RNA–Protein interactions for RNA: YDL091C

UBX3, Transcript of Subunit of the DSC ubiquitin ligase complex, yeastyeast

Gene UBX3, Length 1,368 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBX3YDL091C APC5Q08683 685 aa2.43□□□□□ -2.02
UBX3YDL091C KDX1P36005 433 aa2.42□□□□□ -2.02
UBX3YDL091C LSM12P38828 187 aaKnown RBP2.42□□□□□ -2.02
UBX3YDL091C VHT1P53241 593 aa2.42□□□□□ -2.02
UBX3YDL091C APC2Q12440 853 aa2.42□□□□□ -2.02
UBX3YDL091C CHD1P32657 1468 aa2.41□□□□□ -2.02
UBX3YDL091C STE7P06784 515 aa2.41□□□□□ -2.02
UBX3YDL091C GIT1P25346 518 aa2.41□□□□□ -2.02
UBX3YDL091C FAA1P30624 700 aaKnown RBP2.41□□□□□ -2.02
UBX3YDL091C ZUO1P32527 433 aaKnown RBP2.41□□□□□ -2.02
UBX3YDL091C TOA2P32774 122 aa2.41□□□□□ -2.02
UBX3YDL091C TIR2P33890 251 aa2.41□□□□□ -2.02
UBX3YDL091C RPC37P36121 282 aa2.41□□□□□ -2.02
UBX3YDL091C DTR1P38125 572 aa2.41□□□□□ -2.02
UBX3YDL091C LYS12P40495 371 aaKnown RBP2.41□□□□□ -2.02
UBX3YDL091C KEG1P43614 200 aa2.41□□□□□ -2.02
UBX3YDL091C RRB1Q04225 511 aaKnown RBP2.41□□□□□ -2.02
UBX3YDL091C YMR310CQ04867 317 aaPredicted RBP2.41□□□□□ -2.02
UBX3YDL091C ARR1Q06596 294 aa2.41□□□□□ -2.02
UBX3YDL091C CLP1Q08685 445 aaPredicted RBP2.41□□□□□ -2.02
UBX3YDL091C MCT1Q12283 360 aa2.41□□□□□ -2.02
UBX3YDL091C RAX2Q12465 1220 aa2.41□□□□□ -2.02
UBX3YDL091C STH1P32597 1359 aa2.41□□□□□ -2.02
UBX3YDL091C UBA1P22515 1024 aaKnown RBP2.4□□□□□ -2.02
UBX3YDL091C MSK1P32048 576 aa2.4□□□□□ -2.02
UBX3YDL091C SPO23P33757 523 aa2.4□□□□□ -2.02
UBX3YDL091C YSW1P38280 609 aa2.4□□□□□ -2.02
UBX3YDL091C YHR182WP38870 785 aa2.4□□□□□ -2.02
UBX3YDL091C YIL089WP40500 205 aa2.4□□□□□ -2.02
UBX3YDL091C GPI8P49018 411 aa2.4□□□□□ -2.02
UBX3YDL091C PMT5P52867 743 aa2.4□□□□□ -2.02
UBX3YDL091C PRM1P53835 661 aa2.4□□□□□ -2.02
UBX3YDL091C YHC1Q05900 231 aaKnown RBP2.4□□□□□ -2.02
UBX3YDL091C MCH1Q07376 486 aa2.4□□□□□ -2.02
UBX3YDL091C SHS1Q07657 551 aa2.4□□□□□ -2.02
UBX3YDL091C SSK22P25390 1331 aaPredicted RBP2.4□□□□□ -2.03
UBX3YDL091C TPI1P00942 248 aaKnown RBP2.39□□□□□ -2.03
UBX3YDL091C MAS1P10507 462 aa2.39□□□□□ -2.03
UBX3YDL091C MER1P16523 270 aa2.39□□□□□ -2.03
UBX3YDL091C RPB4P20433 221 aaPredicted RBP2.39□□□□□ -2.03
UBX3YDL091C RDS1P25611 832 aa2.39□□□□□ -2.03
UBX3YDL091C PSO2P30620 661 aa2.39□□□□□ -2.03
UBX3YDL091C HMX1P32339 317 aa2.39□□□□□ -2.03
UBX3YDL091C SSE1P32589 693 aaKnown RBP2.39□□□□□ -2.03
UBX3YDL091C BMT2P38278 337 aa2.39□□□□□ -2.03
UBX3YDL091C CHL4P38907 458 aa2.39□□□□□ -2.03
UBX3YDL091C PET100P38958 111 aa2.39□□□□□ -2.03
UBX3YDL091C CAJ1P39101 391 aa2.39□□□□□ -2.03
UBX3YDL091C MEP1P40260 492 aa2.39□□□□□ -2.03
UBX3YDL091C YFL012WP43580 148 aa2.39□□□□□ -2.03
UBX3YDL091C TRF5P48561 642 aaKnown RBP2.39□□□□□ -2.03
UBX3YDL091C PXR1P53335 271 aaPredicted RBP2.39□□□□□ -2.03
UBX3YDL091C YNR068CP53754 272 aa2.39□□□□□ -2.03
UBX3YDL091C AQR1P53943 586 aa2.39□□□□□ -2.03
UBX3YDL091C RUD3Q12234 484 aaKnown RBP2.39□□□□□ -2.03
UBX3YDL091C YOR338WQ99326 363 aa2.39□□□□□ -2.03
UBX3YDL091C RPS18AP0CX55 146 aaKnown RBP2.38□□□□□ -2.03
UBX3YDL091C RPS18BP0CX56 146 aaPredicted RBP2.38□□□□□ -2.03
UBX3YDL091C MAS2P11914 482 aa2.38□□□□□ -2.03
UBX3YDL091C CMK2P22517 447 aa2.38□□□□□ -2.03
UBX3YDL091C RPL16AP26784 199 aaKnown RBP2.38□□□□□ -2.03
UBX3YDL091C SMI1P32566 505 aa2.38□□□□□ -2.03
UBX3YDL091C ARC19P33204 171 aaKnown RBP2.38□□□□□ -2.03
UBX3YDL091C COY1P34237 679 aa2.38□□□□□ -2.03
UBX3YDL091C ABM1P47146 123 aa2.38□□□□□ -2.03
UBX3YDL091C YNL050CP53952 270 aa2.38□□□□□ -2.03
UBX3YDL091C REX2P54964 269 aaKnown RBP2.38□□□□□ -2.03
UBX3YDL091C RPL21AQ02753 160 aaKnown RBP2.38□□□□□ -2.03
UBX3YDL091C RPL21BQ12672 160 aaKnown RBP2.38□□□□□ -2.03
UBX3YDL091C FSH3Q99369 266 aa2.38□□□□□ -2.03
UBX3YDL091C RAD3P06839 778 aa2.37□□□□□ -2.03
UBX3YDL091C SCH9P11792 824 aaKnown RBP2.37□□□□□ -2.03
UBX3YDL091C TAL1P15019 335 aaKnown RBP2.37□□□□□ -2.03
UBX3YDL091C CHA1P25379 360 aaKnown RBP2.37□□□□□ -2.03
UBX3YDL091C SKI2P35207 1287 aaKnown RBP RIP-Chip data2.37□□□□□ -2.03not detected
UBX3YDL091C DSN1P40568 576 aa2.37□□□□□ -2.03
UBX3YDL091C SEH1P53011 349 aaKnown RBP2.37□□□□□ -2.03
UBX3YDL091C CUE3P53137 624 aaKnown RBP2.37□□□□□ -2.03
UBX3YDL091C RET3P53600 189 aa2.37□□□□□ -2.03
UBX3YDL091C ENT5Q03769 411 aaKnown RBP2.37□□□□□ -2.03
UBX3YDL091C VTI1Q04338 217 aa2.37□□□□□ -2.03
UBX3YDL091C YMR111CQ04461 462 aaPredicted RBP2.37□□□□□ -2.03
UBX3YDL091C DBP9Q06218 594 aaKnown RBP2.37□□□□□ -2.03
UBX3YDL091C NOP6Q07623 225 aaKnown RBP2.37□□□□□ -2.03
UBX3YDL091C YOL075CQ08234 1294 aa2.37□□□□□ -2.03
UBX3YDL091C SFM1Q12314 213 aa2.37□□□□□ -2.03
UBX3YDL091C TRX1P22217 103 aaKnown RBP2.36□□□□□ -2.03
UBX3YDL091C LDS1P31379 325 aa2.36□□□□□ -2.03
UBX3YDL091C COS9P36034 407 aa2.36□□□□□ -2.03
UBX3YDL091C YKR015CP36111 568 aa2.36□□□□□ -2.03
UBX3YDL091C SOL2P37262 315 aa2.36□□□□□ -2.03
UBX3YDL091C YHR177WP38867 453 aa2.36□□□□□ -2.03
UBX3YDL091C PES4P39684 611 aa2.36□□□□□ -2.03
UBX3YDL091C RBG1P39729 369 aa2.36□□□□□ -2.03
UBX3YDL091C HST1P53685 503 aa2.36□□□□□ -2.03
UBX3YDL091C VAC7P53950 1165 aa2.36□□□□□ -2.03
UBX3YDL091C PRP38Q00723 242 aaPredicted RBP2.36□□□□□ -2.03
UBX3YDL091C MSC3Q05812 728 aa2.36□□□□□ -2.03
UBX3YDL091C STF1P01098 86 aa2.36□□□□□ -2.03
UBX3YDL091C YLL053CP0CD98 152 aa2.36□□□□□ -2.03
Retrieved 100 of 5,963 RNA–protein pairs in 20.6 ms