC40	P38328	384 aa	Known RBP	4.74	□□□□□ -1.65
UBA3	YPR066W	MSG5	P38590	489 aa		4.74	□□□□□ -1.65
UBA3	YPR066W	YPT35	P38815	214 aa	Known RBP	4.74	□□□□□ -1.65
UBA3	YPR066W	WSS1	P38838	269 aa		4.74	□□□□□ -1.65
UBA3	YPR066W	YFL012W	P43580	148 aa		4.74	□□□□□ -1.65
UBA3	YPR066W	BUD13	P46947	266 aa	Predicted RBP	4.74	□□□□□ -1.65
UBA3	YPR066W	NUP84	P52891	726 aa		4.74	□□□□□ -1.65
UBA3	YPR066W	COG7	P53195	279 aa		4.74	□□□□□ -1.65
UBA3	YPR066W	SML1	Q04964	104 aa		4.74	□□□□□ -1.65
UBA3	YPR066W	NDL1	Q06568	189 aa		4.74	□□□□□ -1.65
UBA3	YPR066W	VAC14	Q06708	880 aa		4.74	□□□□□ -1.65
UBA3	YPR066W	GEP3	Q08622	556 aa		4.74	□□□□□ -1.65
UBA3	YPR066W	CBF1	P17106	351 aa		4.73	□□□□□ -1.65
UBA3	YPR066W	RBK1	P25332	333 aa		4.73	□□□□□ -1.65
UBA3	YPR066W	YCR043C	P25361	127 aa		4.73	□□□□□ -1.65
UBA3	YPR066W	YCR022C	P25620	114 aa		4.73	□□□□□ -1.65
UBA3	YPR066W	ATO2	P32907	282 aa		4.73	□□□□□ -1.65
UBA3	YPR066W	EBP2	P36049	427 aa	Known RBP	4.73	□□□□□ -1.65
UBA3	YPR066W	MRPL4	P36517	319 aa		4.73	□□□□□ -1.65
UBA3	YPR066W	TAE1	P38340	232 aa		4.73	□□□□□ -1.65
UBA3	YPR066W	GPI16	P38875	610 aa		4.73	□□□□□ -1.65
UBA3	YPR066W	YNL247W	P53852	767 aa	Known RBP	4.73	□□□□□ -1.65
UBA3	YPR066W	ENT5	Q03769	411 aa	Known RBP	4.73	□□□□□ -1.65
UBA3	YPR066W	SNT309	Q06091	175 aa	Predicted RBP	4.73	□□□□□ -1.65
UBA3	YPR066W	DBP9	Q06218	594 aa	Known RBP	4.73	□□□□□ -1.65
UBA3	YPR066W	VPS74	Q06385	345 aa		4.73	□□□□□ -1.65
UBA3	YPR066W	ATG10	Q07879	167 aa		4.73	□□□□□ -1.65
UBA3	YPR066W	RPL6B	P05739	176 aa	Known RBP	4.72	□□□□□ -1.65
UBA3	YPR066W	ILV5	P06168	395 aa	Known RBP	4.72	□□□□□ -1.65
UBA3	YPR066W	PDE2	P06776	526 aa		4.72	□□□□□ -1.65
UBA3	YPR066W	SCH9	P11792	824 aa	Known RBP	4.72	□□□□□ -1.65
UBA3	YPR066W	PHO84	P25297	587 aa	Known RBP	4.72	□□□□□ -1.65
UBA3	YPR066W	CTR86	P25355	563 aa		4.72	□□□□□ -1.65
UBA3	YPR066W	AEP1	P32493	518 aa		4.72	□□□□□ -1.65
UBA3	YPR066W	SMI1	P32566	505 aa		4.72	□□□□□ -1.65
UBA3	YPR066W	GCG1	P32656	232 aa	Known RBP	4.72	□□□□□ -1.65
UBA3	YPR066W	YNK1	P36010	153 aa	Known RBP	4.72	□□□□□ -1.65
UBA3	YPR066W	YCR041W	P37265	110 aa		4.72	□□□□□ -1.65
UBA3	YPR066W	OLA1	P38219	394 aa	Known RBP	4.72	□□□□□ -1.65
UBA3	YPR066W	RRP3	P38712	501 aa	Known RBP	4.72	□□□□□ -1.65
UBA3	YPR066W	STN1	P38960	494 aa		4.72	□□□□□ -1.65
UBA3	YPR066W	SEO1	P39709	593 aa		4.72	□□□□□ -1.65
UBA3	YPR066W	YMR134W	P40207	237 aa		4.72	□□□□□ -1.65
UBA3	YPR066W	GAT2	P40209	560 aa		4.72	□□□□□ -1.65

Retrieved 100 of 5,963 RNA–protein pairs in 16 ms