RNA–Protein interactions for RNA: YDR299W

BFR2, Transcript of Component of the SSU and 90S preribosomes, yeast

Gene BFR2, Length 1,605 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
BFR2	YDR299W	ERG9	P29704	444 aa		0.78	□□□□□ -2.28
BFR2	YDR299W	MSK1	P32048	576 aa		0.78	□□□□□ -2.28
BFR2	YDR299W	TOA2	P32774	122 aa		0.78	□□□□□ -2.28
BFR2	YDR299W	YKL071W	P36086	256 aa		0.78	□□□□□ -2.28
BFR2	YDR299W	DTR1	P38125	572 aa		0.78	□□□□□ -2.28
BFR2	YDR299W	PCH2	P38126	564 aa		0.78	□□□□□ -2.28
BFR2	YDR299W	PFF1	P38244	976 aa		0.78	□□□□□ -2.28
BFR2	YDR299W	SPP381	P38282	291 aa	Predicted RBP	0.78	□□□□□ -2.28
BFR2	YDR299W	MNL1	P38888	796 aa		0.78	□□□□□ -2.28
BFR2	YDR299W	BAT1	P38891	393 aa	Known RBP	0.78	□□□□□ -2.28
BFR2	YDR299W	CHL4	P38907	458 aa		0.78	□□□□□ -2.28
BFR2	YDR299W	PES4	P39684	611 aa		0.78	□□□□□ -2.28
BFR2	YDR299W	RBG1	P39729	369 aa		0.78	□□□□□ -2.28
BFR2	YDR299W	SNL1	P40548	159 aa		0.78	□□□□□ -2.28
BFR2	YDR299W	YIR035C	P40579	254 aa		0.78	□□□□□ -2.28
BFR2	YDR299W	LCB2	P40970	561 aa		0.78	□□□□□ -2.28
BFR2	YDR299W	YNL320W	P42840	284 aa		0.78	□□□□□ -2.28
BFR2	YDR299W	VAC7	P53950	1165 aa		0.78	□□□□□ -2.28
BFR2	YDR299W	PRP38	Q00723	242 aa	Predicted RBP	0.78	□□□□□ -2.28
BFR2	YDR299W	ENT5	Q03769	411 aa	Known RBP	0.78	□□□□□ -2.28
BFR2	YDR299W	APC4	Q04601	652 aa		0.78	□□□□□ -2.28
BFR2	YDR299W	ECM7	Q06200	448 aa		0.78	□□□□□ -2.28
BFR2	YDR299W	ASA1	Q06822	443 aa		0.78	□□□□□ -2.28
BFR2	YDR299W	DTD1	Q07648	150 aa	Known RBP	0.78	□□□□□ -2.28
BFR2	YDR299W	MFG1	Q07684	458 aa		0.78	□□□□□ -2.28
BFR2	YDR299W	YOL075C	Q08234	1294 aa		0.78	□□□□□ -2.28
BFR2	YDR299W	PEX27	Q08580	376 aa		0.78	□□□□□ -2.28
BFR2	YDR299W	YPS3	Q12303	508 aa		0.78	□□□□□ -2.28
BFR2	YDR299W	APC2	Q12440	853 aa		0.78	□□□□□ -2.28
BFR2	YDR299W	RAX2	Q12465	1220 aa		0.78	□□□□□ -2.28
BFR2	YDR299W	PAR32	Q12515	295 aa	Known RBP	0.78	□□□□□ -2.28
BFR2	YDR299W	UBA3	Q99344	299 aa		0.78	□□□□□ -2.28
BFR2	YDR299W	RPL23A	P0CX41	137 aa	Known RBP	0.78	□□□□□ -2.29
BFR2	YDR299W	RPL23B	P0CX42	137 aa	Known RBP	0.78	□□□□□ -2.29
BFR2	YDR299W	CTA1	P15202	515 aa		0.78	□□□□□ -2.29
BFR2	YDR299W	ARF2	P19146	181 aa	Known RBP	0.78	□□□□□ -2.29
BFR2	YDR299W	CMK2	P22517	447 aa		0.78	□□□□□ -2.29
BFR2	YDR299W	MNE1	P24720	663 aa		0.78	□□□□□ -2.29
BFR2	YDR299W	PHO84	P25297	587 aa	Known RBP	0.78	□□□□□ -2.29
BFR2	YDR299W	RBK1	P25332	333 aa		0.78	□□□□□ -2.29
BFR2	YDR299W	DCC1	P25559	380 aa		0.78	□□□□□ -2.29
BFR2	YDR299W	URA10	P30402	227 aa		0.78	□□□□□ -2.29
BFR2	YDR299W	ITR2	P30606	609 aa		0.78	□□□□□ -2.29
BFR2	YDR299W	PSO2	P30620	661 aa		0.78	□□□□□ -2.29
BFR2	YDR299W	FAA1	P30624	700 aa	Known RBP	0.78	□□□□□ -2.29
BFR2	YDR299W	BLI1	P35727	113 aa		0.78	□□□□□ -2.29
BFR2	YDR299W	MRPL27	P36526	146 aa	Predicted RBP	0.78	□□□□□ -2.29
BFR2	YDR299W	SHE1	P38200	338 aa		0.78	□□□□□ -2.29
BFR2	YDR299W	STP2	P38704	541 aa		0.78	□□□□□ -2.29
BFR2	YDR299W	PFS1	P38872	237 aa		0.78	□□□□□ -2.29
BFR2	YDR299W	FRT2	P39734	528 aa		0.78	□□□□□ -2.29
BFR2	YDR299W	MOB2	P43563	287 aa		0.78	□□□□□ -2.29
BFR2	YDR299W	MIC19	P43594	170 aa		0.78	□□□□□ -2.29
BFR2	YDR299W	KEG1	P43614	200 aa		0.78	□□□□□ -2.29
BFR2	YDR299W	AIM23	P47015	356 aa		0.78	□□□□□ -2.29
BFR2	YDR299W	COQ5	P49017	307 aa		0.78	□□□□□ -2.29
BFR2	YDR299W	YGR015C	P53208	328 aa		0.78	□□□□□ -2.29
BFR2	YDR299W	YGR016W	P53209	190 aa		0.78	□□□□□ -2.29
BFR2	YDR299W	YGR067C	P53243	804 aa		0.78	□□□□□ -2.29
BFR2	YDR299W	COS1	P53822	381 aa		0.78	□□□□□ -2.29
BFR2	YDR299W	SLT2	Q00772	484 aa		0.78	□□□□□ -2.29
BFR2	YDR299W	SED5	Q01590	340 aa		0.78	□□□□□ -2.29
BFR2	YDR299W	MEH1	Q02205	184 aa		0.78	□□□□□ -2.29
BFR2	YDR299W	RPL21A	Q02753	160 aa	Known RBP	0.78	□□□□□ -2.29
BFR2	YDR299W	GMC1	Q04399	608 aa		0.78	□□□□□ -2.29
BFR2	YDR299W	YMR310C	Q04867	317 aa	Predicted RBP	0.78	□□□□□ -2.29
BFR2	YDR299W	GAS2	Q06135	555 aa		0.78	□□□□□ -2.29
BFR2	YDR299W	ALE1	Q08548	619 aa		0.78	□□□□□ -2.29
BFR2	YDR299W	DDC1	Q08949	612 aa		0.78	□□□□□ -2.29
BFR2	YDR299W	GLE1	Q12315	538 aa		0.78	□□□□□ -2.29
BFR2	YDR299W	RPL21B	Q12672	160 aa	Known RBP	0.78	□□□□□ -2.29
BFR2	YDR299W	RGS2	Q99188	309 aa		0.78	□□□□□ -2.29
BFR2	YDR299W	OPI3	P05375	206 aa		0.77	□□□□□ -2.29
BFR2	YDR299W	MAS1	P10507	462 aa		0.77	□□□□□ -2.29
BFR2	YDR299W	UBA1	P22515	1024 aa	Known RBP	0.77	□□□□□ -2.29
BFR2	YDR299W	TPS2	P31688	896 aa	Known RBP	0.77	□□□□□ -2.29
BFR2	YDR299W	ACB1	P31787	87 aa		0.77	□□□□□ -2.29
BFR2	YDR299W	SMF2	P38778	549 aa		0.77	□□□□□ -2.29
BFR2	YDR299W	YPT35	P38815	214 aa	Known RBP	0.77	□□□□□ -2.29
BFR2	YDR299W	YHR122W	P38829	231 aa		0.77	□□□□□ -2.29
BFR2	YDR299W	YER184C	P39961	794 aa		0.77	□□□□□ -2.29
BFR2	YDR299W	YIL054W	P40524	105 aa		0.77	□□□□□ -2.29
BFR2	YDR299W	UFE1	P41834	346 aa		0.77	□□□□□ -2.29
BFR2	YDR299W	CIN2	P46670	268 aa		0.77	□□□□□ -2.29
BFR2	YDR299W	EFM3	P47163	339 aa		0.77	□□□□□ -2.29
BFR2	YDR299W	RSC1	P53236	928 aa		0.77	□□□□□ -2.29
BFR2	YDR299W	YNR068C	P53754	272 aa		0.77	□□□□□ -2.29
BFR2	YDR299W	PRM1	P53835	661 aa		0.77	□□□□□ -2.29
BFR2	YDR299W	CSI1	Q04368	295 aa		0.77	□□□□□ -2.29
BFR2	YDR299W	MGR3	Q04472	501 aa		0.77	□□□□□ -2.29
BFR2	YDR299W	PIN3	Q06449	215 aa		0.77	□□□□□ -2.29
BFR2	YDR299W	SRO7	Q12038	1033 aa		0.77	□□□□□ -2.29
BFR2	YDR299W	ATP16	Q12165	160 aa		0.77	□□□□□ -2.29
BFR2	YDR299W	SPT7	P35177	1332 aa		0.76	□□□□□ -2.29
BFR2	YDR299W	VPS63	O13549	108 aa		0.76	□□□□□ -2.29
BFR2	YDR299W	BGL2	P15703	313 aa	Known RBP	0.76	□□□□□ -2.29
BFR2	YDR299W	GRR1	P24814	1151 aa		0.76	□□□□□ -2.29
BFR2	YDR299W	CHA1	P25379	360 aa	Known RBP	0.76	□□□□□ -2.29
BFR2	YDR299W	VPH2	P32341	215 aa		0.76	□□□□□ -2.29
BFR2	YDR299W	TOA1	P32773	286 aa		0.76	□□□□□ -2.29

Retrieved 100 of 5,963 RNA–protein pairs in 20.8 ms