RNA–Protein interactions for RNA: YLR132C

USB1, Transcript of Putative phosphodiesterase specific for U6 snRNA 3' end modification, yeastyeast

Gene USB1, Length 873 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
USB1YLR132C RPL12BP0CX54 165 aa3.52□□□□□ -1.85
USB1YLR132C CAP2P13517 287 aa3.52□□□□□ -1.85
USB1YLR132C RAD5P32849 1169 aaPredicted RBP3.52□□□□□ -1.85
USB1YLR132C SPT10P35208 640 aa3.52□□□□□ -1.85
USB1YLR132C STP2P38704 541 aa3.52□□□□□ -1.85
USB1YLR132C HAC1P41546 238 aa3.52□□□□□ -1.85
USB1YLR132C SPG5P42933 373 aa3.52□□□□□ -1.85
USB1YLR132C STE24P47154 453 aa3.52□□□□□ -1.85
USB1YLR132C MRM2P53123 320 aa3.52□□□□□ -1.85
USB1YLR132C ADA2Q02336 434 aa3.52□□□□□ -1.85
USB1YLR132C YPL107WQ02873 248 aa3.52□□□□□ -1.85
USB1YLR132C URC2Q04411 772 aa3.52□□□□□ -1.85
USB1YLR132C MDM36Q06820 579 aa3.52□□□□□ -1.85
USB1YLR132C SMC5Q08204 1093 aa3.52□□□□□ -1.85
USB1YLR132C RNH203Q12338 110 aa3.52□□□□□ -1.85
USB1YLR132C YOP1Q12402 180 aa3.52□□□□□ -1.85
USB1YLR132C PAB1P04147 577 aaKnown RBP RIP-Chip data3.51□□□□□ -1.85not detected
USB1YLR132C OPI3P05375 206 aa3.51□□□□□ -1.85
USB1YLR132C CYC3P06182 269 aa3.51□□□□□ -1.85
USB1YLR132C POX1P13711 748 aa3.51□□□□□ -1.85
USB1YLR132C OPI1P21957 404 aa3.51□□□□□ -1.85
USB1YLR132C POT1P27796 417 aaKnown RBP RIP-Chip data3.51□□□□□ -1.85not detected
USB1YLR132C DED81P38707 554 aaKnown RBP3.51□□□□□ -1.85
USB1YLR132C AIM24P47127 394 aa3.51□□□□□ -1.85
USB1YLR132C YMR102CQ03177 834 aa3.51□□□□□ -1.85
USB1YLR132C LDS2Q08218 356 aa3.51□□□□□ -1.85
USB1YLR132C FAB1P34756 2278 aa3.51□□□□□ -1.85
USB1YLR132C RPP0P05317 312 aaKnown RBP3.5□□□□□ -1.85
USB1YLR132C PHA2P32452 334 aa3.5□□□□□ -1.85
USB1YLR132C LAS1P36146 502 aaPredicted RBP3.5□□□□□ -1.85
USB1YLR132C SPP381P38282 291 aaPredicted RBP3.5□□□□□ -1.85
USB1YLR132C MSG5P38590 489 aa3.5□□□□□ -1.85
USB1YLR132C SBE22P38814 852 aa3.5□□□□□ -1.85
USB1YLR132C SIM1P40472 476 aa3.5□□□□□ -1.85
USB1YLR132C CHS6P40955 746 aa3.5□□□□□ -1.85
USB1YLR132C MPS2P53159 387 aa3.5□□□□□ -1.85
USB1YLR132C YMR010WQ03687 405 aa3.5□□□□□ -1.85
USB1YLR132C ASA1Q06822 443 aa3.5□□□□□ -1.85
USB1YLR132C RRG7Q08774 242 aaPredicted RBP3.5□□□□□ -1.85
USB1YLR132C SMF3Q12078 473 aaPredicted RBP3.5□□□□□ -1.85
USB1YLR132C TMS1Q12116 473 aa3.5□□□□□ -1.85
USB1YLR132C RVS161P25343 265 aaKnown RBP3.49□□□□□ -1.85
USB1YLR132C DPH2P32461 534 aa3.49□□□□□ -1.85
USB1YLR132C KAR9P32526 644 aa3.49□□□□□ -1.85
USB1YLR132C MCR1P36060 302 aaKnown RBP3.49□□□□□ -1.85
USB1YLR132C RFS1P38234 210 aaKnown RBP3.49□□□□□ -1.85
USB1YLR132C YSW1P38280 609 aa3.49□□□□□ -1.85
USB1YLR132C YFR057WP43625 151 aa3.49□□□□□ -1.85
USB1YLR132C CUE5Q08412 411 aaKnown RBP3.49□□□□□ -1.85
USB1YLR132C YGK3Q12222 375 aaPredicted RBP3.49□□□□□ -1.85
USB1YLR132C JID1Q12350 301 aa3.49□□□□□ -1.85
USB1YLR132C RIF1P29539 1916 aa3.48□□□□□ -1.85
USB1YLR132C RPS8AP0CX39 200 aaKnown RBP3.48□□□□□ -1.85
USB1YLR132C RPS8BP0CX40 200 aaKnown RBP3.48□□□□□ -1.85
USB1YLR132C CUP1-1P0CX80 61 aa3.48□□□□□ -1.85
USB1YLR132C CUP1-2P0CX81 61 aa3.48□□□□□ -1.85
USB1YLR132C REV1P12689 985 aa3.48□□□□□ -1.85
USB1YLR132C NAT1P12945 854 aaKnown RBP3.48□□□□□ -1.85
USB1YLR132C MRPL8P22353 238 aa3.48□□□□□ -1.85
USB1YLR132C PRR1P28708 518 aa3.48□□□□□ -1.85
USB1YLR132C YKL097CP34245 136 aa3.48□□□□□ -1.85
USB1YLR132C GEP4P38812 185 aa3.48□□□□□ -1.85
USB1YLR132C LCB3P47013 409 aa3.48□□□□□ -1.85
USB1YLR132C SDT1P53078 280 aa3.48□□□□□ -1.85
USB1YLR132C YGL039WP53183 348 aaKnown RBP3.48□□□□□ -1.85
USB1YLR132C RTN1Q04947 295 aaKnown RBP3.48□□□□□ -1.85
USB1YLR132C MRPL35Q06678 367 aa3.48□□□□□ -1.85
USB1YLR132C PEX27Q08580 376 aa3.48□□□□□ -1.85
USB1YLR132C NFI1Q12216 726 aa3.48□□□□□ -1.85
USB1YLR132C ERP3Q12403 225 aa3.48□□□□□ -1.85
USB1YLR132C NBL1Q3E7Y6 73 aa3.48□□□□□ -1.85
USB1YLR132C NUM1Q00402 2748 aa3.48□□□□□ -1.85
USB1YLR132C MSI1P13712 422 aa3.47□□□□□ -1.85
USB1YLR132C RPB5P20434 215 aa3.47□□□□□ -1.85
USB1YLR132C FAA1P30624 700 aaKnown RBP3.47□□□□□ -1.85
USB1YLR132C DBP7P36120 742 aaKnown RBP3.47□□□□□ -1.85
USB1YLR132C MRPL10P36520 322 aa3.47□□□□□ -1.85
USB1YLR132C SNL1P40548 159 aa3.47□□□□□ -1.85
USB1YLR132C RPA34P47006 233 aaPredicted RBP3.47□□□□□ -1.85
USB1YLR132C ATP22P50273 684 aaPredicted RBP3.47□□□□□ -1.85
USB1YLR132C CLD1P53264 445 aa3.47□□□□□ -1.85
USB1YLR132C CSI1Q04368 295 aa3.47□□□□□ -1.85
USB1YLR132C RIF2Q06208 395 aa3.47□□□□□ -1.85
USB1YLR132C MEX67Q99257 599 aaKnown RBP3.47□□□□□ -1.85
USB1YLR132C TOR1P35169 2470 aa3.47□□□□□ -1.85
USB1YLR132C RPS19AP07280 144 aaKnown RBP3.46□□□□□ -1.86
USB1YLR132C RPS19BP07281 144 aaPredicted RBP3.46□□□□□ -1.86
USB1YLR132C SSC1P0CS90 654 aaKnown RBP3.46□□□□□ -1.86
USB1YLR132C CLN3P13365 580 aa3.46□□□□□ -1.86
USB1YLR132C SNA3P14359 133 aa3.46□□□□□ -1.86
USB1YLR132C UBA1P22515 1024 aaKnown RBP3.46□□□□□ -1.86
USB1YLR132C YEL045CP32616 141 aa3.46□□□□□ -1.86
USB1YLR132C CSE2P33308 149 aa3.46□□□□□ -1.86
USB1YLR132C ECM8P38246 354 aa3.46□□□□□ -1.86
USB1YLR132C PHO88P38264 188 aaPredicted RBP3.46□□□□□ -1.86
USB1YLR132C CAJ1P39101 391 aa3.46□□□□□ -1.86
USB1YLR132C PMT5P52867 743 aa3.46□□□□□ -1.86
USB1YLR132C YMR027WQ04371 470 aa3.46□□□□□ -1.86
USB1YLR132C YMR321CQ04898 105 aa3.46□□□□□ -1.86
USB1YLR132C YDL144CQ07589 356 aa3.46□□□□□ -1.86
Retrieved 100 of 5,963 RNA–protein pairs in 14.7 ms