RNA–Protein interactions for RNA: YFL002C

SPB4, Transcript of Putative ATP-dependent RNA helicase, yeastyeast

Gene SPB4, Length 1,821 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPB4YFL002C YHR182WP38870 785 aa3.65□□□□□ -1.83
SPB4YFL002C TIM21P53220 239 aa3.65□□□□□ -1.83
SPB4YFL002C MKC7P53379 596 aa3.65□□□□□ -1.83
SPB4YFL002C PET117Q02771 107 aa3.65□□□□□ -1.83
SPB4YFL002C BTS1Q12051 335 aa3.65□□□□□ -1.83
SPB4YFL002C POL30P15873 258 aaKnown RBP3.64□□□□□ -1.83
SPB4YFL002C ERG9P29704 444 aa3.64□□□□□ -1.83
SPB4YFL002C NDC1P32500 655 aa3.64□□□□□ -1.83
SPB4YFL002C TRS65P32893 560 aa3.64□□□□□ -1.83
SPB4YFL002C TCD1P38756 429 aa3.64□□□□□ -1.83
SPB4YFL002C JLP2P40206 208 aa3.64□□□□□ -1.83
SPB4YFL002C FMC1P40491 155 aa3.64□□□□□ -1.83
SPB4YFL002C YIR016WP40572 265 aa3.64□□□□□ -1.83
SPB4YFL002C YAR1P46683 200 aa3.64□□□□□ -1.83
SPB4YFL002C MRX5P47007 382 aa3.64□□□□□ -1.83
SPB4YFL002C KAP114P53067 1004 aa3.64□□□□□ -1.83
SPB4YFL002C OKP1P53298 406 aa3.64□□□□□ -1.83
SPB4YFL002C CAF40P53829 373 aa3.64□□□□□ -1.83
SPB4YFL002C HCR1Q05775 265 aaKnown RBP3.64□□□□□ -1.83
SPB4YFL002C SNX3Q08826 162 aaKnown RBP3.64□□□□□ -1.83
SPB4YFL002C ADF1Q2V2Q1 113 aa3.64□□□□□ -1.83
SPB4YFL002C SAC3P46674 1301 aa3.64□□□□□ -1.83
SPB4YFL002C MTF1P14908 341 aaKnown RBP3.63□□□□□ -1.83
SPB4YFL002C RBK1P25332 333 aa3.63□□□□□ -1.83
SPB4YFL002C ARO4P32449 370 aaKnown RBP3.63□□□□□ -1.83
SPB4YFL002C PHA2P32452 334 aa3.63□□□□□ -1.83
SPB4YFL002C TMT1P32643 299 aa3.63□□□□□ -1.83
SPB4YFL002C IMP3P32899 183 aaPredicted RBP3.63□□□□□ -1.83
SPB4YFL002C COS9P36034 407 aa3.63□□□□□ -1.83
SPB4YFL002C MIX23P38162 196 aa3.63□□□□□ -1.83
SPB4YFL002C PRM9P39551 298 aa3.63□□□□□ -1.83
SPB4YFL002C YCH1P42937 148 aa3.63□□□□□ -1.83
SPB4YFL002C BNA6P43619 295 aa3.63□□□□□ -1.83
SPB4YFL002C TRF5P48561 642 aaKnown RBP3.63□□□□□ -1.83
SPB4YFL002C KEL2P50090 882 aa3.63□□□□□ -1.83
SPB4YFL002C TRM112P53738 135 aaPredicted RBP3.63□□□□□ -1.83
SPB4YFL002C CSM3Q04659 317 aa3.63□□□□□ -1.83
SPB4YFL002C COX20Q04935 205 aa3.63□□□□□ -1.83
SPB4YFL002C CTS2Q06350 511 aa3.63□□□□□ -1.83
SPB4YFL002C ALE1Q08548 619 aa3.63□□□□□ -1.83
SPB4YFL002C YLR108CQ12259 485 aa3.63□□□□□ -1.83
SPB4YFL002C CHD1P32657 1468 aa3.63□□□□□ -1.83
SPB4YFL002C TDH3P00359 332 aaKnown RBP RIP-Chip data3.63□□□□□ -1.83not detected
SPB4YFL002C COX2P00410 251 aa3.63□□□□□ -1.83
SPB4YFL002C ATR1P13090 542 aa3.63□□□□□ -1.83
SPB4YFL002C VPS3P23643 1011 aa3.63□□□□□ -1.83
SPB4YFL002C SUA5P32579 426 aa3.63□□□□□ -1.83
SPB4YFL002C YBR137WP38276 179 aa3.63□□□□□ -1.83
SPB4YFL002C YER085CP40058 173 aa3.63□□□□□ -1.83
SPB4YFL002C OST1P41543 476 aaKnown RBP3.63□□□□□ -1.83
SPB4YFL002C YJL118WP47022 219 aa3.63□□□□□ -1.83
SPB4YFL002C AIM24P47127 394 aa3.63□□□□□ -1.83
SPB4YFL002C SEH1P53011 349 aaKnown RBP3.63□□□□□ -1.83
SPB4YFL002C HXT11P54862 567 aa3.63□□□□□ -1.83
SPB4YFL002C INP2Q03824 705 aa3.63□□□□□ -1.83
SPB4YFL002C GMC2Q06201 188 aa3.63□□□□□ -1.83
SPB4YFL002C BSC6Q08280 497 aa3.63□□□□□ -1.83
SPB4YFL002C MEX67Q99257 599 aaKnown RBP3.63□□□□□ -1.83
SPB4YFL002C MRS3P10566 314 aa3.62□□□□□ -1.83
SPB4YFL002C CWP1P28319 239 aa3.62□□□□□ -1.83
SPB4YFL002C ITR2P30606 609 aa3.62□□□□□ -1.83
SPB4YFL002C GCG1P32656 232 aaKnown RBP3.62□□□□□ -1.83
SPB4YFL002C PMU1P36069 295 aa3.62□□□□□ -1.83
SPB4YFL002C MTC4P38335 694 aaKnown RBP3.62□□□□□ -1.83
SPB4YFL002C FHL1P39521 936 aa3.62□□□□□ -1.83
SPB4YFL002C RTR1P40084 226 aaPredicted RBP3.62□□□□□ -1.83
SPB4YFL002C RTT101P47050 842 aa3.62□□□□□ -1.83
SPB4YFL002C RIM13Q03792 727 aa3.62□□□□□ -1.83
SPB4YFL002C YLR281CQ05863 155 aa3.62□□□□□ -1.83
SPB4YFL002C BER1Q06688 274 aaKnown RBP3.62□□□□□ -1.83
SPB4YFL002C PBP4Q07362 185 aaKnown RBP3.62□□□□□ -1.83
SPB4YFL002C NDE2Q07500 545 aa3.62□□□□□ -1.83
SPB4YFL002C RGT2Q12300 763 aa3.62□□□□□ -1.83
SPB4YFL002C SET6Q12529 373 aa3.62□□□□□ -1.83
SPB4YFL002C SSK22P25390 1331 aaPredicted RBP3.62□□□□□ -1.83
SPB4YFL002C YSR3P23501 404 aa3.61□□□□□ -1.83
SPB4YFL002C RVS161P25343 265 aaKnown RBP3.61□□□□□ -1.83
SPB4YFL002C POP5P28005 173 aa3.61□□□□□ -1.83
SPB4YFL002C PRS1P32895 427 aaKnown RBP3.61□□□□□ -1.83
SPB4YFL002C YPT35P38815 214 aaKnown RBP3.61□□□□□ -1.83
SPB4YFL002C YIL152WP40455 235 aa3.61□□□□□ -1.83
SPB4YFL002C SHQ1P40486 507 aaPredicted RBP3.61□□□□□ -1.83
SPB4YFL002C XBP1P40489 647 aa3.61□□□□□ -1.83
SPB4YFL002C MSS2P40990 351 aa3.61□□□□□ -1.83
SPB4YFL002C AGP3P43548 558 aa3.61□□□□□ -1.83
SPB4YFL002C IBD2P53892 351 aa3.61□□□□□ -1.83
SPB4YFL002C ERP1Q05359 219 aaKnown RBP3.61□□□□□ -1.83
SPB4YFL002C MDM36Q06820 579 aa3.61□□□□□ -1.83
SPB4YFL002C DSE3Q08729 430 aa3.61□□□□□ -1.83
SPB4YFL002C AYT1Q12226 474 aa3.61□□□□□ -1.83
SPB4YFL002C ATG31Q12421 196 aa3.61□□□□□ -1.83
SPB4YFL002C YNL162W-AQ3E7A8 72 aa3.61□□□□□ -1.83
SPB4YFL002C RAD3P06839 778 aa3.6□□□□□ -1.83
SPB4YFL002C PUT3P25502 979 aaPredicted RBP3.6□□□□□ -1.83
SPB4YFL002C MUD1P32605 298 aaKnown RBP3.6□□□□□ -1.83
SPB4YFL002C SWD2P36104 329 aaPredicted RBP3.6□□□□□ -1.83
SPB4YFL002C SLM1P40485 686 aa3.6□□□□□ -1.83
SPB4YFL002C YJR030CP47101 745 aa3.6□□□□□ -1.83
SPB4YFL002C YPL080CQ02826 108 aa3.6□□□□□ -1.83
SPB4YFL002C DIG1Q03063 452 aaKnown RBP3.6□□□□□ -1.83
Retrieved 100 of 5,963 RNA–protein pairs in 14 ms