RNA–Protein interactions for RNA: YIL084C

SDS3, Transcript of Component of the Rpd3L histone deacetylase complex, yeastyeast

Gene SDS3, Length 984 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SDS3YIL084C ERP4Q12450 207 aa3.66□□□□□ -1.82
SDS3YIL084C YCL021W-AQ96VH3 125 aa3.66□□□□□ -1.82
SDS3YIL084C RNR2P09938 399 aaKnown RBP3.65□□□□□ -1.83
SDS3YIL084C RPL43AP0CX25 92 aaKnown RBP3.65□□□□□ -1.83
SDS3YIL084C RPL43BP0CX26 92 aa3.65□□□□□ -1.83
SDS3YIL084C HEM15P16622 393 aa3.65□□□□□ -1.83
SDS3YIL084C MDH1P17505 334 aaKnown RBP RIP-Chip data3.65□□□□□ -1.83not detected
SDS3YIL084C SPO7P18410 259 aa3.65□□□□□ -1.83
SDS3YIL084C DAL81P21657 970 aa3.65□□□□□ -1.83
SDS3YIL084C DAL2P25335 343 aa3.65□□□□□ -1.83
SDS3YIL084C CYM1P32898 989 aa3.65□□□□□ -1.83
SDS3YIL084C SOR1P35497 357 aaKnown RBP3.65□□□□□ -1.83
SDS3YIL084C MRPL40P36534 297 aa3.65□□□□□ -1.83
SDS3YIL084C SLM4P38247 162 aa3.65□□□□□ -1.83
SDS3YIL084C MST28P39552 234 aa3.65□□□□□ -1.83
SDS3YIL084C YEL075CP39972 122 aa3.65□□□□□ -1.83
SDS3YIL084C AIM23P47015 356 aa3.65□□□□□ -1.83
SDS3YIL084C YML6P51998 286 aa3.65□□□□□ -1.83
SDS3YIL084C YNR048WP53740 393 aa3.65□□□□□ -1.83
SDS3YIL084C PIR1Q03178 341 aa3.65□□□□□ -1.83
SDS3YIL084C ARO80Q04052 950 aa3.65□□□□□ -1.83
SDS3YIL084C RRN11Q04712 507 aa3.65□□□□□ -1.83
SDS3YIL084C YLR345WQ06137 509 aa3.65□□□□□ -1.83
SDS3YIL084C SOR2Q07786 357 aa3.65□□□□□ -1.83
SDS3YIL084C ATG10Q07879 167 aa3.65□□□□□ -1.83
SDS3YIL084C THP3Q12049 470 aaKnown RBP3.65□□□□□ -1.83
SDS3YIL084C YLL056CQ12177 298 aa3.65□□□□□ -1.83
SDS3YIL084C GIS3Q12418 502 aa3.65□□□□□ -1.83
SDS3YIL084C STT4P37297 1900 aa3.65□□□□□ -1.83
SDS3YIL084C CBS2P14905 389 aa3.64□□□□□ -1.83
SDS3YIL084C NOP1P15646 327 aaKnown RBP3.64□□□□□ -1.83
SDS3YIL084C LSB5P25369 354 aa3.64□□□□□ -1.83
SDS3YIL084C GEX1P25596 615 aa3.64□□□□□ -1.83
SDS3YIL084C RIB5P38145 238 aa3.64□□□□□ -1.83
SDS3YIL084C MIX23P38162 196 aa3.64□□□□□ -1.83
SDS3YIL084C RRN10P38204 145 aa3.64□□□□□ -1.83
SDS3YIL084C TCB2P48231 1178 aa3.64□□□□□ -1.83
SDS3YIL084C MND1P53102 219 aa3.64□□□□□ -1.83
SDS3YIL084C GOR1P53839 350 aa3.64□□□□□ -1.83
SDS3YIL084C VAC7P53950 1165 aa3.64□□□□□ -1.83
SDS3YIL084C CIK1Q01649 594 aa3.64□□□□□ -1.83
SDS3YIL084C YPL113CQ02961 396 aa3.64□□□□□ -1.83
SDS3YIL084C TAF12Q03761 539 aa3.64□□□□□ -1.83
SDS3YIL084C VHS1Q03785 461 aa3.64□□□□□ -1.83
SDS3YIL084C ESA1Q08649 445 aa3.64□□□□□ -1.83
SDS3YIL084C YLR046CQ12253 270 aa3.64□□□□□ -1.83
SDS3YIL084C YLR108CQ12259 485 aa3.64□□□□□ -1.83
SDS3YIL084C EMP46Q12396 444 aa3.64□□□□□ -1.83
SDS3YIL084C JIP3O13555 125 aa3.63□□□□□ -1.83
SDS3YIL084C IPP1P00817 287 aaKnown RBP3.63□□□□□ -1.83
SDS3YIL084C TEF1P02994 458 aaKnown RBP3.63□□□□□ -1.83
SDS3YIL084C RDS1P25611 832 aa3.63□□□□□ -1.83
SDS3YIL084C CTK3P46963 296 aaPredicted RBP3.63□□□□□ -1.83
SDS3YIL084C BOR1P53838 576 aa3.63□□□□□ -1.83
SDS3YIL084C GIP3Q03016 1276 aa3.63□□□□□ -1.83
SDS3YIL084C YMR181CQ03231 154 aa3.63□□□□□ -1.83
SDS3YIL084C RSN1Q03516 953 aa3.63□□□□□ -1.83
SDS3YIL084C BET5Q03630 159 aa3.63□□□□□ -1.83
SDS3YIL084C PPM1Q04081 328 aa3.63□□□□□ -1.83
SDS3YIL084C SCW10Q04951 389 aa3.63□□□□□ -1.83
SDS3YIL084C TAF9Q05027 157 aa3.63□□□□□ -1.83
SDS3YIL084C RLP24Q07915 199 aaKnown RBP3.63□□□□□ -1.83
SDS3YIL084C SKI7Q08491 747 aaPredicted RBP3.63□□□□□ -1.83
SDS3YIL084C RRP12Q12754 1228 aaKnown RBP3.63□□□□□ -1.83
SDS3YIL084C MTR10Q99189 972 aa3.63□□□□□ -1.83
SDS3YIL084C AI5_BETAQ9ZZX0 354 aa3.63□□□□□ -1.83
SDS3YIL084C HOM3P10869 527 aa3.62□□□□□ -1.83
SDS3YIL084C OM45P16547 393 aa3.62□□□□□ -1.83
SDS3YIL084C MET16P18408 261 aaPredicted RBP3.62□□□□□ -1.83
SDS3YIL084C PAN6P40459 309 aa3.62□□□□□ -1.83
SDS3YIL084C OST1P41543 476 aaKnown RBP3.62□□□□□ -1.83
SDS3YIL084C PHO86P46956 311 aa3.62□□□□□ -1.83
SDS3YIL084C YGR111WP53265 400 aa3.62□□□□□ -1.83
SDS3YIL084C OCA2P53949 197 aa3.62□□□□□ -1.83
SDS3YIL084C SUR7P54003 302 aa3.62□□□□□ -1.83
SDS3YIL084C VPS20Q04272 221 aa3.62□□□□□ -1.83
SDS3YIL084C AEP3Q12089 606 aa3.62□□□□□ -1.83
SDS3YIL084C YPL150WQ12152 901 aa3.62□□□□□ -1.83
SDS3YIL084C GLE1Q12315 538 aa3.62□□□□□ -1.83
SDS3YIL084C ORT1Q12375 292 aa3.62□□□□□ -1.83
SDS3YIL084C HHF1P02309 103 aaKnown RBP3.61□□□□□ -1.83
SDS3YIL084C POL30P15873 258 aaKnown RBP3.61□□□□□ -1.83
SDS3YIL084C CTR86P25355 563 aa3.61□□□□□ -1.83
SDS3YIL084C BMH1P29311 267 aaKnown RBP3.61□□□□□ -1.83
SDS3YIL084C NRP1P32770 719 aaKnown RBP RIP-Chip data3.61□□□□□ -1.83not detected
SDS3YIL084C SDH3P33421 198 aa3.61□□□□□ -1.83
SDS3YIL084C PAD1P33751 242 aaKnown RBP RIP-Chip data3.61□□□□□ -1.83not detected
SDS3YIL084C YBL059WP34224 193 aa3.61□□□□□ -1.83
SDS3YIL084C PRX1P34227 261 aaKnown RBP3.61□□□□□ -1.83
SDS3YIL084C PEX5P35056 612 aa3.61□□□□□ -1.83
SDS3YIL084C KKQ8P36004 724 aa3.61□□□□□ -1.83
SDS3YIL084C MTC6P38849 526 aa3.61□□□□□ -1.83
SDS3YIL084C YAL037WP39728 267 aa3.61□□□□□ -1.83
SDS3YIL084C WWM1P43582 211 aaKnown RBP3.61□□□□□ -1.83
SDS3YIL084C ASN2P49090 572 aaKnown RBP3.61□□□□□ -1.83
SDS3YIL084C YNL040WP53960 456 aaPredicted RBP3.61□□□□□ -1.83
SDS3YIL084C GPI15P53961 229 aa3.61□□□□□ -1.83
SDS3YIL084C KTR6P54070 446 aa3.61□□□□□ -1.83
SDS3YIL084C VPS9P54787 451 aa3.61□□□□□ -1.83
SDS3YIL084C ELP3Q02908 557 aaKnown RBP3.61□□□□□ -1.83
Retrieved 100 of 5,963 RNA–protein pairs in 42.7 ms