RNA–Protein interactions for RNA: YHR041C

SRB2, Transcript of Subunit of the RNA polymerase II mediator complex, yeast

Gene SRB2, Length 633 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SRB2	YHR041C	FLP1	P03870	423 aa		12.01	□□□□□ -0.49
SRB2	YHR041C	CAR2	P07991	424 aa	Known RBP	12.01	□□□□□ -0.49
SRB2	YHR041C	NCP1	P16603	691 aa	Known RBP	12.01	□□□□□ -0.49
SRB2	YHR041C	SNU114	P36048	1008 aa	Known RBP	12.01	□□□□□ -0.49
SRB2	YHR041C	RTC2	P38279	296 aa		12.01	□□□□□ -0.49
SRB2	YHR041C	IFA38	P38286	347 aa		12.01	□□□□□ -0.49
SRB2	YHR041C	LEM3	P42838	414 aa		12.01	□□□□□ -0.49
SRB2	YHR041C	RSM10	Q03201	203 aa		12.01	□□□□□ -0.49
SRB2	YHR041C	NUP53	Q03790	475 aa		12.01	□□□□□ -0.49
SRB2	YHR041C	YPS7	Q06325	596 aa		12.01	□□□□□ -0.49
SRB2	YHR041C	FMP40	Q08968	688 aa	Predicted RBP	12.01	□□□□□ -0.49
SRB2	YHR041C	REX3	Q12090	404 aa		12.01	□□□□□ -0.49
SRB2	YHR041C	PAR32	Q12515	295 aa	Known RBP	12.01	□□□□□ -0.49
SRB2	YHR041C	DFG16	Q99234	619 aa		12.01	□□□□□ -0.49
SRB2	YHR041C	CUP1-1	P0CX80	61 aa		12	□□□□□ -0.49
SRB2	YHR041C	CUP1-2	P0CX81	61 aa		12	□□□□□ -0.49
SRB2	YHR041C	ERD2	P18414	219 aa		12	□□□□□ -0.49
SRB2	YHR041C	MPH1	P40562	993 aa		12	□□□□□ -0.49
SRB2	YHR041C	GIS1	Q03833	894 aa		12	□□□□□ -0.49
SRB2	YHR041C	CYK3	Q07533	885 aa		12	□□□□□ -0.49
SRB2	YHR041C	MSL5	Q12186	476 aa	Known RBP RIP-Chip data	12	□□□□□ -0.49	not detected
SRB2	YHR041C	YOL162W	P0CF19	215 aa		11.99	□□□□□ -0.49
SRB2	YHR041C	PBN1	P25580	416 aa		11.99	□□□□□ -0.49
SRB2	YHR041C	BCK2	P33306	851 aa		11.99	□□□□□ -0.49
SRB2	YHR041C	TIF3	P34167	436 aa	Known RBP	11.99	□□□□□ -0.49
SRB2	YHR041C	GVP36	P40531	326 aa	Known RBP	11.99	□□□□□ -0.49
SRB2	YHR041C	SHR5	P41912	237 aa		11.99	□□□□□ -0.49
SRB2	YHR041C	VNX1	P42839	908 aa		11.99	□□□□□ -0.49
SRB2	YHR041C	RBG2	P53295	368 aa	Known RBP	11.99	□□□□□ -0.49
SRB2	YHR041C	GCN1	P33892	2672 aa	Known RBP	11.98	□□□□□ -0.49
SRB2	YHR041C	CTA1	P15202	515 aa		11.98	□□□□□ -0.49
SRB2	YHR041C	EXO84	P38261	753 aa		11.98	□□□□□ -0.49
SRB2	YHR041C	PEX18	P38855	283 aa		11.98	□□□□□ -0.49
SRB2	YHR041C	SER3	P40054	469 aa		11.98	□□□□□ -0.49
SRB2	YHR041C	GCN20	P43535	752 aa	Known RBP	11.98	□□□□□ -0.49
SRB2	YHR041C	VMA10	P48836	114 aa	Known RBP	11.98	□□□□□ -0.49
SRB2	YHR041C	YKR011C	Q02209	353 aa		11.98	□□□□□ -0.49
SRB2	YHR041C	RRG7	Q08774	242 aa	Predicted RBP	11.98	□□□□□ -0.49
SRB2	YHR041C	SPC3	Q12133	184 aa		11.98	□□□□□ -0.49
SRB2	YHR041C	RRP7	P25368	297 aa	Predicted RBP	11.97	□□□□□ -0.49
SRB2	YHR041C	PRP19	P32523	503 aa	Known RBP	11.97	□□□□□ -0.49
SRB2	YHR041C	DHR2	P36009	735 aa	Predicted RBP	11.97	□□□□□ -0.49
SRB2	YHR041C	ALG3	P38179	458 aa		11.97	□□□□□ -0.49
SRB2	YHR041C	PDS1	P40316	373 aa	Predicted RBP	11.97	□□□□□ -0.49
SRB2	YHR041C	SOK1	P40317	901 aa		11.97	□□□□□ -0.49
SRB2	YHR041C	PHB1	P40961	287 aa		11.97	□□□□□ -0.49
SRB2	YHR041C	RPE1	P46969	238 aa		11.97	□□□□□ -0.49
SRB2	YHR041C	BAT2	P47176	376 aa	Known RBP	11.97	□□□□□ -0.49
SRB2	YHR041C	YDR209C	Q03480	137 aa		11.97	□□□□□ -0.49
SRB2	YHR041C	EKI1	Q03764	534 aa		11.97	□□□□□ -0.49
SRB2	YHR041C	HDA2	Q06629	674 aa		11.97	□□□□□ -0.49
SRB2	YHR041C	MDM32	Q12171	622 aa		11.97	□□□□□ -0.49
SRB2	YHR041C	TIM12	P32830	109 aa		11.96	□□□□□ -0.49
SRB2	YHR041C	MDL1	P33310	695 aa		11.96	□□□□□ -0.49
SRB2	YHR041C	MRPL16	P38064	232 aa		11.96	□□□□□ -0.49
SRB2	YHR041C	SIC1	P38634	284 aa		11.96	□□□□□ -0.49
SRB2	YHR041C	RPP1	P38786	293 aa		11.96	□□□□□ -0.49
SRB2	YHR041C	SBE22	P38814	852 aa		11.96	□□□□□ -0.49
SRB2	YHR041C	RRG9	P40156	214 aa		11.96	□□□□□ -0.49
SRB2	YHR041C	LSG1	P53145	640 aa	Known RBP	11.96	□□□□□ -0.49
SRB2	YHR041C	ASI1	P54074	624 aa		11.96	□□□□□ -0.49
SRB2	YHR041C	YLR345W	Q06137	509 aa		11.96	□□□□□ -0.49
SRB2	YHR041C	YOR214C	Q12282	236 aa		11.96	□□□□□ -0.49
SRB2	YHR041C	DET1	Q99288	334 aa	Known RBP	11.96	□□□□□ -0.49
SRB2	YHR041C	TPK3	P05986	398 aa		11.95	□□□□□ -0.5
SRB2	YHR041C	ERD1	P16151	362 aa		11.95	□□□□□ -0.5
SRB2	YHR041C	YPK2	P18961	677 aa		11.95	□□□□□ -0.5
SRB2	YHR041C	ECM15	P35195	104 aa		11.95	□□□□□ -0.5
SRB2	YHR041C	MTC4	P38335	694 aa	Known RBP	11.95	□□□□□ -0.5
SRB2	YHR041C	GRE3	P38715	327 aa	Known RBP RIP-Chip data	11.95	□□□□□ -0.5	not detected
SRB2	YHR041C	EGD2	P38879	174 aa	Known RBP	11.95	□□□□□ -0.5
SRB2	YHR041C	HRB1	P38922	454 aa	Known RBP RIP-Chip data	11.95	□□□□□ -0.5	not detected
SRB2	YHR041C	YGR168C	P53293	376 aa		11.95	□□□□□ -0.5
SRB2	YHR041C	URC2	Q04411	772 aa		11.95	□□□□□ -0.5
SRB2	YHR041C	AVO1	Q08236	1176 aa		11.95	□□□□□ -0.5
SRB2	YHR041C	YRA1	Q12159	226 aa	Known RBP	11.95	□□□□□ -0.5
SRB2	YHR041C	SAM35	P14693	329 aa		11.94	□□□□□ -0.5
SRB2	YHR041C	SKN7	P38889	622 aa		11.94	□□□□□ -0.5
SRB2	YHR041C	SOP4	P39543	234 aa	Predicted RBP	11.94	□□□□□ -0.5
SRB2	YHR041C	EMC2	P47133	292 aa	Known RBP	11.94	□□□□□ -0.5
SRB2	YHR041C	COS1	P53822	381 aa		11.94	□□□□□ -0.5
SRB2	YHR041C	ATG4	P53867	494 aa		11.94	□□□□□ -0.5
SRB2	YHR041C	CUZ1	P53899	274 aa		11.94	□□□□□ -0.5
SRB2	YHR041C	CGI121	Q03705	181 aa	Known RBP	11.94	□□□□□ -0.5
SRB2	YHR041C	ELP6	Q04868	273 aa		11.94	□□□□□ -0.5
SRB2	YHR041C	BTS1	Q12051	335 aa		11.94	□□□□□ -0.5
SRB2	YHR041C	PST2	Q12335	198 aa	Known RBP	11.94	□□□□□ -0.5
SRB2	YHR041C	MHF1	Q3E835	90 aa		11.94	□□□□□ -0.5
SRB2	YHR041C	FAR1	P21268	830 aa		11.93	□□□□□ -0.5
SRB2	YHR041C	YBR138C	P38277	524 aa		11.93	□□□□□ -0.5
SRB2	YHR041C	TDA11	P38854	504 aa		11.93	□□□□□ -0.5
SRB2	YHR041C	IRC6	P43615	237 aa		11.93	□□□□□ -0.5
SRB2	YHR041C	PGU1	P47180	361 aa		11.93	□□□□□ -0.5
SRB2	YHR041C	YNR062C	P53748	327 aa		11.93	□□□□□ -0.5
SRB2	YHR041C	RHO5	P53879	331 aa	Known RBP	11.93	□□□□□ -0.5
SRB2	YHR041C	ABZ2	Q03266	374 aa		11.93	□□□□□ -0.5
SRB2	YHR041C	SNX41	Q04053	625 aa		11.93	□□□□□ -0.5
SRB2	YHR041C	BUD5	P25300	642 aa	Predicted RBP	11.92	□□□□□ -0.5
SRB2	YHR041C	AVT6	P40074	448 aa		11.92	□□□□□ -0.5
SRB2	YHR041C	YIL067C	P40514	678 aa		11.92	□□□□□ -0.5

Retrieved 100 of 5,963 RNA–protein pairs in 24.7 ms