RNA–Protein interactions for RNA: YMR072W

ABF2, Transcript of Mitochondrial DNA-binding protein, yeast

Gene ABF2, Length 552 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
ABF2	YMR072W	YJL055W	P47044	245 aa		0.43	□□□□□ -2.34
ABF2	YMR072W	YJR054W	P47114	497 aa		0.43	□□□□□ -2.34
ABF2	YMR072W	YGL138C	P53122	345 aa		0.43	□□□□□ -2.34
ABF2	YMR072W	CDH1	P53197	566 aa		0.43	□□□□□ -2.34
ABF2	YMR072W	MDM1	Q01846	1127 aa		0.43	□□□□□ -2.34
ABF2	YMR072W	RPL6A	Q02326	176 aa	Known RBP	0.43	□□□□□ -2.34
ABF2	YMR072W	YDR131C	Q03899	556 aa		0.43	□□□□□ -2.34
ABF2	YMR072W	IMH1	Q06704	911 aa	Known RBP	0.43	□□□□□ -2.34
ABF2	YMR072W	YRA1	Q12159	226 aa	Known RBP	0.43	□□□□□ -2.34
ABF2	YMR072W	SFI1	Q12369	946 aa		0.43	□□□□□ -2.34
ABF2	YMR072W	PRP46	Q12417	451 aa	Predicted RBP	0.43	□□□□□ -2.34
ABF2	YMR072W	YIL002W-A	Q3E7Z5	69 aa		0.43	□□□□□ -2.34
ABF2	YMR072W	DAL81	P21657	970 aa		0.42	□□□□□ -2.34
ABF2	YMR072W	OPI1	P21957	404 aa		0.42	□□□□□ -2.34
ABF2	YMR072W	TRX1	P22217	103 aa	Known RBP	0.42	□□□□□ -2.34
ABF2	YMR072W	CLB3	P24870	427 aa		0.42	□□□□□ -2.34
ABF2	YMR072W	ERG3	P32353	365 aa		0.42	□□□□□ -2.34
ABF2	YMR072W	SSE1	P32589	693 aa	Known RBP	0.42	□□□□□ -2.34
ABF2	YMR072W	TIR2	P33890	251 aa		0.42	□□□□□ -2.34
ABF2	YMR072W	LTV1	P34078	463 aa		0.42	□□□□□ -2.34
ABF2	YMR072W	SKI2	P35207	1287 aa	Known RBP RIP-Chip data	0.42	□□□□□ -2.34	not detected
ABF2	YMR072W	MCR1	P36060	302 aa	Known RBP	0.42	□□□□□ -2.34
ABF2	YMR072W	MRPL40	P36534	297 aa		0.42	□□□□□ -2.34
ABF2	YMR072W	RRF1	P38771	230 aa		0.42	□□□□□ -2.34
ABF2	YMR072W	SMF1	P38925	575 aa		0.42	□□□□□ -2.34
ABF2	YMR072W	ASP1	P38986	381 aa	Predicted RBP	0.42	□□□□□ -2.34
ABF2	YMR072W	POP2	P39008	433 aa		0.42	□□□□□ -2.34
ABF2	YMR072W	GDI1	P39958	451 aa	Known RBP	0.42	□□□□□ -2.34
ABF2	YMR072W	YIL089W	P40500	205 aa		0.42	□□□□□ -2.34
ABF2	YMR072W	EPL1	P43572	832 aa		0.42	□□□□□ -2.34
ABF2	YMR072W	HIT1	P46973	164 aa		0.42	□□□□□ -2.34
ABF2	YMR072W	MPP10	P47083	593 aa	Known RBP	0.42	□□□□□ -2.34
ABF2	YMR072W	EMC2	P47133	292 aa	Known RBP	0.42	□□□□□ -2.34
ABF2	YMR072W	SRB7	P47822	140 aa		0.42	□□□□□ -2.34
ABF2	YMR072W	NAS6	P50086	228 aa		0.42	□□□□□ -2.34
ABF2	YMR072W	ROG1	P53118	685 aa		0.42	□□□□□ -2.34
ABF2	YMR072W	CGR1	P53188	120 aa		0.42	□□□□□ -2.34
ABF2	YMR072W	PIB2	P53191	635 aa		0.42	□□□□□ -2.34
ABF2	YMR072W	YGR016W	P53209	190 aa		0.42	□□□□□ -2.34
ABF2	YMR072W	CWC22	P53333	577 aa	Known RBP	0.42	□□□□□ -2.34
ABF2	YMR072W	EOS1	P53938	366 aa		0.42	□□□□□ -2.34
ABF2	YMR072W	VPS9	P54787	451 aa		0.42	□□□□□ -2.34
ABF2	YMR072W	RPA49	Q01080	415 aa	Predicted RBP	0.42	□□□□□ -2.34
ABF2	YMR072W	ARX1	Q03862	593 aa	Known RBP	0.42	□□□□□ -2.34
ABF2	YMR072W	GYL1	Q04322	720 aa		0.42	□□□□□ -2.34
ABF2	YMR072W	GTO3	Q04806	366 aa		0.42	□□□□□ -2.34
ABF2	YMR072W	YDR341C	Q05506	607 aa	Known RBP	0.42	□□□□□ -2.34
ABF2	YMR072W	YLR287C	Q05881	355 aa		0.42	□□□□□ -2.34
ABF2	YMR072W	YDL121C	Q07541	149 aa		0.42	□□□□□ -2.34
ABF2	YMR072W	BUD21	Q08492	214 aa	Predicted RBP	0.42	□□□□□ -2.34
ABF2	YMR072W	YOR283W	Q12040	230 aa	Known RBP	0.42	□□□□□ -2.34
ABF2	YMR072W	YPR063C	Q12160	140 aa		0.42	□□□□□ -2.34
ABF2	YMR072W	RRG1	Q12167	365 aa	Predicted RBP	0.42	□□□□□ -2.34
ABF2	YMR072W	RTN2	Q12443	393 aa		0.42	□□□□□ -2.34
ABF2	YMR072W	SMC6	Q12749	1114 aa		0.42	□□□□□ -2.34
ABF2	YMR072W	HSP82	P02829	709 aa	Known RBP	0.41	□□□□□ -2.34
ABF2	YMR072W	RPC40	P07703	335 aa	Known RBP	0.41	□□□□□ -2.34
ABF2	YMR072W	MRP1	P10662	321 aa	Known RBP	0.41	□□□□□ -2.34
ABF2	YMR072W	RNA1	P11745	407 aa	Known RBP	0.41	□□□□□ -2.34
ABF2	YMR072W	CLC1	P17891	233 aa		0.41	□□□□□ -2.34
ABF2	YMR072W	RBK1	P25332	333 aa		0.41	□□□□□ -2.34
ABF2	YMR072W	RSA4	P25382	515 aa	Known RBP	0.41	□□□□□ -2.34
ABF2	YMR072W	VPH1	P32563	840 aa	Known RBP	0.41	□□□□□ -2.34
ABF2	YMR072W	SRB4	P32569	687 aa		0.41	□□□□□ -2.34
ABF2	YMR072W	MDL1	P33310	695 aa		0.41	□□□□□ -2.34
ABF2	YMR072W	EBP2	P36049	427 aa	Known RBP	0.41	□□□□□ -2.34
ABF2	YMR072W	DRE2	P36152	348 aa		0.41	□□□□□ -2.34
ABF2	YMR072W	FUI1	P38196	639 aa		0.41	□□□□□ -2.34
ABF2	YMR072W	KAP104	P38217	918 aa	Known RBP	0.41	□□□□□ -2.34
ABF2	YMR072W	SPT8	P38915	602 aa		0.41	□□□□□ -2.34
ABF2	YMR072W	YDR089W	P38966	869 aa		0.41	□□□□□ -2.34
ABF2	YMR072W	VID27	P40157	782 aa		0.41	□□□□□ -2.34
ABF2	YMR072W	MMF1	P40185	145 aa	Known RBP	0.41	□□□□□ -2.34
ABF2	YMR072W	DSN1	P40568	576 aa		0.41	□□□□□ -2.34
ABF2	YMR072W	ZIM17	P42844	174 aa		0.41	□□□□□ -2.34
ABF2	YMR072W	MRPL19	P53875	158 aa		0.41	□□□□□ -2.34
ABF2	YMR072W	CIK1	Q01649	594 aa		0.41	□□□□□ -2.34
ABF2	YMR072W	YDR114C	Q04597	100 aa		0.41	□□□□□ -2.34
ABF2	YMR072W	PEX30	Q06169	523 aa		0.41	□□□□□ -2.34
ABF2	YMR072W	SHS1	Q07657	551 aa		0.41	□□□□□ -2.34
ABF2	YMR072W	DCI1	Q08558	271 aa		0.41	□□□□□ -2.34
ABF2	YMR072W	YDR056C	Q12025	205 aa		0.41	□□□□□ -2.34
ABF2	YMR072W	MED2	Q12124	431 aa		0.41	□□□□□ -2.34
ABF2	YMR072W	MED1	Q12321	566 aa		0.41	□□□□□ -2.34
ABF2	YMR072W	TFC7	Q12415	435 aa		0.41	□□□□□ -2.34
ABF2	YMR072W	GRX6	Q12438	231 aa		0.41	□□□□□ -2.34
ABF2	YMR072W	ERP4	Q12450	207 aa		0.41	□□□□□ -2.34
ABF2	YMR072W	PFK27	Q12471	397 aa	Predicted RBP	0.41	□□□□□ -2.34
ABF2	YMR072W	MEX67	Q99257	599 aa	Known RBP	0.41	□□□□□ -2.34
ABF2	YMR072W	SAC3	P46674	1301 aa		0.4	□□□□□ -2.34
ABF2	YMR072W	ARG3	P05150	338 aa		0.4	□□□□□ -2.35
ABF2	YMR072W	MET17	P06106	444 aa		0.4	□□□□□ -2.35
ABF2	YMR072W	DST1	P07273	309 aa		0.4	□□□□□ -2.35
ABF2	YMR072W	GAL7	P08431	366 aa		0.4	□□□□□ -2.35
ABF2	YMR072W	RED1	P14291	827 aa		0.4	□□□□□ -2.35
ABF2	YMR072W	KSS1	P14681	368 aa		0.4	□□□□□ -2.35
ABF2	YMR072W	YSR3	P23501	404 aa		0.4	□□□□□ -2.35
ABF2	YMR072W	MNE1	P24720	663 aa		0.4	□□□□□ -2.35
ABF2	YMR072W	SLM5	P25345	492 aa	Known RBP	0.4	□□□□□ -2.35
ABF2	YMR072W	ITR2	P30606	609 aa		0.4	□□□□□ -2.35

Retrieved 100 of 5,963 RNA–protein pairs in 85.9 ms