RNA–Protein interactions for RNA: YJR044C

VPS55, Transcript of Late endosomal protein involved in late endosome to vacuole transport, yeastyeast

Gene VPS55, Length 423 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS55YJR044C HNT3Q08702 217 aa1.33□□□□□ -2.2
VPS55YJR044C YDR262WQ12331 272 aa1.33□□□□□ -2.2
VPS55YJR044C RNH203Q12338 110 aa1.33□□□□□ -2.2
VPS55YJR044C SFG1Q12507 346 aa1.33□□□□□ -2.2
VPS55YJR044C YOR338WQ99326 363 aa1.33□□□□□ -2.2
VPS55YJR044C POM152P39685 1337 aa1.33□□□□□ -2.2
VPS55YJR044C RNA1P11745 407 aaKnown RBP1.32□□□□□ -2.2
VPS55YJR044C CKI1P20485 582 aa1.32□□□□□ -2.2
VPS55YJR044C ISY1P21374 235 aaPredicted RBP1.32□□□□□ -2.2
VPS55YJR044C VPS3P23643 1011 aa1.32□□□□□ -2.2
VPS55YJR044C GPI12P23797 304 aa1.32□□□□□ -2.2
VPS55YJR044C CTR86P25355 563 aa1.32□□□□□ -2.2
VPS55YJR044C SPS22P25380 463 aa1.32□□□□□ -2.2
VPS55YJR044C YCL068CP25593 260 aa1.32□□□□□ -2.2
VPS55YJR044C GEX1P25596 615 aa1.32□□□□□ -2.2
VPS55YJR044C RPL5P26321 297 aaKnown RBP1.32□□□□□ -2.2
VPS55YJR044C TIP1P27654 210 aaPredicted RBP1.32□□□□□ -2.2
VPS55YJR044C SUA5P32579 426 aa1.32□□□□□ -2.2
VPS55YJR044C ZRT1P32804 376 aa1.32□□□□□ -2.2
VPS55YJR044C MSN4P33749 630 aa1.32□□□□□ -2.2
VPS55YJR044C COY1P34237 679 aa1.32□□□□□ -2.2
VPS55YJR044C SKI2P35207 1287 aaKnown RBP RIP-Chip data1.32□□□□□ -2.2not detected
VPS55YJR044C TPO5P36029 618 aa1.32□□□□□ -2.2
VPS55YJR044C SWD3P38123 315 aa1.32□□□□□ -2.2
VPS55YJR044C RIB5P38145 238 aa1.32□□□□□ -2.2
VPS55YJR044C STP2P38704 541 aa1.32□□□□□ -2.2
VPS55YJR044C YHK8P38776 514 aa1.32□□□□□ -2.2
VPS55YJR044C ATG7P38862 630 aa1.32□□□□□ -2.2
VPS55YJR044C PET100P38958 111 aa1.32□□□□□ -2.2
VPS55YJR044C FET3P38993 636 aa1.32□□□□□ -2.2
VPS55YJR044C COX14P39103 70 aa1.32□□□□□ -2.2
VPS55YJR044C RCY1P39531 840 aa1.32□□□□□ -2.2
VPS55YJR044C BTT1P40314 149 aaPredicted RBP1.32□□□□□ -2.2
VPS55YJR044C ALG8P40351 577 aa1.32□□□□□ -2.2
VPS55YJR044C MAM33P40513 266 aa1.32□□□□□ -2.2
VPS55YJR044C YIA6P40556 373 aa1.32□□□□□ -2.2
VPS55YJR044C YNL320WP42840 284 aa1.32□□□□□ -2.2
VPS55YJR044C GCD14P46959 383 aaPredicted RBP1.32□□□□□ -2.2
VPS55YJR044C SFH5P47008 294 aa1.32□□□□□ -2.2
VPS55YJR044C AIM24P47127 394 aa1.32□□□□□ -2.2
VPS55YJR044C AZR1P50080 613 aa1.32□□□□□ -2.2
VPS55YJR044C YGL185CP53100 379 aa1.32□□□□□ -2.2
VPS55YJR044C YGR266WP53326 701 aa1.32□□□□□ -2.2
VPS55YJR044C RET3P53600 189 aa1.32□□□□□ -2.2
VPS55YJR044C MSO1P53604 210 aaKnown RBP1.32□□□□□ -2.2
VPS55YJR044C MRPL50P53724 139 aa1.32□□□□□ -2.2
VPS55YJR044C YNR048WP53740 393 aa1.32□□□□□ -2.2
VPS55YJR044C CAF40P53829 373 aa1.32□□□□□ -2.2
VPS55YJR044C HCH1P53834 153 aa1.32□□□□□ -2.2
VPS55YJR044C PET117Q02771 107 aa1.32□□□□□ -2.2
VPS55YJR044C PIR3Q03180 325 aa1.32□□□□□ -2.2
VPS55YJR044C NAT4Q04751 285 aa1.32□□□□□ -2.2
VPS55YJR044C YLR173WQ06247 608 aa1.32□□□□□ -2.2
VPS55YJR044C YLL007CQ07799 665 aa1.32□□□□□ -2.2
VPS55YJR044C RLP24Q07915 199 aaKnown RBP1.32□□□□□ -2.2
VPS55YJR044C SNX3Q08826 162 aaKnown RBP1.32□□□□□ -2.2
VPS55YJR044C TMS1Q12116 473 aa1.32□□□□□ -2.2
VPS55YJR044C TY3A-GQ12173 290 aa1.32□□□□□ -2.2
VPS55YJR044C SIA1Q12212 622 aa1.32□□□□□ -2.2
VPS55YJR044C RBD2Q12270 262 aa1.32□□□□□ -2.2
VPS55YJR044C TPT1Q12272 230 aaKnown RBP1.32□□□□□ -2.2
VPS55YJR044C LDB17Q12342 491 aa1.32□□□□□ -2.2
VPS55YJR044C ORT1Q12375 292 aa1.32□□□□□ -2.2
VPS55YJR044C HMS1Q12398 434 aa1.32□□□□□ -2.2
VPS55YJR044C TFC7Q12415 435 aa1.32□□□□□ -2.2
VPS55YJR044C FMP16Q12497 93 aa1.32□□□□□ -2.2
VPS55YJR044C TY3A-IQ99219 290 aa1.32□□□□□ -2.2
VPS55YJR044C MEX67Q99257 599 aaKnown RBP1.32□□□□□ -2.2
VPS55YJR044C CFT1Q06632 1357 aaKnown RBP1.32□□□□□ -2.2
VPS55YJR044C ILV1P00927 576 aaKnown RBP1.31□□□□□ -2.2
VPS55YJR044C PIS1P06197 220 aaKnown RBP1.31□□□□□ -2.2
VPS55YJR044C RPS16AP0CX51 143 aaKnown RBP1.31□□□□□ -2.2
VPS55YJR044C RPS16BP0CX52 143 aaKnown RBP1.31□□□□□ -2.2
VPS55YJR044C NAM2P11325 894 aa1.31□□□□□ -2.2
VPS55YJR044C MAS2P11914 482 aa1.31□□□□□ -2.2
VPS55YJR044C ATR1P13090 542 aa1.31□□□□□ -2.2
VPS55YJR044C CPR1P14832 162 aaKnown RBP1.31□□□□□ -2.2
VPS55YJR044C RPB4P20433 221 aaPredicted RBP1.31□□□□□ -2.2
VPS55YJR044C MEK1P24719 497 aaPredicted RBP1.31□□□□□ -2.2
VPS55YJR044C RVS161P25343 265 aaKnown RBP1.31□□□□□ -2.2
VPS55YJR044C PUT3P25502 979 aaPredicted RBP1.31□□□□□ -2.2
VPS55YJR044C MXR2P25566 168 aa1.31□□□□□ -2.2
VPS55YJR044C YCR016WP25617 290 aaKnown RBP1.31□□□□□ -2.2
VPS55YJR044C POP5P28005 173 aa1.31□□□□□ -2.2
VPS55YJR044C MEI5P32489 222 aa1.31□□□□□ -2.2
VPS55YJR044C GLC7P32598 312 aaKnown RBP1.31□□□□□ -2.2
VPS55YJR044C MUD1P32605 298 aaKnown RBP1.31□□□□□ -2.2
VPS55YJR044C YEF1P32622 495 aa1.31□□□□□ -2.2
VPS55YJR044C RAD5P32849 1169 aaPredicted RBP1.31□□□□□ -2.2
VPS55YJR044C BMH2P34730 273 aaKnown RBP1.31□□□□□ -2.2
VPS55YJR044C MCR1P36060 302 aaKnown RBP1.31□□□□□ -2.2
VPS55YJR044C SWD2P36104 329 aaPredicted RBP1.31□□□□□ -2.2
VPS55YJR044C NAT2P37293 288 aa1.31□□□□□ -2.2
VPS55YJR044C CHK1P38147 527 aa1.31□□□□□ -2.2
VPS55YJR044C IML3P38265 245 aa1.31□□□□□ -2.2
VPS55YJR044C HIS2P38635 335 aa1.31□□□□□ -2.2
VPS55YJR044C YHR045WP38775 560 aa1.31□□□□□ -2.2
VPS55YJR044C YPT35P38815 214 aaKnown RBP1.31□□□□□ -2.2
VPS55YJR044C CTM1P38818 585 aa1.31□□□□□ -2.2
VPS55YJR044C HAT2P39984 401 aa1.31□□□□□ -2.2
Retrieved 100 of 5,963 RNA–protein pairs in 27.9 ms