RNA–Protein interactions for RNA: YOR066W

MSA1, Transcript of Activator of G1-specific transcription factors MBF and SBF, yeast

Gene MSA1, Length 1,890 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
MSA1	YOR066W	PEX32	P38292	413 aa		3.57	□□□□□ -1.84
MSA1	YOR066W	YHR131C	P38835	850 aa		3.57	□□□□□ -1.84
MSA1	YOR066W	BTT1	P40314	149 aa	Predicted RBP	3.57	□□□□□ -1.84
MSA1	YOR066W	AIP1	P46680	615 aa	Known RBP	3.57	□□□□□ -1.84
MSA1	YOR066W	VOA1	P53262	265 aa		3.57	□□□□□ -1.84
MSA1	YOR066W	ELP3	Q02908	557 aa	Known RBP	3.57	□□□□□ -1.84
MSA1	YOR066W	YLR413W	Q06689	675 aa		3.57	□□□□□ -1.84
MSA1	YOR066W	ERV2	Q12284	196 aa		3.57	□□□□□ -1.84
MSA1	YOR066W	RRP36	Q12481	300 aa	Predicted RBP	3.57	□□□□□ -1.84
MSA1	YOR066W	HHF1	P02309	103 aa	Known RBP	3.56	□□□□□ -1.84
MSA1	YOR066W	RAD1	P06777	1100 aa		3.56	□□□□□ -1.84
MSA1	YOR066W	RPS8A	P0CX39	200 aa	Known RBP	3.56	□□□□□ -1.84
MSA1	YOR066W	RPS8B	P0CX40	200 aa	Known RBP	3.56	□□□□□ -1.84
MSA1	YOR066W	PUT4	P15380	627 aa		3.56	□□□□□ -1.84
MSA1	YOR066W	RIB7	P33312	244 aa		3.56	□□□□□ -1.84
MSA1	YOR066W	BUD2	P33314	1104 aa		3.56	□□□□□ -1.84
MSA1	YOR066W	ECM8	P38246	354 aa		3.56	□□□□□ -1.84
MSA1	YOR066W	IST2	P38250	946 aa		3.56	□□□□□ -1.84
MSA1	YOR066W	IML3	P38265	245 aa		3.56	□□□□□ -1.84
MSA1	YOR066W	PTH1	P38876	190 aa	Known RBP	3.56	□□□□□ -1.84
MSA1	YOR066W	HAC1	P41546	238 aa		3.56	□□□□□ -1.84
MSA1	YOR066W	TRF5	P48561	642 aa	Known RBP	3.56	□□□□□ -1.84
MSA1	YOR066W	DBP6	P53734	629 aa	Known RBP	3.56	□□□□□ -1.84
MSA1	YOR066W	BUR2	Q05949	395 aa		3.56	□□□□□ -1.84
MSA1	YOR066W	PAA1	Q12447	191 aa	Known RBP	3.56	□□□□□ -1.84
MSA1	YOR066W	PCL9	Q12477	304 aa		3.56	□□□□□ -1.84
MSA1	YOR066W	NAM2	P11325	894 aa		3.56	□□□□□ -1.84
MSA1	YOR066W	SPT15	P13393	240 aa	Known RBP	3.56	□□□□□ -1.84
MSA1	YOR066W	POP5	P28005	173 aa		3.56	□□□□□ -1.84
MSA1	YOR066W	VMA5	P31412	392 aa	Known RBP	3.56	□□□□□ -1.84
MSA1	YOR066W	PAD1	P33751	242 aa	Known RBP RIP-Chip data	3.56	□□□□□ -1.84	not detected
MSA1	YOR066W	KEG1	P43614	200 aa		3.56	□□□□□ -1.84
MSA1	YOR066W	SCS3	P53012	380 aa		3.56	□□□□□ -1.84
MSA1	YOR066W	PNC1	P53184	216 aa	Known RBP	3.56	□□□□□ -1.84
MSA1	YOR066W	RTN1	Q04947	295 aa	Known RBP	3.56	□□□□□ -1.84
MSA1	YOR066W	VAC14	Q06708	880 aa		3.56	□□□□□ -1.84
MSA1	YOR066W	YPR091C	Q06833	770 aa		3.56	□□□□□ -1.84
MSA1	YOR066W	FCY22	Q12119	530 aa		3.56	□□□□□ -1.84
MSA1	YOR066W	MRPL23	Q12487	163 aa	Predicted RBP	3.56	□□□□□ -1.84
MSA1	YOR066W	ESP1	Q03018	1630 aa		3.55	□□□□□ -1.84
MSA1	YOR066W	CDC25	P04821	1589 aa		3.55	□□□□□ -1.84
MSA1	YOR066W	YPK9	Q12697	1472 aa		3.55	□□□□□ -1.84
MSA1	YOR066W	MSS116	P15424	664 aa	Known RBP	3.55	□□□□□ -1.84
MSA1	YOR066W	SAR1	P20606	190 aa	Known RBP	3.55	□□□□□ -1.84
MSA1	YOR066W	DEG1	P31115	442 aa	Known RBP	3.55	□□□□□ -1.84
MSA1	YOR066W	YJR085C	P47131	105 aa	Known RBP	3.55	□□□□□ -1.84
MSA1	YOR066W	NAS6	P50086	228 aa		3.55	□□□□□ -1.84
MSA1	YOR066W	RRG8	Q06109	277 aa		3.55	□□□□□ -1.84
MSA1	YOR066W	YDL114W	Q07530	308 aa		3.55	□□□□□ -1.84
MSA1	YOR066W	DCP1	Q12517	231 aa	Predicted RBP	3.55	□□□□□ -1.84
MSA1	YOR066W	CHD1	P32657	1468 aa		3.54	□□□□□ -1.84
MSA1	YOR066W	SCC2	Q04002	1493 aa		3.54	□□□□□ -1.84
MSA1	YOR066W	MKK1	P32490	508 aa		3.54	□□□□□ -1.84
MSA1	YOR066W	YHR218W	P38899	603 aa		3.54	□□□□□ -1.84
MSA1	YOR066W	UTP25	P40498	721 aa	Known RBP	3.54	□□□□□ -1.84
MSA1	YOR066W	CTK3	P46963	296 aa	Predicted RBP	3.54	□□□□□ -1.84
MSA1	YOR066W	YJR030C	P47101	745 aa		3.54	□□□□□ -1.84
MSA1	YOR066W	BOR1	P53838	576 aa		3.54	□□□□□ -1.84
MSA1	YOR066W	SPO19	Q03029	223 aa		3.54	□□□□□ -1.84
MSA1	YOR066W	ECM18	Q04623	453 aa		3.54	□□□□□ -1.84
MSA1	YOR066W	TMS1	Q12116	473 aa		3.54	□□□□□ -1.84
MSA1	YOR066W	MSI1	P13712	422 aa		3.54	□□□□□ -1.84
MSA1	YOR066W	UGA1	P17649	471 aa		3.54	□□□□□ -1.84
MSA1	YOR066W	SPO23	P33757	523 aa		3.54	□□□□□ -1.84
MSA1	YOR066W	YPT35	P38815	214 aa	Known RBP	3.54	□□□□□ -1.84
MSA1	YOR066W	CDC40	P40968	455 aa	Predicted RBP	3.54	□□□□□ -1.84
MSA1	YOR066W	SNM1	P40993	198 aa		3.54	□□□□□ -1.84
MSA1	YOR066W	YGR168C	P53293	376 aa		3.54	□□□□□ -1.84
MSA1	YOR066W	RVB1	Q03940	463 aa	Known RBP	3.54	□□□□□ -1.84
MSA1	YOR066W	CSM3	Q04659	317 aa		3.54	□□□□□ -1.84
MSA1	YOR066W	RIF2	Q06208	395 aa		3.54	□□□□□ -1.84
MSA1	YOR066W	RKR1	Q04781	1562 aa		3.53	□□□□□ -1.84
MSA1	YOR066W	RPB5	P20434	215 aa		3.53	□□□□□ -1.84
MSA1	YOR066W	DAL2	P25335	343 aa		3.53	□□□□□ -1.84
MSA1	YOR066W	RPL16A	P26784	199 aa	Known RBP	3.53	□□□□□ -1.84
MSA1	YOR066W	FUN26	P31381	517 aa		3.53	□□□□□ -1.84
MSA1	YOR066W	CSE2	P33308	149 aa		3.53	□□□□□ -1.84
MSA1	YOR066W	YKR015C	P36111	568 aa		3.53	□□□□□ -1.84
MSA1	YOR066W	AVT5	P38176	459 aa		3.53	□□□□□ -1.84
MSA1	YOR066W	PAN6	P40459	309 aa		3.53	□□□□□ -1.84
MSA1	YOR066W	REE1	P40893	198 aa		3.53	□□□□□ -1.84
MSA1	YOR066W	TAF6	P53040	516 aa		3.53	□□□□□ -1.84
MSA1	YOR066W	MST27	P53176	234 aa		3.53	□□□□□ -1.84
MSA1	YOR066W	LAP3	Q01532	483 aa	Known RBP RIP-Chip data	3.53	□□□□□ -1.84	not detected
MSA1	YOR066W	YMR010W	Q03687	405 aa		3.53	□□□□□ -1.84
MSA1	YOR066W	RPO31	P04051	1460 aa		3.53	□□□□□ -1.84
MSA1	YOR066W	GEA2	P39993	1459 aa	Known RBP	3.53	□□□□□ -1.84
MSA1	YOR066W	CAR2	P07991	424 aa	Known RBP	3.52	□□□□□ -1.85
MSA1	YOR066W	DCC1	P25559	380 aa		3.52	□□□□□ -1.85
MSA1	YOR066W	CPR3	P25719	182 aa		3.52	□□□□□ -1.85
MSA1	YOR066W	NAM9	P27929	486 aa		3.52	□□□□□ -1.85
MSA1	YOR066W	ARO2	P28777	376 aa	Known RBP	3.52	□□□□□ -1.85
MSA1	YOR066W	ERG9	P29704	444 aa		3.52	□□□□□ -1.85
MSA1	YOR066W	VPS45	P38932	577 aa		3.52	□□□□□ -1.85
MSA1	YOR066W	CIN2	P46670	268 aa		3.52	□□□□□ -1.85
MSA1	YOR066W	LOH1	P47055	219 aa		3.52	□□□□□ -1.85
MSA1	YOR066W	RPN14	P53196	417 aa		3.52	□□□□□ -1.85
MSA1	YOR066W	APC4	Q04601	652 aa		3.52	□□□□□ -1.85
MSA1	YOR066W	ERV41	Q04651	352 aa		3.52	□□□□□ -1.85
MSA1	YOR066W	HRI1	Q05905	244 aa	Known RBP	3.52	□□□□□ -1.85

Retrieved 100 of 5,963 RNA–protein pairs in 15.5 ms