RNA–Protein interactions for RNA: YIL016W

SNL1, Transcript of Ribosome-associated protein, yeast

Gene SNL1, Length 480 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SNL1	YIL016W	PIS1	P06197	220 aa	Known RBP	3.94	□□□□□ -1.78
SNL1	YIL016W	MSS116	P15424	664 aa	Known RBP	3.94	□□□□□ -1.78
SNL1	YIL016W	CPR4	P25334	318 aa		3.94	□□□□□ -1.78
SNL1	YIL016W	RAD5	P32849	1169 aa	Predicted RBP	3.94	□□□□□ -1.78
SNL1	YIL016W	ECT1	P33412	323 aa		3.94	□□□□□ -1.78
SNL1	YIL016W	CDC40	P40968	455 aa	Predicted RBP	3.94	□□□□□ -1.78
SNL1	YIL016W	AIM24	P47127	394 aa		3.94	□□□□□ -1.78
SNL1	YIL016W	TRF5	P48561	642 aa	Known RBP	3.94	□□□□□ -1.78
SNL1	YIL016W	TAF6	P53040	516 aa		3.94	□□□□□ -1.78
SNL1	YIL016W	MTM1	P53320	366 aa		3.94	□□□□□ -1.78
SNL1	YIL016W	YGR266W	P53326	701 aa		3.94	□□□□□ -1.78
SNL1	YIL016W	PXR1	P53335	271 aa	Predicted RBP	3.94	□□□□□ -1.78
SNL1	YIL016W	LSC1	P53598	329 aa	Known RBP	3.94	□□□□□ -1.78
SNL1	YIL016W	MSO1	P53604	210 aa	Known RBP	3.94	□□□□□ -1.78
SNL1	YIL016W	YNL050C	P53952	270 aa		3.94	□□□□□ -1.78
SNL1	YIL016W	YMR102C	Q03177	834 aa		3.94	□□□□□ -1.78
SNL1	YIL016W	HNT3	Q08702	217 aa		3.94	□□□□□ -1.78
SNL1	YIL016W	YOR387C	Q08910	206 aa		3.94	□□□□□ -1.78
SNL1	YIL016W	FMP16	Q12497	93 aa		3.94	□□□□□ -1.78
SNL1	YIL016W	MEX67	Q99257	599 aa	Known RBP	3.94	□□□□□ -1.78
SNL1	YIL016W	UNG1	P12887	359 aa		3.93	□□□□□ -1.78
SNL1	YIL016W	YPT35	P38815	214 aa	Known RBP	3.93	□□□□□ -1.78
SNL1	YIL016W	PRM5	P40476	318 aa		3.93	□□□□□ -1.78
SNL1	YIL016W	YIL067C	P40514	678 aa		3.93	□□□□□ -1.78
SNL1	YIL016W	YCH1	P42937	148 aa		3.93	□□□□□ -1.78
SNL1	YIL016W	CTK3	P46963	296 aa	Predicted RBP	3.93	□□□□□ -1.78
SNL1	YIL016W	TDA1	Q03533	586 aa		3.93	□□□□□ -1.78
SNL1	YIL016W	CSM3	Q04659	317 aa		3.93	□□□□□ -1.78
SNL1	YIL016W	YLL007C	Q07799	665 aa		3.93	□□□□□ -1.78
SNL1	YIL016W	RAD7	P06779	565 aa		3.92	□□□□□ -1.78
SNL1	YIL016W	GPI12	P23797	304 aa		3.92	□□□□□ -1.78
SNL1	YIL016W	SPR1	P32603	445 aa		3.92	□□□□□ -1.78
SNL1	YIL016W	COT1	P32798	439 aa		3.92	□□□□□ -1.78
SNL1	YIL016W	MMS21	P38632	267 aa		3.92	□□□□□ -1.78
SNL1	YIL016W	IDP2	P41939	412 aa		3.92	□□□□□ -1.78
SNL1	YIL016W	YNL260C	P53846	198 aa		3.92	□□□□□ -1.78
SNL1	YIL016W	CRZ1	P53968	678 aa		3.92	□□□□□ -1.78
SNL1	YIL016W	ATC1	Q04005	294 aa		3.92	□□□□□ -1.78
SNL1	YIL016W	PRM6	Q04705	352 aa		3.92	□□□□□ -1.78
SNL1	YIL016W	GRS2	Q06817	618 aa		3.92	□□□□□ -1.78
SNL1	YIL016W	PBP4	Q07362	185 aa	Known RBP	3.92	□□□□□ -1.78
SNL1	YIL016W	LOT6	Q07923	191 aa		3.92	□□□□□ -1.78
SNL1	YIL016W	SMC5	Q08204	1093 aa		3.92	□□□□□ -1.78
SNL1	YIL016W	SLF1	Q12034	447 aa	Known RBP	3.92	□□□□□ -1.78
SNL1	YIL016W	LDB17	Q12342	491 aa		3.92	□□□□□ -1.78
SNL1	YIL016W	HTZ1	Q12692	134 aa	Known RBP	3.92	□□□□□ -1.78
SNL1	YIL016W	TMT1	P32643	299 aa		3.91	□□□□□ -1.78
SNL1	YIL016W	RPT5	P33297	434 aa	Known RBP	3.91	□□□□□ -1.78
SNL1	YIL016W	TPO5	P36029	618 aa		3.91	□□□□□ -1.78
SNL1	YIL016W	SMF2	P38778	549 aa		3.91	□□□□□ -1.78
SNL1	YIL016W	FHL1	P39521	936 aa		3.91	□□□□□ -1.78
SNL1	YIL016W	MAM33	P40513	266 aa		3.91	□□□□□ -1.78
SNL1	YIL016W	HAC1	P41546	238 aa		3.91	□□□□□ -1.78
SNL1	YIL016W	AGX1	P43567	385 aa		3.91	□□□□□ -1.78
SNL1	YIL016W	SHE10	P53075	577 aa		3.91	□□□□□ -1.78
SNL1	YIL016W	TIM11	P81449	96 aa	Predicted RBP	3.91	□□□□□ -1.78
SNL1	YIL016W	YPR091C	Q06833	770 aa		3.91	□□□□□ -1.78
SNL1	YIL016W	ESA1	Q08649	445 aa		3.91	□□□□□ -1.78
SNL1	YIL016W	YPQ1	Q12010	308 aa		3.91	□□□□□ -1.78
SNL1	YIL016W	TMS1	Q12116	473 aa		3.91	□□□□□ -1.78
SNL1	YIL016W	FCY22	Q12119	530 aa		3.91	□□□□□ -1.78
SNL1	YIL016W	YOL107W	Q12239	342 aa		3.91	□□□□□ -1.78
SNL1	YIL016W	YCL021W-A	Q96VH3	125 aa		3.91	□□□□□ -1.78
SNL1	YIL016W	TDH1	P00360	332 aa	Known RBP	3.9	□□□□□ -1.79
SNL1	YIL016W	ITR2	P30606	609 aa		3.9	□□□□□ -1.79
SNL1	YIL016W	AVT5	P38176	459 aa		3.9	□□□□□ -1.79
SNL1	YIL016W	NDT80	P38830	627 aa		3.9	□□□□□ -1.79
SNL1	YIL016W	SCC4	P40090	624 aa		3.9	□□□□□ -1.79
SNL1	YIL016W	INA22	P40576	216 aa		3.9	□□□□□ -1.79
SNL1	YIL016W	YGL242C	P53066	181 aa		3.9	□□□□□ -1.79
SNL1	YIL016W	CWC25	P53854	179 aa	Known RBP	3.9	□□□□□ -1.79
SNL1	YIL016W	MTQ1	P53944	314 aa		3.9	□□□□□ -1.79
SNL1	YIL016W	YML122C	Q03207	126 aa		3.9	□□□□□ -1.79
SNL1	YIL016W	RNH1	Q04740	348 aa		3.9	□□□□□ -1.79
SNL1	YIL016W	BCP1	Q06338	283 aa		3.9	□□□□□ -1.79
SNL1	YIL016W	TSR1	Q07381	788 aa	Known RBP	3.9	□□□□□ -1.79
SNL1	YIL016W	SIA1	Q12212	622 aa		3.9	□□□□□ -1.79
SNL1	YIL016W	PCL9	Q12477	304 aa		3.9	□□□□□ -1.79
SNL1	YIL016W	UBA3	Q99344	299 aa		3.9	□□□□□ -1.79
SNL1	YIL016W	NAM2	P11325	894 aa		3.89	□□□□□ -1.79
SNL1	YIL016W	RBK1	P25332	333 aa		3.89	□□□□□ -1.79
SNL1	YIL016W	DCC1	P25559	380 aa		3.89	□□□□□ -1.79
SNL1	YIL016W	RPL5	P26321	297 aa	Known RBP	3.89	□□□□□ -1.79
SNL1	YIL016W	ACB1	P31787	87 aa		3.89	□□□□□ -1.79
SNL1	YIL016W	SPO23	P33757	523 aa		3.89	□□□□□ -1.79
SNL1	YIL016W	DTR1	P38125	572 aa		3.89	□□□□□ -1.79
SNL1	YIL016W	CIN2	P46670	268 aa		3.89	□□□□□ -1.79
SNL1	YIL016W	NUP84	P52891	726 aa		3.89	□□□□□ -1.79
SNL1	YIL016W	SCS3	P53012	380 aa		3.89	□□□□□ -1.79
SNL1	YIL016W	YPL080C	Q02826	108 aa		3.89	□□□□□ -1.79
SNL1	YIL016W	YMR010W	Q03687	405 aa		3.89	□□□□□ -1.79
SNL1	YIL016W	YGK3	Q12222	375 aa	Predicted RBP	3.89	□□□□□ -1.79
SNL1	YIL016W	ICT1	Q12385	394 aa		3.89	□□□□□ -1.79
SNL1	YIL016W	YER078W-A	Q3E7A2	54 aa		3.89	□□□□□ -1.79
SNL1	YIL016W	RPS8A	P0CX39	200 aa	Known RBP	3.88	□□□□□ -1.79
SNL1	YIL016W	RPS8B	P0CX40	200 aa	Known RBP	3.88	□□□□□ -1.79
SNL1	YIL016W	RPL16A	P26784	199 aa	Known RBP	3.88	□□□□□ -1.79
SNL1	YIL016W	POP5	P28005	173 aa		3.88	□□□□□ -1.79
SNL1	YIL016W	ERG9	P29704	444 aa		3.88	□□□□□ -1.79
SNL1	YIL016W	IME2	P32581	645 aa		3.88	□□□□□ -1.79

Retrieved 100 of 5,963 RNA–protein pairs in 18.3 ms