RNA–Protein interactions for RNA: YOL142W

RRP40, Transcript of Exosome non-catalytic core component, yeastyeast

Gene RRP40, Length 723 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RRP40YOL142W RQC1Q05468 723 aaKnown RBP4.32□□□□□ -1.72
RRP40YOL142W MEX67Q99257 599 aaKnown RBP4.32□□□□□ -1.72
RRP40YOL142W TEF1P02994 458 aaKnown RBP4.31□□□□□ -1.72
RRP40YOL142W MET17P06106 444 aa4.31□□□□□ -1.72
RRP40YOL142W SCH9P11792 824 aaKnown RBP4.31□□□□□ -1.72
RRP40YOL142W YCR100CP25606 316 aa4.31□□□□□ -1.72
RRP40YOL142W URA7P28274 579 aaKnown RBP4.31□□□□□ -1.72
RRP40YOL142W CRM1P30822 1084 aaKnown RBP4.31□□□□□ -1.72
RRP40YOL142W PXA2P34230 853 aa4.31□□□□□ -1.72
RRP40YOL142W SPP381P38282 291 aaPredicted RBP4.31□□□□□ -1.72
RRP40YOL142W SMF2P38778 549 aa4.31□□□□□ -1.72
RRP40YOL142W PAN6P40459 309 aa4.31□□□□□ -1.72
RRP40YOL142W VMA13P41807 478 aaKnown RBP4.31□□□□□ -1.72
RRP40YOL142W YFL012WP43580 148 aa4.31□□□□□ -1.72
RRP40YOL142W TRS85P46944 698 aa4.31□□□□□ -1.72
RRP40YOL142W EMC4P53073 190 aa4.31□□□□□ -1.72
RRP40YOL142W POP6P53218 158 aa4.31□□□□□ -1.72
RRP40YOL142W KTR5P53966 522 aaPredicted RBP4.31□□□□□ -1.72
RRP40YOL142W SUB1P54000 292 aaKnown RBP4.31□□□□□ -1.72
RRP40YOL142W SLT2Q00772 484 aa4.31□□□□□ -1.72
RRP40YOL142W YMR027WQ04371 470 aa4.31□□□□□ -1.72
RRP40YOL142W CUE5Q08412 411 aaKnown RBP4.31□□□□□ -1.72
RRP40YOL142W SFI1Q12369 946 aa4.31□□□□□ -1.72
RRP40YOL142W RMD5Q12508 421 aa4.31□□□□□ -1.72
RRP40YOL142W SEN1Q00416 2231 aaKnown RBP4.3□□□□□ -1.72
RRP40YOL142W MSB2P32334 1306 aa4.3□□□□□ -1.72
RRP40YOL142W CMD1P06787 147 aaKnown RBP4.3□□□□□ -1.72
RRP40YOL142W CKA1P15790 372 aa4.3□□□□□ -1.72
RRP40YOL142W AEP1P32493 518 aa4.3□□□□□ -1.72
RRP40YOL142W SWH1P35845 1188 aa4.3□□□□□ -1.72
RRP40YOL142W OLA1P38219 394 aaKnown RBP4.3□□□□□ -1.72
RRP40YOL142W WSC4P38739 605 aa4.3□□□□□ -1.72
RRP40YOL142W SEO1P39709 593 aa4.3□□□□□ -1.72
RRP40YOL142W SMX2P40204 77 aaKnown RBP4.3□□□□□ -1.72
RRP40YOL142W NDE1P40215 560 aa4.3□□□□□ -1.72
RRP40YOL142W SER33P40510 469 aa4.3□□□□□ -1.72
RRP40YOL142W YIL067CP40514 678 aa4.3□□□□□ -1.72
RRP40YOL142W INA22P40576 216 aa4.3□□□□□ -1.72
RRP40YOL142W GLG2P47011 380 aa4.3□□□□□ -1.72
RRP40YOL142W NUP84P52891 726 aa4.3□□□□□ -1.72
RRP40YOL142W CDC14Q00684 551 aa4.3□□□□□ -1.72
RRP40YOL142W ODC1Q03028 310 aa4.3□□□□□ -1.72
RRP40YOL142W YPR114WQ06107 315 aa4.3□□□□□ -1.72
RRP40YOL142W LDB18Q07887 179 aa4.3□□□□□ -1.72
RRP40YOL142W THP3Q12049 470 aaKnown RBP4.3□□□□□ -1.72
RRP40YOL142W NUM1Q00402 2748 aa4.3□□□□□ -1.72
RRP40YOL142W RAD1P06777 1100 aa4.29□□□□□ -1.72
RRP40YOL142W YAR066WP0CX18 203 aa4.29□□□□□ -1.72
RRP40YOL142W YHR214WP0CX19 203 aa4.29□□□□□ -1.72
RRP40YOL142W HSP26P15992 214 aaKnown RBP RIP-Chip data4.29□□□□□ -1.72not detected
RRP40YOL142W MNE1P24720 663 aa4.29□□□□□ -1.72
RRP40YOL142W RBK1P25332 333 aa4.29□□□□□ -1.72
RRP40YOL142W DCC1P25559 380 aa4.29□□□□□ -1.72
RRP40YOL142W IDH2P28241 369 aaKnown RBP4.29□□□□□ -1.72
RRP40YOL142W URA10P30402 227 aa4.29□□□□□ -1.72
RRP40YOL142W NFU1P32860 256 aa4.29□□□□□ -1.72
RRP40YOL142W NAT2P37293 288 aa4.29□□□□□ -1.72
RRP40YOL142W TIM17P39515 158 aa4.29□□□□□ -1.72
RRP40YOL142W YFL067WP43537 175 aa4.29□□□□□ -1.72
RRP40YOL142W RMD9P53140 646 aaKnown RBP4.29□□□□□ -1.72
RRP40YOL142W MRPL19P53875 158 aa4.29□□□□□ -1.72
RRP40YOL142W VAC7P53950 1165 aa4.29□□□□□ -1.72
RRP40YOL142W SMA2Q04658 369 aa4.29□□□□□ -1.72
RRP40YOL142W YOR338WQ99326 363 aa4.29□□□□□ -1.72
RRP40YOL142W IRA2P19158 3079 aa4.28□□□□□ -1.72
RRP40YOL142W TOR1P35169 2470 aa4.28□□□□□ -1.72
RRP40YOL142W SPT15P13393 240 aaKnown RBP4.28□□□□□ -1.72
RRP40YOL142W YCL068CP25593 260 aa4.28□□□□□ -1.72
RRP40YOL142W BRF1P29056 596 aa4.28□□□□□ -1.72
RRP40YOL142W IMP3P32899 183 aaPredicted RBP4.28□□□□□ -1.72
RRP40YOL142W YDR131CQ03899 556 aa4.28□□□□□ -1.72
RRP40YOL142W ERV2Q12284 196 aa4.28□□□□□ -1.72
RRP40YOL142W LDB17Q12342 491 aa4.28□□□□□ -1.72
RRP40YOL142W RRP12Q12754 1228 aaKnown RBP4.28□□□□□ -1.72
RRP40YOL142W HFA1P32874 2273 aa4.28□□□□□ -1.72
RRP40YOL142W ARG4P04076 463 aaPredicted RBP4.27□□□□□ -1.73
RRP40YOL142W SPS4P09937 338 aa4.27□□□□□ -1.73
RRP40YOL142W RML2P32611 393 aa4.27□□□□□ -1.73
RRP40YOL142W YBL059WP34224 193 aa4.27□□□□□ -1.73
RRP40YOL142W RPC37P36121 282 aa4.27□□□□□ -1.73
RRP40YOL142W YCR041WP37265 110 aa4.27□□□□□ -1.73
RRP40YOL142W ETR1P38071 380 aa4.27□□□□□ -1.73
RRP40YOL142W MRP21P38175 177 aa4.27□□□□□ -1.73
RRP40YOL142W LDB7P38210 180 aa4.27□□□□□ -1.73
RRP40YOL142W YHI9P38765 294 aa4.27□□□□□ -1.73
RRP40YOL142W CCT2P39076 527 aaKnown RBP4.27□□□□□ -1.73
RRP40YOL142W COG7P53195 279 aa4.27□□□□□ -1.73
RRP40YOL142W FRE4P53746 719 aa4.27□□□□□ -1.73
RRP40YOL142W AQR1P53943 586 aa4.27□□□□□ -1.73
RRP40YOL142W RRN11Q04712 507 aa4.27□□□□□ -1.73
RRP40YOL142W CDC123Q05791 360 aa4.27□□□□□ -1.73
RRP40YOL142W TSR2Q06672 205 aaKnown RBP4.27□□□□□ -1.73
RRP40YOL142W ESA1Q08649 445 aa4.27□□□□□ -1.73
RRP40YOL142W YPL199CQ08954 240 aa4.27□□□□□ -1.73
RRP40YOL142W SLH1P53327 1967 aaKnown RBP4.26□□□□□ -1.73
RRP40YOL142W GPA2P10823 449 aa4.26□□□□□ -1.73
RRP40YOL142W NAM9P27929 486 aa4.26□□□□□ -1.73
RRP40YOL142W DEG1P31115 442 aaKnown RBP4.26□□□□□ -1.73
RRP40YOL142W REC114P32841 428 aa4.26□□□□□ -1.73
RRP40YOL142W PEX5P35056 612 aa4.26□□□□□ -1.73
Retrieved 100 of 5,963 RNA–protein pairs in 19.7 ms