RNA–Protein interactions for RNA: YPL083C

SEN54, Transcript of Subunit of the tRNA splicing endonuclease, yeast

Gene SEN54, Length 1,404 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SEN54	YPL083C	UTP25	P40498	721 aa	Known RBP	2.56	□□□□□ -2
SEN54	YPL083C	YPS6	P40583	537 aa		2.56	□□□□□ -2
SEN54	YPL083C	AZF1	P41696	914 aa		2.56	□□□□□ -2
SEN54	YPL083C	SCD6	P45978	349 aa	Known RBP RIP-Chip data	2.56	□□□□□ -2	RIP-Chip
SEN54	YPL083C	YIP1	P53039	248 aa		2.56	□□□□□ -2
SEN54	YPL083C	GPI15	P53961	229 aa		2.56	□□□□□ -2
SEN54	YPL083C	RHO4	Q00246	291 aa		2.56	□□□□□ -2
SEN54	YPL083C	COX20	Q04935	205 aa		2.56	□□□□□ -2
SEN54	YPL083C	CTS2	Q06350	511 aa		2.56	□□□□□ -2
SEN54	YPL083C	YOL075C	Q08234	1294 aa		2.56	□□□□□ -2
SEN54	YPL083C	SAM4	Q08985	325 aa	Known RBP	2.56	□□□□□ -2
SEN54	YPL083C	DAP1	Q12091	152 aa		2.56	□□□□□ -2
SEN54	YPL083C	LSP1	Q12230	341 aa	Known RBP	2.56	□□□□□ -2
SEN54	YPL083C	AIM45	Q12480	344 aa	Known RBP	2.56	□□□□□ -2
SEN54	YPL083C	MLP2	P40457	1679 aa		2.55	□□□□□ -2
SEN54	YPL083C	YSP2	Q06681	1438 aa		2.55	□□□□□ -2
SEN54	YPL083C	QCR6	P00127	147 aa		2.55	□□□□□ -2
SEN54	YPL083C	GDH1	P07262	454 aa	Known RBP	2.55	□□□□□ -2
SEN54	YPL083C	YAR066W	P0CX18	203 aa		2.55	□□□□□ -2
SEN54	YPL083C	YHR214W	P0CX19	203 aa		2.55	□□□□□ -2
SEN54	YPL083C	SPO12	P17123	173 aa		2.55	□□□□□ -2
SEN54	YPL083C	CKI1	P20485	582 aa		2.55	□□□□□ -2
SEN54	YPL083C	VPS1	P21576	704 aa	Known RBP	2.55	□□□□□ -2
SEN54	YPL083C	POP5	P28005	173 aa		2.55	□□□□□ -2
SEN54	YPL083C	ACH1	P32316	526 aa		2.55	□□□□□ -2
SEN54	YPL083C	ARO4	P32449	370 aa	Known RBP	2.55	□□□□□ -2
SEN54	YPL083C	ERG1	P32476	496 aa	Known RBP	2.55	□□□□□ -2
SEN54	YPL083C	KRE6	P32486	720 aa		2.55	□□□□□ -2
SEN54	YPL083C	SRB4	P32569	687 aa		2.55	□□□□□ -2
SEN54	YPL083C	CAB3	P36076	571 aa		2.55	□□□□□ -2
SEN54	YPL083C	PHD1	P36093	366 aa		2.55	□□□□□ -2
SEN54	YPL083C	YPK3	P38070	525 aa		2.55	□□□□□ -2
SEN54	YPL083C	TAE1	P38340	232 aa		2.55	□□□□□ -2
SEN54	YPL083C	YHR122W	P38829	231 aa		2.55	□□□□□ -2
SEN54	YPL083C	LYS1	P38998	373 aa	RIP-Chip data	2.55	□□□□□ -2	not detected
SEN54	YPL083C	FHL1	P39521	936 aa		2.55	□□□□□ -2
SEN54	YPL083C	FAU1	P40099	211 aa		2.55	□□□□□ -2
SEN54	YPL083C	SEC9	P40357	651 aa		2.55	□□□□□ -2
SEN54	YPL083C	GCN20	P43535	752 aa	Known RBP	2.55	□□□□□ -2
SEN54	YPL083C	SSN8	P47821	323 aa		2.55	□□□□□ -2
SEN54	YPL083C	TIM21	P53220	239 aa		2.55	□□□□□ -2
SEN54	YPL083C	RET3	P53600	189 aa		2.55	□□□□□ -2
SEN54	YPL083C	SPP2	Q02521	185 aa		2.55	□□□□□ -2
SEN54	YPL083C	CTL1	Q03220	320 aa	Known RBP	2.55	□□□□□ -2
SEN54	YPL083C	BET5	Q03630	159 aa		2.55	□□□□□ -2
SEN54	YPL083C	RTN1	Q04947	295 aa	Known RBP	2.55	□□□□□ -2
SEN54	YPL083C	SSQ1	Q05931	657 aa	Predicted RBP	2.55	□□□□□ -2
SEN54	YPL083C	SNT309	Q06091	175 aa	Predicted RBP	2.55	□□□□□ -2
SEN54	YPL083C	YPR022C	Q12139	1133 aa		2.55	□□□□□ -2
SEN54	YPL083C	ATG34	Q12292	412 aa		2.55	□□□□□ -2
SEN54	YPL083C	PRP46	Q12417	451 aa	Predicted RBP	2.55	□□□□□ -2
SEN54	YPL083C	CHC1	P22137	1653 aa	Known RBP	2.55	□□□□□ -2
SEN54	YPL083C	SUC2	P00724	532 aa		2.54	□□□□□ -2
SEN54	YPL083C	CDC36	P06100	191 aa	Predicted RBP	2.54	□□□□□ -2
SEN54	YPL083C	ATP1	P07251	545 aa	Known RBP	2.54	□□□□□ -2
SEN54	YPL083C	MXR2	P25566	168 aa		2.54	□□□□□ -2
SEN54	YPL083C	BUB3	P26449	341 aa		2.54	□□□□□ -2
SEN54	YPL083C	FRE2	P36033	711 aa		2.54	□□□□□ -2
SEN54	YPL083C	YKR015C	P36111	568 aa		2.54	□□□□□ -2
SEN54	YPL083C	KRE9	P39005	276 aa		2.54	□□□□□ -2
SEN54	YPL083C	FAA2	P39518	744 aa		2.54	□□□□□ -2
SEN54	YPL083C	YAL037W	P39728	267 aa		2.54	□□□□□ -2
SEN54	YPL083C	YIR014W	P40570	242 aa		2.54	□□□□□ -2
SEN54	YPL083C	INA22	P40576	216 aa		2.54	□□□□□ -2
SEN54	YPL083C	MSS2	P40990	351 aa		2.54	□□□□□ -2
SEN54	YPL083C	MRX5	P47007	382 aa		2.54	□□□□□ -2
SEN54	YPL083C	AIM24	P47127	394 aa		2.54	□□□□□ -2
SEN54	YPL083C	FRE4	P53746	719 aa		2.54	□□□□□ -2
SEN54	YPL083C	PGA2	P53903	129 aa		2.54	□□□□□ -2
SEN54	YPL083C	NUP100	Q02629	959 aa		2.54	□□□□□ -2
SEN54	YPL083C	SLD5	Q03406	294 aa		2.54	□□□□□ -2
SEN54	YPL083C	RVB1	Q03940	463 aa	Known RBP	2.54	□□□□□ -2
SEN54	YPL083C	NAT4	Q04751	285 aa		2.54	□□□□□ -2
SEN54	YPL083C	ERP3	Q12403	225 aa		2.54	□□□□□ -2
SEN54	YPL083C	SET6	Q12529	373 aa		2.54	□□□□□ -2
SEN54	YPL083C	YOR338W	Q99326	363 aa		2.54	□□□□□ -2
SEN54	YPL083C	VTH1	P40438	1549 aa		2.54	□□□□□ -2
SEN54	YPL083C	VTH2	P40890	1549 aa		2.54	□□□□□ -2
SEN54	YPL083C	GDB1	Q06625	1536 aa		2.54	□□□□□ -2
SEN54	YPL083C	ARG4	P04076	463 aa	Predicted RBP	2.53	□□□□□ -2
SEN54	YPL083C	RPS16A	P0CX51	143 aa	Known RBP	2.53	□□□□□ -2
SEN54	YPL083C	RPS16B	P0CX52	143 aa	Known RBP	2.53	□□□□□ -2
SEN54	YPL083C	RNA1	P11745	407 aa	Known RBP	2.53	□□□□□ -2
SEN54	YPL083C	REV1	P12689	985 aa		2.53	□□□□□ -2
SEN54	YPL083C	DAL81	P21657	970 aa		2.53	□□□□□ -2
SEN54	YPL083C	DAL2	P25335	343 aa		2.53	□□□□□ -2
SEN54	YPL083C	RPL5	P26321	297 aa	Known RBP	2.53	□□□□□ -2
SEN54	YPL083C	CWP1	P28319	239 aa		2.53	□□□□□ -2
SEN54	YPL083C	VMA5	P31412	392 aa	Known RBP	2.53	□□□□□ -2
SEN54	YPL083C	MGM101	P32787	269 aa	Known RBP	2.53	□□□□□ -2
SEN54	YPL083C	PDR3	P33200	976 aa		2.53	□□□□□ -2
SEN54	YPL083C	OSH3	P38713	996 aa	Known RBP	2.53	□□□□□ -2
SEN54	YPL083C	PET100	P38958	111 aa		2.53	□□□□□ -2
SEN54	YPL083C	PHO90	P39535	881 aa		2.53	□□□□□ -2
SEN54	YPL083C	YER085C	P40058	173 aa		2.53	□□□□□ -2
SEN54	YPL083C	BTT1	P40314	149 aa	Predicted RBP	2.53	□□□□□ -2
SEN54	YPL083C	STE24	P47154	453 aa		2.53	□□□□□ -2
SEN54	YPL083C	YDL186W	P48568	277 aa		2.53	□□□□□ -2
SEN54	YPL083C	YGL082W	P53155	381 aa		2.53	□□□□□ -2
SEN54	YPL083C	HXT11	P54862	567 aa		2.53	□□□□□ -2

Retrieved 100 of 5,963 RNA–protein pairs in 20.1 ms