RNA–Protein interactions for RNA: YPR047W

MSF1, Transcript of Mitochondrial phenylalanyl-tRNA synthetase, yeastyeast

Gene MSF1, Length 1,410 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MSF1YPR047W USE1P53146 245 aa9.21□□□□□ -0.94
MSF1YPR047W YNR068CP53754 272 aa9.21□□□□□ -0.94
MSF1YPR047W IGO1P53897 168 aa9.21□□□□□ -0.94
MSF1YPR047W SUB1P54000 292 aaKnown RBP9.21□□□□□ -0.94
MSF1YPR047W BRX1Q08235 291 aaKnown RBP9.21□□□□□ -0.94
MSF1YPR047W RDL2Q08742 149 aaKnown RBP9.21□□□□□ -0.94
MSF1YPR047W RIB2Q12362 591 aaKnown RBP9.21□□□□□ -0.94
MSF1YPR047W HEM4P06174 275 aa9.2□□□□□ -0.94
MSF1YPR047W UTR1P21373 530 aa9.2□□□□□ -0.94
MSF1YPR047W REC107P21651 314 aa9.2□□□□□ -0.94
MSF1YPR047W SSE1P32589 693 aaKnown RBP9.2□□□□□ -0.94
MSF1YPR047W YGP1P38616 354 aaKnown RBP9.2□□□□□ -0.94
MSF1YPR047W YMR144WP40214 342 aaKnown RBP9.2□□□□□ -0.94
MSF1YPR047W MET28P40573 187 aa9.2□□□□□ -0.94
MSF1YPR047W YGR201CP42936 225 aa9.2□□□□□ -0.94
MSF1YPR047W TOM22P49334 152 aa9.2□□□□□ -0.94
MSF1YPR047W YNL181WP53878 407 aa9.2□□□□□ -0.94
MSF1YPR047W YPL225WQ08971 146 aaKnown RBP9.2□□□□□ -0.94
MSF1YPR047W SCO1P23833 295 aa9.19□□□□□ -0.94
MSF1YPR047W ATP7P30902 174 aa9.19□□□□□ -0.94
MSF1YPR047W HEK2P38199 381 aaKnown RBP RIP-Chip data9.19□□□□□ -0.94not detected
MSF1YPR047W YHR180WP38868 163 aa9.19□□□□□ -0.94
MSF1YPR047W MRX1P40050 688 aa9.19□□□□□ -0.94
MSF1YPR047W RLP7P40693 322 aaKnown RBP9.19□□□□□ -0.94
MSF1YPR047W RRT8Q08219 342 aa9.19□□□□□ -0.94
MSF1YPR047W MUM3Q08750 479 aa9.19□□□□□ -0.94
MSF1YPR047W NCE102Q12207 173 aaRIP-Chip data9.19□□□□□ -0.94not detected
MSF1YPR047W ERD2P18414 219 aa9.18□□□□□ -0.94
MSF1YPR047W TSL1P38427 1098 aaKnown RBP9.18□□□□□ -0.94
MSF1YPR047W LSM4P40070 187 aaKnown RBP9.18□□□□□ -0.94
MSF1YPR047W NIT2P47016 307 aa9.18□□□□□ -0.94
MSF1YPR047W RAF1Q06891 181 aa9.18□□□□□ -0.94
MSF1YPR047W NOP12Q08208 459 aaKnown RBP9.18□□□□□ -0.94
MSF1YPR047W AVO1Q08236 1176 aa9.18□□□□□ -0.94
MSF1YPR047W YDL109CQ12103 647 aa9.18□□□□□ -0.94
MSF1YPR047W RNA1P11745 407 aaKnown RBP9.17□□□□□ -0.94
MSF1YPR047W SAN1P22470 610 aa9.17□□□□□ -0.94
MSF1YPR047W MRPL39P36533 70 aa9.17□□□□□ -0.94
MSF1YPR047W MAL32P38158 584 aa9.17□□□□□ -0.94
MSF1YPR047W YNL195CP40168 261 aa9.17□□□□□ -0.94
MSF1YPR047W LYS5P50113 272 aa9.17□□□□□ -0.94
MSF1YPR047W GRE1Q08969 168 aa9.17□□□□□ -0.94
MSF1YPR047W SFM1Q12314 213 aa9.17□□□□□ -0.94
MSF1YPR047W SUI3P09064 285 aaKnown RBP9.16□□□□□ -0.94
MSF1YPR047W YHL037CP38733 133 aa9.16□□□□□ -0.94
MSF1YPR047W YHR097CP38809 366 aaKnown RBP9.16□□□□□ -0.94
MSF1YPR047W COG3P40094 801 aa9.16□□□□□ -0.94
MSF1YPR047W HXT9P40885 567 aa9.16□□□□□ -0.94
MSF1YPR047W SNM1P40993 198 aa9.16□□□□□ -0.94
MSF1YPR047W HXT11P54862 567 aa9.16□□□□□ -0.94
MSF1YPR047W YMR265CQ03508 461 aaKnown RBP9.16□□□□□ -0.94
MSF1YPR047W ARO10Q06408 635 aa9.16□□□□□ -0.94
MSF1YPR047W PSR1Q07800 427 aa9.16□□□□□ -0.94
MSF1YPR047W RRP4P38792 359 aaKnown RBP9.15□□□□□ -0.94
MSF1YPR047W TRM5P38793 499 aa9.15□□□□□ -0.94
MSF1YPR047W YHR219WP38900 624 aa9.15□□□□□ -0.94
MSF1YPR047W YJR142WP47173 342 aa9.15□□□□□ -0.94
MSF1YPR047W BUD9P53226 547 aa9.15□□□□□ -0.94
MSF1YPR047W YNL033WP53964 284 aa9.15□□□□□ -0.94
MSF1YPR047W YNL019CP53975 284 aa9.15□□□□□ -0.94
MSF1YPR047W SVL3Q03088 825 aaKnown RBP9.15□□□□□ -0.94
MSF1YPR047W THP1Q08231 455 aa9.15□□□□□ -0.94
MSF1YPR047W UGA1P17649 471 aa9.14□□□□□ -0.95
MSF1YPR047W HIS7P33734 552 aaKnown RBP9.14□□□□□ -0.95
MSF1YPR047W SWH1P35845 1188 aa9.14□□□□□ -0.95
MSF1YPR047W RSM22P36056 628 aa9.14□□□□□ -0.95
MSF1YPR047W RSP5P39940 809 aaKnown RBP9.14□□□□□ -0.95
MSF1YPR047W RFC4P40339 323 aaKnown RBP9.14□□□□□ -0.95
MSF1YPR047W GPP1P41277 250 aaKnown RBP9.14□□□□□ -0.95
MSF1YPR047W NUP57P48837 541 aa9.14□□□□□ -0.95
MSF1YPR047W YGR126WP53274 230 aa9.14□□□□□ -0.95
MSF1YPR047W SYF2P53277 215 aaPredicted RBP9.14□□□□□ -0.95
MSF1YPR047W API2Q04413 109 aa9.14□□□□□ -0.95
MSF1YPR047W MRL1Q06815 381 aa9.14□□□□□ -0.95
MSF1YPR047W YIG1Q08956 461 aa9.14□□□□□ -0.95
MSF1YPR047W YDL199CQ12407 687 aa9.14□□□□□ -0.95
MSF1YPR047W YAL064W-BO13512 126 aa9.14□□□□□ -0.95
MSF1YPR047W RHO1P06780 209 aaKnown RBP9.14□□□□□ -0.95
MSF1YPR047W PMR1P13586 950 aa9.14□□□□□ -0.95
MSF1YPR047W PRP4P20053 465 aaKnown RBP9.14□□□□□ -0.95
MSF1YPR047W SAC1P32368 623 aaKnown RBP9.14□□□□□ -0.95
MSF1YPR047W MRP8P35719 219 aa9.14□□□□□ -0.95
MSF1YPR047W YHR218WP38899 603 aa9.14□□□□□ -0.95
MSF1YPR047W SHE4P51534 789 aa9.14□□□□□ -0.95
MSF1YPR047W MPC1P53157 130 aaKnown RBP9.14□□□□□ -0.95
MSF1YPR047W UGO1Q03327 502 aa9.14□□□□□ -0.95
MSF1YPR047W COQ11Q05892 277 aa9.14□□□□□ -0.95
MSF1YPR047W IRC19Q07843 230 aa9.14□□□□□ -0.95
MSF1YPR047W YDL180WQ12301 547 aa9.14□□□□□ -0.95
MSF1YPR047W PFK27Q12471 397 aaPredicted RBP9.14□□□□□ -0.95
MSF1YPR047W TFS1P14306 219 aa9.13□□□□□ -0.95
MSF1YPR047W HIR2P32480 875 aa9.13□□□□□ -0.95
MSF1YPR047W NUF2P33895 451 aa9.13□□□□□ -0.95
MSF1YPR047W MTC6P38849 526 aa9.13□□□□□ -0.95
MSF1YPR047W AVT7P40501 490 aa9.13□□□□□ -0.95
MSF1YPR047W VBA4Q04602 768 aaKnown RBP9.13□□□□□ -0.95
MSF1YPR047W UTP21Q06078 939 aaPredicted RBP9.13□□□□□ -0.95
MSF1YPR047W SNX3Q08826 162 aaKnown RBP9.13□□□□□ -0.95
MSF1YPR047W DBP10Q12389 995 aaKnown RBP9.13□□□□□ -0.95
MSF1YPR047W DFG16Q99234 619 aa9.13□□□□□ -0.95
Retrieved 100 of 5,963 RNA–protein pairs in 129.1 ms