RNA–Protein interactions for RNA: YHL022C

SPO11, Transcript of Meiosis-specific protein that initiates meiotic recombination, yeast

Gene SPO11, Length 1,197 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SPO11	YHL022C	SPE3	Q12074	293 aa	Known RBP	2.62	□□□□□ -1.99
SPO11	YHL022C	YDL109C	Q12103	647 aa		2.62	□□□□□ -1.99
SPO11	YHL022C	SMC6	Q12749	1114 aa		2.62	□□□□□ -1.99
SPO11	YHL022C	EPT1	P22140	391 aa		2.61	□□□□□ -1.99
SPO11	YHL022C	RPL16A	P26784	199 aa	Known RBP	2.61	□□□□□ -1.99
SPO11	YHL022C	RRT13	P40042	185 aa		2.61	□□□□□ -1.99
SPO11	YHL022C	BUD27	P43573	796 aa	Known RBP RIP-Chip data	2.61	□□□□□ -1.99	not detected
SPO11	YHL022C	CDH1	P53197	566 aa		2.61	□□□□□ -1.99
SPO11	YHL022C	RNH201	P53942	307 aa		2.61	□□□□□ -1.99
SPO11	YHL022C	MRX11	Q03079	207 aa		2.61	□□□□□ -1.99
SPO11	YHL022C	RPN5	Q12250	445 aa	Known RBP	2.61	□□□□□ -1.99
SPO11	YHL022C	RPL23A	P0CX41	137 aa	Known RBP	2.6	□□□□□ -1.99
SPO11	YHL022C	RPL23B	P0CX42	137 aa	Known RBP	2.6	□□□□□ -1.99
SPO11	YHL022C	RPL1A	P0CX43	217 aa	Known RBP	2.6	□□□□□ -1.99
SPO11	YHL022C	RPL1B	P0CX44	217 aa	Known RBP	2.6	□□□□□ -1.99
SPO11	YHL022C	RRP7	P25368	297 aa	Predicted RBP	2.6	□□□□□ -1.99
SPO11	YHL022C	IME2	P32581	645 aa		2.6	□□□□□ -1.99
SPO11	YHL022C	KAP104	P38217	918 aa	Known RBP	2.6	□□□□□ -1.99
SPO11	YHL022C	SHE3	P38272	425 aa	Known RBP	2.6	□□□□□ -1.99
SPO11	YHL022C	YJR054W	P47114	497 aa		2.6	□□□□□ -1.99
SPO11	YHL022C	YGR015C	P53208	328 aa		2.6	□□□□□ -1.99
SPO11	YHL022C	RPS14A	P06367	137 aa	Known RBP	2.59	□□□□□ -1.99
SPO11	YHL022C	PMT2	P31382	759 aa		2.59	□□□□□ -1.99
SPO11	YHL022C	SHE1	P38200	338 aa		2.59	□□□□□ -1.99
SPO11	YHL022C	SRP72	P38688	640 aa	Known RBP	2.59	□□□□□ -1.99
SPO11	YHL022C	RPS14B	P39516	138 aa	Known RBP	2.59	□□□□□ -1.99
SPO11	YHL022C	EFM4	P40516	257 aa		2.59	□□□□□ -1.99
SPO11	YHL022C	CIK1	Q01649	594 aa		2.59	□□□□□ -1.99
SPO11	YHL022C	YLH47	Q06493	454 aa		2.59	□□□□□ -1.99
SPO11	YHL022C	IPK1	Q06667	281 aa		2.59	□□□□□ -1.99
SPO11	YHL022C	DDC1	Q08949	612 aa		2.59	□□□□□ -1.99
SPO11	YHL022C	MRPL8	P22353	238 aa		2.58	□□□□□ -2
SPO11	YHL022C	AGA2	P32781	87 aa		2.58	□□□□□ -2
SPO11	YHL022C	COS9	P36034	407 aa		2.58	□□□□□ -2
SPO11	YHL022C	MLH1	P38920	769 aa		2.58	□□□□□ -2
SPO11	YHL022C	STB1	P42845	420 aa		2.58	□□□□□ -2
SPO11	YHL022C	HST4	P53688	370 aa		2.58	□□□□□ -2
SPO11	YHL022C	AUS1	Q08409	1394 aa		2.58	□□□□□ -2
SPO11	YHL022C	DBP7	P36120	742 aa	Known RBP	2.57	□□□□□ -2
SPO11	YHL022C	LCB2	P40970	561 aa		2.57	□□□□□ -2
SPO11	YHL022C	CPR7	P47103	393 aa		2.57	□□□□□ -2
SPO11	YHL022C	YAL067W-A	Q8TGK6	75 aa		2.57	□□□□□ -2
SPO11	YHL022C	MIR1	P23641	311 aa	Known RBP	2.56	□□□□□ -2
SPO11	YHL022C	ZIP1	P31111	875 aa		2.56	□□□□□ -2
SPO11	YHL022C	SPS19	P32573	292 aa	Known RBP	2.56	□□□□□ -2
SPO11	YHL022C	VMA8	P32610	256 aa	Known RBP	2.56	□□□□□ -2
SPO11	YHL022C	YIR035C	P40579	254 aa		2.56	□□□□□ -2
SPO11	YHL022C	AIM23	P47015	356 aa		2.56	□□□□□ -2
SPO11	YHL022C	SLT2	Q00772	484 aa		2.56	□□□□□ -2
SPO11	YHL022C	GAS2	Q06135	555 aa		2.56	□□□□□ -2
SPO11	YHL022C	APC2	Q12440	853 aa		2.56	□□□□□ -2
SPO11	YHL022C	YOR338W	Q99326	363 aa		2.56	□□□□□ -2
SPO11	YHL022C	SHS1	Q07657	551 aa		2.55	□□□□□ -2
SPO11	YHL022C	SRN2	Q99176	213 aa		2.55	□□□□□ -2
SPO11	YHL022C	DET1	Q99288	334 aa	Known RBP	2.55	□□□□□ -2
SPO11	YHL022C	FLO11	P08640	1367 aa		2.54	□□□□□ -2
SPO11	YHL022C	FUS3	P16892	353 aa	Known RBP	2.54	□□□□□ -2
SPO11	YHL022C	SSE1	P32589	693 aa	Known RBP	2.54	□□□□□ -2
SPO11	YHL022C	DIA1	P54005	336 aa		2.54	□□□□□ -2
SPO11	YHL022C	MRX8	Q05473	314 aa		2.54	□□□□□ -2
SPO11	YHL022C	AST1	P35183	429 aa		2.53	□□□□□ -2
SPO11	YHL022C	YKR015C	P36111	568 aa		2.53	□□□□□ -2
SPO11	YHL022C	FRM2	P37261	193 aa		2.53	□□□□□ -2
SPO11	YHL022C	TRR2	P38816	342 aa		2.53	□□□□□ -2
SPO11	YHL022C	SPO73	P40031	143 aa		2.53	□□□□□ -2
SPO11	YHL022C	YML6	P51998	286 aa		2.53	□□□□□ -2
SPO11	YHL022C	SED5	Q01590	340 aa		2.53	□□□□□ -2
SPO11	YHL022C	API2	Q04413	109 aa		2.53	□□□□□ -2
SPO11	YHL022C	YOL029C	Q08187	201 aa		2.53	□□□□□ -2
SPO11	YHL022C	SLM3	Q12093	417 aa		2.53	□□□□□ -2
SPO11	YHL022C	MPE1	P35728	441 aa	Known RBP	2.52	□□□□□ -2.01
SPO11	YHL022C	RCK2	P38623	610 aa		2.52	□□□□□ -2.01
SPO11	YHL022C	ZRG17	P53735	605 aa		2.52	□□□□□ -2.01
SPO11	YHL022C	CKA2	P19454	339 aa		2.51	□□□□□ -2.01
SPO11	YHL022C	RAD23	P32628	398 aa	Known RBP	2.51	□□□□□ -2.01
SPO11	YHL022C	YJR030C	P47101	745 aa		2.51	□□□□□ -2.01
SPO11	YHL022C	RPN14	P53196	417 aa		2.51	□□□□□ -2.01
SPO11	YHL022C	YPR078C	Q06813	372 aa		2.51	□□□□□ -2.01
SPO11	YHL022C	STE2	D6VTK4	431 aa		2.5	□□□□□ -2.01
SPO11	YHL022C	GGC1	P38988	300 aa		2.5	□□□□□ -2.01
SPO11	YHL022C	LYS12	P40495	371 aa	Known RBP	2.5	□□□□□ -2.01
SPO11	YHL022C	YJL055W	P47044	245 aa		2.5	□□□□□ -2.01
SPO11	YHL022C	EFM3	P47163	339 aa		2.5	□□□□□ -2.01
SPO11	YHL022C	SCS7	Q03529	384 aa		2.5	□□□□□ -2.01
SPO11	YHL022C	INP2	Q03824	705 aa		2.5	□□□□□ -2.01
SPO11	YHL022C	FRE8	Q12209	686 aa		2.5	□□□□□ -2.01
SPO11	YHL022C	PAR32	Q12515	295 aa	Known RBP	2.5	□□□□□ -2.01
SPO11	YHL022C	DBR1	P24309	405 aa	Known RBP	2.49	□□□□□ -2.01
SPO11	YHL022C	MNE1	P24720	663 aa		2.49	□□□□□ -2.01
SPO11	YHL022C	SKG6	P32900	734 aa	Predicted RBP	2.49	□□□□□ -2.01
SPO11	YHL022C	VAM7	P32912	316 aa		2.49	□□□□□ -2.01
SPO11	YHL022C	PXA2	P34230	853 aa		2.49	□□□□□ -2.01
SPO11	YHL022C	PTK1	P36002	662 aa	Predicted RBP	2.49	□□□□□ -2.01
SPO11	YHL022C	YHR182W	P38870	785 aa		2.49	□□□□□ -2.01
SPO11	YHL022C	UFE1	P41834	346 aa		2.49	□□□□□ -2.01
SPO11	YHL022C	RET3	P53600	189 aa		2.49	□□□□□ -2.01
SPO11	YHL022C	VPS9	P54787	451 aa		2.49	□□□□□ -2.01
SPO11	YHL022C	TRM82	Q03774	444 aa		2.49	□□□□□ -2.01
SPO11	YHL022C	VTI1	Q04338	217 aa		2.49	□□□□□ -2.01
SPO11	YHL022C	COX10	P21592	462 aa		2.48	□□□□□ -2.01

Retrieved 100 of 5,963 RNA–protein pairs in 19.2 ms