RNA–Protein interactions for RNA: YDR185C

UPS3, Transcript of Mitochondrial protein of unknown function, yeast

Gene UPS3, Length 540 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
UPS3	YDR185C	YEH2	Q07950	538 aa		4.9	□□□□□ -1.63
UPS3	YDR185C	TPT1	Q12272	230 aa	Known RBP	4.9	□□□□□ -1.63
UPS3	YDR185C	PRP46	Q12417	451 aa	Predicted RBP	4.9	□□□□□ -1.63
UPS3	YDR185C	ADF1	Q2V2Q1	113 aa		4.9	□□□□□ -1.63
UPS3	YDR185C	YOR338W	Q99326	363 aa		4.9	□□□□□ -1.63
UPS3	YDR185C	POM152	P39685	1337 aa		4.9	□□□□□ -1.63
UPS3	YDR185C	TOP2	P06786	1428 aa	Known RBP	4.89	□□□□□ -1.63
UPS3	YDR185C	YPR117W	Q06116	2489 aa		4.89	□□□□□ -1.63
UPS3	YDR185C	RPL42A	P0CX27	106 aa	Known RBP	4.89	□□□□□ -1.63
UPS3	YDR185C	RPL42B	P0CX28	106 aa	Known RBP	4.89	□□□□□ -1.63
UPS3	YDR185C	VPS3	P23643	1011 aa		4.89	□□□□□ -1.63
UPS3	YDR185C	DAL2	P25335	343 aa		4.89	□□□□□ -1.63
UPS3	YDR185C	DOA4	P32571	926 aa		4.89	□□□□□ -1.63
UPS3	YDR185C	SUA5	P32579	426 aa		4.89	□□□□□ -1.63
UPS3	YDR185C	PRS1	P32895	427 aa	Known RBP	4.89	□□□□□ -1.63
UPS3	YDR185C	SKG6	P32900	734 aa	Predicted RBP	4.89	□□□□□ -1.63
UPS3	YDR185C	LOS1	P33418	1100 aa	Predicted RBP	4.89	□□□□□ -1.63
UPS3	YDR185C	YKL162C	P36052	402 aa		4.89	□□□□□ -1.63
UPS3	YDR185C	AZF1	P41696	914 aa		4.89	□□□□□ -1.63
UPS3	YDR185C	NAS6	P50086	228 aa		4.89	□□□□□ -1.63
UPS3	YDR185C	POP6	P53218	158 aa		4.89	□□□□□ -1.63
UPS3	YDR185C	ARK1	P53974	638 aa		4.89	□□□□□ -1.63
UPS3	YDR185C	SPP2	Q02521	185 aa		4.89	□□□□□ -1.63
UPS3	YDR185C	HER2	Q03557	464 aa		4.89	□□□□□ -1.63
UPS3	YDR185C	COX20	Q04935	205 aa		4.89	□□□□□ -1.63
UPS3	YDR185C	YAP7	Q08182	245 aa		4.89	□□□□□ -1.63
UPS3	YDR185C	SLF1	Q12034	447 aa	Known RBP	4.89	□□□□□ -1.63
UPS3	YDR185C	BTS1	Q12051	335 aa		4.89	□□□□□ -1.63
UPS3	YDR185C	PAB1	P04147	577 aa	Known RBP RIP-Chip data	4.88	□□□□□ -1.63	not detected
UPS3	YDR185C	CDC23	P16522	626 aa		4.88	□□□□□ -1.63
UPS3	YDR185C	ARF2	P19146	181 aa	Known RBP	4.88	□□□□□ -1.63
UPS3	YDR185C	PRO3	P32263	286 aa	Known RBP	4.88	□□□□□ -1.63
UPS3	YDR185C	YEF1	P32622	495 aa		4.88	□□□□□ -1.63
UPS3	YDR185C	IMP3	P32899	183 aa	Predicted RBP	4.88	□□□□□ -1.63
UPS3	YDR185C	BMH2	P34730	273 aa	Known RBP	4.88	□□□□□ -1.63
UPS3	YDR185C	MCR1	P36060	302 aa	Known RBP	4.88	□□□□□ -1.63
UPS3	YDR185C	MMS21	P38632	267 aa		4.88	□□□□□ -1.63
UPS3	YDR185C	CCT4	P39078	528 aa	Known RBP	4.88	□□□□□ -1.63
UPS3	YDR185C	DHH1	P39517	506 aa	Known RBP	4.88	□□□□□ -1.63
UPS3	YDR185C	PCL6	P40038	420 aa		4.88	□□□□□ -1.63
UPS3	YDR185C	FMP33	P46998	180 aa		4.88	□□□□□ -1.63
UPS3	YDR185C	AZR1	P50080	613 aa		4.88	□□□□□ -1.63
UPS3	YDR185C	KEL2	P50090	882 aa		4.88	□□□□□ -1.63
UPS3	YDR185C	TAF6	P53040	516 aa		4.88	□□□□□ -1.63
UPS3	YDR185C	SRL4	Q03085	281 aa		4.88	□□□□□ -1.63
UPS3	YDR185C	SAM4	Q08985	325 aa	Known RBP	4.88	□□□□□ -1.63
UPS3	YDR185C	SIA1	Q12212	622 aa		4.88	□□□□□ -1.63
UPS3	YDR185C	YNL162W-A	Q3E7A8	72 aa		4.88	□□□□□ -1.63
UPS3	YDR185C	CFT1	Q06632	1357 aa	Known RBP	4.88	□□□□□ -1.63
UPS3	YDR185C	SNT2	P53127	1403 aa		4.88	□□□□□ -1.63
UPS3	YDR185C	FAR1	P21268	830 aa		4.87	□□□□□ -1.63
UPS3	YDR185C	UTR1	P21373	530 aa		4.87	□□□□□ -1.63
UPS3	YDR185C	GLC7	P32598	312 aa	Known RBP	4.87	□□□□□ -1.63
UPS3	YDR185C	SIP2	P34164	415 aa	Known RBP	4.87	□□□□□ -1.63
UPS3	YDR185C	ATG7	P38862	630 aa		4.87	□□□□□ -1.63
UPS3	YDR185C	YHR182W	P38870	785 aa		4.87	□□□□□ -1.63
UPS3	YDR185C	FHL1	P39521	936 aa		4.87	□□□□□ -1.63
UPS3	YDR185C	RTR1	P40084	226 aa	Predicted RBP	4.87	□□□□□ -1.63
UPS3	YDR185C	SFH5	P47008	294 aa		4.87	□□□□□ -1.63
UPS3	YDR185C	COX16	P47081	118 aa		4.87	□□□□□ -1.63
UPS3	YDR185C	AVT4	P50944	713 aa		4.87	□□□□□ -1.63
UPS3	YDR185C	LST7	P53237	242 aa		4.87	□□□□□ -1.63
UPS3	YDR185C	CTS2	Q06350	511 aa		4.87	□□□□□ -1.63
UPS3	YDR185C	ATX2	Q12067	313 aa		4.87	□□□□□ -1.63
UPS3	YDR185C	RRP12	Q12754	1228 aa	Known RBP	4.87	□□□□□ -1.63
UPS3	YDR185C	UBA3	Q99344	299 aa		4.87	□□□□□ -1.63
UPS3	YDR185C	BUD3	P25558	1636 aa		4.86	□□□□□ -1.63
UPS3	YDR185C	RAD1	P06777	1100 aa		4.86	□□□□□ -1.63
UPS3	YDR185C	SAM2	P19358	384 aa	Known RBP	4.86	□□□□□ -1.63
UPS3	YDR185C	ITR1	P30605	584 aa		4.86	□□□□□ -1.63
UPS3	YDR185C	ARO4	P32449	370 aa	Known RBP	4.86	□□□□□ -1.63
UPS3	YDR185C	SKI2	P35207	1287 aa	Known RBP RIP-Chip data	4.86	□□□□□ -1.63	not detected
UPS3	YDR185C	IST2	P38250	946 aa		4.86	□□□□□ -1.63
UPS3	YDR185C	GEP4	P38812	185 aa		4.86	□□□□□ -1.63
UPS3	YDR185C	MST28	P39552	234 aa		4.86	□□□□□ -1.63
UPS3	YDR185C	FMC1	P40491	155 aa		4.86	□□□□□ -1.63
UPS3	YDR185C	MRX5	P47007	382 aa		4.86	□□□□□ -1.63
UPS3	YDR185C	AIM24	P47127	394 aa		4.86	□□□□□ -1.63
UPS3	YDR185C	PXR1	P53335	271 aa	Predicted RBP	4.86	□□□□□ -1.63
UPS3	YDR185C	ATG38	Q05789	226 aa	Known RBP	4.86	□□□□□ -1.63
UPS3	YDR185C	THI7	Q05998	598 aa		4.86	□□□□□ -1.63
UPS3	YDR185C	YPR172W	Q06608	200 aa		4.86	□□□□□ -1.63
UPS3	YDR185C	BSC6	Q08280	497 aa		4.86	□□□□□ -1.63
UPS3	YDR185C	YPL199C	Q08954	240 aa		4.86	□□□□□ -1.63
UPS3	YDR185C	AHC1	Q12433	566 aa		4.86	□□□□□ -1.63
UPS3	YDR185C	PRB1	P09232	635 aa		4.85	□□□□□ -1.63
UPS3	YDR185C	SSC1	P0CS90	654 aa	Known RBP	4.85	□□□□□ -1.63
UPS3	YDR185C	CAP2	P13517	287 aa		4.85	□□□□□ -1.63
UPS3	YDR185C	FRS2	P15625	503 aa	Known RBP	4.85	□□□□□ -1.63
UPS3	YDR185C	RBK1	P25332	333 aa		4.85	□□□□□ -1.63
UPS3	YDR185C	POP5	P28005	173 aa		4.85	□□□□□ -1.63
UPS3	YDR185C	TMT1	P32643	299 aa		4.85	□□□□□ -1.63
UPS3	YDR185C	GCG1	P32656	232 aa	Known RBP	4.85	□□□□□ -1.63
UPS3	YDR185C	CHK1	P38147	527 aa		4.85	□□□□□ -1.63
UPS3	YDR185C	HIS2	P38635	335 aa		4.85	□□□□□ -1.63
UPS3	YDR185C	SBE22	P38814	852 aa		4.85	□□□□□ -1.63
UPS3	YDR185C	RBG1	P39729	369 aa		4.85	□□□□□ -1.63
UPS3	YDR185C	AIM10	P39965	576 aa	Known RBP	4.85	□□□□□ -1.63
UPS3	YDR185C	HAT2	P39984	401 aa		4.85	□□□□□ -1.63
UPS3	YDR185C	YJL118W	P47022	219 aa		4.85	□□□□□ -1.63

Retrieved 100 of 5,963 RNA–protein pairs in 19.2 ms