RNA–Protein interactions for RNA: YKL010C

UFD4, Transcript of Ubiquitin-protein ligase (E3), yeastyeast

Gene UFD4, Length 4,452 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UFD4YKL010C EXO84P38261 753 aa2.01□□□□□ -2.09
UFD4YKL010C MNN5P46982 586 aa2.01□□□□□ -2.09
UFD4YKL010C EFM3P47163 339 aa2.01□□□□□ -2.09
UFD4YKL010C BIO3P50277 480 aa2.01□□□□□ -2.09
UFD4YKL010C YGL204CP53089 101 aa2.01□□□□□ -2.09
UFD4YKL010C IMO32P53219 342 aa2.01□□□□□ -2.09
UFD4YKL010C SOK2P53438 785 aaPredicted RBP2.01□□□□□ -2.09
UFD4YKL010C HXT11P54862 567 aa2.01□□□□□ -2.09
UFD4YKL010C RHO4Q00246 291 aa2.01□□□□□ -2.09
UFD4YKL010C PNG1Q02890 363 aa2.01□□□□□ -2.09
UFD4YKL010C OST6Q03723 332 aa2.01□□□□□ -2.09
UFD4YKL010C MRPL1Q04599 285 aa2.01□□□□□ -2.09
UFD4YKL010C GAS2Q06135 555 aa2.01□□□□□ -2.09
UFD4YKL010C VTA1Q06263 330 aa2.01□□□□□ -2.09
UFD4YKL010C HDA2Q06629 674 aa2.01□□□□□ -2.09
UFD4YKL010C YDL086WQ07505 273 aa2.01□□□□□ -2.09
UFD4YKL010C YOL114CQ12322 202 aa2.01□□□□□ -2.09
UFD4YKL010C RKM5Q12367 367 aa2.01□□□□□ -2.09
UFD4YKL010C YKL033W-AQ86ZR7 236 aa2.01□□□□□ -2.09
UFD4YKL010C TOR2P32600 2474 aaKnown RBP2.01□□□□□ -2.09
UFD4YKL010C URK1P27515 501 aa2.01□□□□□ -2.09
UFD4YKL010C VPS17P32913 551 aa2.01□□□□□ -2.09
UFD4YKL010C NIC96P34077 839 aa2.01□□□□□ -2.09
UFD4YKL010C GLG1P36143 616 aa2.01□□□□□ -2.09
UFD4YKL010C MRPL3P36516 390 aa2.01□□□□□ -2.09
UFD4YKL010C ASC1P38011 319 aaKnown RBP2.01□□□□□ -2.09
UFD4YKL010C APL3P38065 1025 aa2.01□□□□□ -2.09
UFD4YKL010C THI2P38141 450 aa2.01□□□□□ -2.09
UFD4YKL010C YIR016WP40572 265 aa2.01□□□□□ -2.09
UFD4YKL010C VMA13P41807 478 aaKnown RBP2.01□□□□□ -2.09
UFD4YKL010C LSM7P53905 115 aaKnown RBP2.01□□□□□ -2.09
UFD4YKL010C YPL113CQ02961 396 aa2.01□□□□□ -2.09
UFD4YKL010C DLT1Q04216 342 aa2.01□□□□□ -2.09
UFD4YKL010C HLR1Q04429 423 aa2.01□□□□□ -2.09
UFD4YKL010C SMA2Q04658 369 aa2.01□□□□□ -2.09
UFD4YKL010C BUR2Q05949 395 aa2.01□□□□□ -2.09
UFD4YKL010C VPS36Q06696 566 aa2.01□□□□□ -2.09
UFD4YKL010C RRG7Q08774 242 aaPredicted RBP2.01□□□□□ -2.09
UFD4YKL010C FMP40Q08968 688 aaPredicted RBP2.01□□□□□ -2.09
UFD4YKL010C YHR213W-AQ8TGT4 77 aa2.01□□□□□ -2.09
UFD4YKL010C BRR1Q99177 341 aaPredicted RBP2.01□□□□□ -2.09
UFD4YKL010C DET1Q99288 334 aaKnown RBP2.01□□□□□ -2.09
UFD4YKL010C GLT1Q12680 2145 aaKnown RBP2□□□□□ -2.09
UFD4YKL010C SIR2P06700 562 aa2□□□□□ -2.09
UFD4YKL010C STE7P06784 515 aa2□□□□□ -2.09
UFD4YKL010C MRP1P10662 321 aaKnown RBP2□□□□□ -2.09
UFD4YKL010C FUS1P11710 512 aa2□□□□□ -2.09
UFD4YKL010C SAM35P14693 329 aa2□□□□□ -2.09
UFD4YKL010C HOP1P20050 605 aa2□□□□□ -2.09
UFD4YKL010C ATG22P25568 528 aa2□□□□□ -2.09
UFD4YKL010C SFC1P33303 322 aa2□□□□□ -2.09
UFD4YKL010C URA8P38627 578 aaPredicted RBP2□□□□□ -2.09
UFD4YKL010C GIC1P38785 314 aa2□□□□□ -2.09
UFD4YKL010C MSS4P38994 779 aa2□□□□□ -2.09
UFD4YKL010C AIM10P39965 576 aaKnown RBP2□□□□□ -2.09
UFD4YKL010C GIM4P40005 111 aaKnown RBP2□□□□□ -2.09
UFD4YKL010C OSW5P40219 148 aa2□□□□□ -2.09
UFD4YKL010C PKP1P40530 394 aa2□□□□□ -2.09
UFD4YKL010C PFA3P42836 336 aa2□□□□□ -2.09
UFD4YKL010C IRC18P47056 224 aa2□□□□□ -2.09
UFD4YKL010C NUP57P48837 541 aa2□□□□□ -2.09
UFD4YKL010C ERV29P53337 310 aa2□□□□□ -2.09
UFD4YKL010C NUP49Q02199 472 aa2□□□□□ -2.09
UFD4YKL010C GRX5Q02784 150 aa2□□□□□ -2.09
UFD4YKL010C AIM36Q03798 255 aa2□□□□□ -2.09
UFD4YKL010C SEG1Q04279 960 aa2□□□□□ -2.09
UFD4YKL010C SNT309Q06091 175 aaPredicted RBP2□□□□□ -2.09
UFD4YKL010C YDR061WQ12298 539 aa2□□□□□ -2.09
UFD4YKL010C LSO1Q3E827 93 aa2□□□□□ -2.09
UFD4YKL010C SPS2P08459 502 aa2□□□□□ -2.09
UFD4YKL010C CPR4P25334 318 aa2□□□□□ -2.09
UFD4YKL010C CDC3P32457 520 aaKnown RBP2□□□□□ -2.09
UFD4YKL010C PRP18P33411 251 aaPredicted RBP2□□□□□ -2.09
UFD4YKL010C BNA4P38169 460 aa2□□□□□ -2.09
UFD4YKL010C TRR2P38816 342 aa2□□□□□ -2.09
UFD4YKL010C SOK1P40317 901 aa2□□□□□ -2.09
UFD4YKL010C HXT9P40885 567 aa2□□□□□ -2.09
UFD4YKL010C SER2P42941 309 aa2□□□□□ -2.09
UFD4YKL010C LSM1P47017 172 aaKnown RBP2□□□□□ -2.09
UFD4YKL010C PAC10P48363 199 aa2□□□□□ -2.09
UFD4YKL010C RAD17P48581 401 aa2□□□□□ -2.09
UFD4YKL010C COS12P53053 380 aa2□□□□□ -2.09
UFD4YKL010C HOS2P53096 452 aaPredicted RBP2□□□□□ -2.09
UFD4YKL010C YGL101WP53144 215 aa2□□□□□ -2.09
UFD4YKL010C HHO1P53551 258 aa2□□□□□ -2.09
UFD4YKL010C TPS1Q00764 495 aaKnown RBP2□□□□□ -2.09
UFD4YKL010C TDA1Q03533 586 aa2□□□□□ -2.09
UFD4YKL010C RPN9Q04062 393 aaKnown RBP2□□□□□ -2.09
UFD4YKL010C ROY1Q04847 553 aa2□□□□□ -2.09
UFD4YKL010C HRP1Q99383 534 aaKnown RBP2□□□□□ -2.09
UFD4YKL010C CMP2P14747 604 aa2□□□□□ -2.09
UFD4YKL010C POL30P15873 258 aaKnown RBP2□□□□□ -2.09
UFD4YKL010C MER1P16523 270 aa2□□□□□ -2.09
UFD4YKL010C YCK1P23291 538 aa2□□□□□ -2.09
UFD4YKL010C NTG1P31378 399 aa2□□□□□ -2.09
UFD4YKL010C PET309P32522 965 aaPredicted RBP2□□□□□ -2.09
UFD4YKL010C NPL6P32832 435 aa2□□□□□ -2.09
UFD4YKL010C LRP1P38801 184 aaKnown RBP2□□□□□ -2.09
UFD4YKL010C CIN1P40987 1014 aa2□□□□□ -2.09
UFD4YKL010C YFR018CP43599 363 aa2□□□□□ -2.09
Retrieved 100 of 5,963 RNA–protein pairs in 20.7 ms