RNA–Protein interactions for RNA: YGR116W

SPT6, Transcript of Nucleosome remodeling protein, yeastyeast

Gene SPT6, Length 4,356 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPT6YGR116W YOR352WQ08816 343 aa3.49□□□□□ -1.85
SPT6YGR116W BTS1Q12051 335 aa3.49□□□□□ -1.85
SPT6YGR116W ISN1Q99312 450 aa3.49□□□□□ -1.85
SPT6YGR116W FSH3Q99369 266 aa3.49□□□□□ -1.85
SPT6YGR116W SEC12P11655 471 aa3.48□□□□□ -1.85
SPT6YGR116W YCR061WP25639 631 aa3.48□□□□□ -1.85
SPT6YGR116W LIP5P32875 414 aa3.48□□□□□ -1.85
SPT6YGR116W SRP102P36057 244 aaPredicted RBP3.48□□□□□ -1.85
SPT6YGR116W DED81P38707 554 aaKnown RBP3.48□□□□□ -1.85
SPT6YGR116W LNP1P38878 278 aa3.48□□□□□ -1.85
SPT6YGR116W CHL4P38907 458 aa3.48□□□□□ -1.85
SPT6YGR116W MRX5P47007 382 aa3.48□□□□□ -1.85
SPT6YGR116W YPR091CQ06833 770 aa3.48□□□□□ -1.85
SPT6YGR116W LUC7Q07508 261 aaPredicted RBP3.48□□□□□ -1.85
SPT6YGR116W RKM5Q12367 367 aa3.48□□□□□ -1.85
SPT6YGR116W DGK1Q12382 290 aa3.48□□□□□ -1.85
SPT6YGR116W AAC3P18238 307 aa3.48□□□□□ -1.85
SPT6YGR116W SNF6P18888 332 aa3.48□□□□□ -1.85
SPT6YGR116W PRE7P23724 241 aaKnown RBP3.48□□□□□ -1.85
SPT6YGR116W MRP17P28778 131 aa3.48□□□□□ -1.85
SPT6YGR116W ATP11P32453 318 aa3.48□□□□□ -1.85
SPT6YGR116W LYP1P32487 611 aa3.48□□□□□ -1.85
SPT6YGR116W PTR2P32901 601 aa3.48□□□□□ -1.85
SPT6YGR116W RPF2P36160 344 aaKnown RBP3.48□□□□□ -1.85
SPT6YGR116W SHE1P38200 338 aa3.48□□□□□ -1.85
SPT6YGR116W PEX32P38292 413 aa3.48□□□□□ -1.85
SPT6YGR116W ERV15P38312 142 aa3.48□□□□□ -1.85
SPT6YGR116W LAS21P40367 830 aa3.48□□□□□ -1.85
SPT6YGR116W FOL2P51601 243 aaKnown RBP3.48□□□□□ -1.85
SPT6YGR116W YNL134CP53912 376 aaKnown RBP3.48□□□□□ -1.85
SPT6YGR116W REC102Q02721 264 aa3.48□□□□□ -1.85
SPT6YGR116W PLB2Q03674 706 aa3.48□□□□□ -1.85
SPT6YGR116W ANT1Q06497 328 aa3.48□□□□□ -1.85
SPT6YGR116W PER33Q12144 273 aa3.48□□□□□ -1.85
SPT6YGR116W RRP42Q12277 265 aaPredicted RBP3.48□□□□□ -1.85
SPT6YGR116W CSR2Q12734 1121 aa3.48□□□□□ -1.85
SPT6YGR116W RAS1P01119 309 aa3.48□□□□□ -1.85
SPT6YGR116W GAL80P04387 435 aa3.48□□□□□ -1.85
SPT6YGR116W CBP6P07253 162 aaPredicted RBP3.48□□□□□ -1.85
SPT6YGR116W RPC40P07703 335 aaKnown RBP3.48□□□□□ -1.85
SPT6YGR116W RPS18AP0CX55 146 aaKnown RBP3.48□□□□□ -1.85
SPT6YGR116W RPS18BP0CX56 146 aaPredicted RBP3.48□□□□□ -1.85
SPT6YGR116W EXG1P23776 448 aaKnown RBP3.48□□□□□ -1.85
SPT6YGR116W DBP1P24784 617 aaKnown RBP3.48□□□□□ -1.85
SPT6YGR116W PUB1P32588 453 aaKnown RBP RIP-Chip data3.48□□□□□ -1.85not detected
SPT6YGR116W TIP20P33891 701 aa3.48□□□□□ -1.85
SPT6YGR116W SHG1P38337 142 aa3.48□□□□□ -1.85
SPT6YGR116W AIM24P47127 394 aa3.48□□□□□ -1.85
SPT6YGR116W INN1P53901 409 aa3.48□□□□□ -1.85
SPT6YGR116W AAT1Q01802 451 aa3.48□□□□□ -1.85
SPT6YGR116W PNG1Q02890 363 aa3.48□□□□□ -1.85
SPT6YGR116W YPD1Q07688 167 aa3.48□□□□□ -1.85
SPT6YGR116W YLR036CQ07986 203 aa3.48□□□□□ -1.85
SPT6YGR116W AVO1Q08236 1176 aa3.48□□□□□ -1.85
SPT6YGR116W RRP40Q08285 240 aaKnown RBP3.48□□□□□ -1.85
SPT6YGR116W TGL5Q12043 749 aa3.48□□□□□ -1.85
SPT6YGR116W VMA9Q3E7B6 73 aa3.48□□□□□ -1.85
SPT6YGR116W MIH1P23748 554 aa3.47□□□□□ -1.85
SPT6YGR116W MSS51P32335 436 aa3.47□□□□□ -1.85
SPT6YGR116W CDC12P32468 407 aaKnown RBP3.47□□□□□ -1.85
SPT6YGR116W COS9P36034 407 aa3.47□□□□□ -1.85
SPT6YGR116W MIA40P36046 403 aa3.47□□□□□ -1.85
SPT6YGR116W YKL077WP36081 392 aa3.47□□□□□ -1.85
SPT6YGR116W ARO9P38840 513 aaPredicted RBP3.47□□□□□ -1.85
SPT6YGR116W GCV3P39726 170 aaPredicted RBP3.47□□□□□ -1.85
SPT6YGR116W SNG1P46950 547 aa3.47□□□□□ -1.85
SPT6YGR116W SIP4P46954 829 aa3.47□□□□□ -1.85
SPT6YGR116W PHO23P50947 330 aa3.47□□□□□ -1.85
SPT6YGR116W SDT1P53078 280 aa3.47□□□□□ -1.85
SPT6YGR116W YNL143CP53908 130 aa3.47□□□□□ -1.85
SPT6YGR116W PUF2Q12221 1075 aaKnown RBP RIP-Chip data3.47□□□□□ -1.85not detected
SPT6YGR116W RRI1Q12468 440 aa3.47□□□□□ -1.85
SPT6YGR116W SKS1Q12505 502 aa3.47□□□□□ -1.85
SPT6YGR116W SCH9P11792 824 aaKnown RBP3.47□□□□□ -1.85
SPT6YGR116W PDA1P16387 420 aaKnown RBP3.47□□□□□ -1.85
SPT6YGR116W PRP2P20095 876 aaPredicted RBP3.47□□□□□ -1.85
SPT6YGR116W FUN26P31381 517 aa3.47□□□□□ -1.85
SPT6YGR116W GSH1P32477 678 aa3.47□□□□□ -1.85
SPT6YGR116W RMA1P36001 430 aaKnown RBP3.47□□□□□ -1.85
SPT6YGR116W YKL162CP36052 402 aa3.47□□□□□ -1.85
SPT6YGR116W GPT2P36148 743 aa3.47□□□□□ -1.85
SPT6YGR116W HTD2P38790 280 aaKnown RBP3.47□□□□□ -1.85
SPT6YGR116W PNT1P38969 423 aa3.47□□□□□ -1.85
SPT6YGR116W YIL024CP40543 189 aa3.47□□□□□ -1.85
SPT6YGR116W MRPS18P42847 217 aa3.47□□□□□ -1.85
SPT6YGR116W PAC10P48363 199 aa3.47□□□□□ -1.85
SPT6YGR116W TFB5Q3E7C1 72 aaPredicted RBP3.47□□□□□ -1.85
SPT6YGR116W CDC34P14682 295 aa3.47□□□□□ -1.85
SPT6YGR116W GLK1P17709 500 aaKnown RBP3.47□□□□□ -1.85
SPT6YGR116W FUR1P18562 216 aaKnown RBP3.47□□□□□ -1.85
SPT6YGR116W DAL81P21657 970 aa3.47□□□□□ -1.85
SPT6YGR116W RBK1P25332 333 aa3.47□□□□□ -1.85
SPT6YGR116W GLC3P32775 704 aa3.47□□□□□ -1.85
SPT6YGR116W CDC13P32797 924 aaKnown RBP3.47□□□□□ -1.85
SPT6YGR116W MSN2P33748 704 aa3.47□□□□□ -1.85
SPT6YGR116W YJR124CP47159 448 aa3.47□□□□□ -1.85
SPT6YGR116W YGL159WP53110 370 aa3.47□□□□□ -1.85
SPT6YGR116W SYF2P53277 215 aaPredicted RBP3.47□□□□□ -1.85
SPT6YGR116W BSC5P53755 489 aa3.47□□□□□ -1.85
SPT6YGR116W MEH1Q02205 184 aa3.47□□□□□ -1.85
Retrieved 100 of 5,963 RNA–protein pairs in 32.8 ms