RNA–Protein interactions for RNA: YAL030W

SNC1, Transcript of Vesicle membrane receptor protein (v-SNARE), yeastyeast

Gene SNC1, Length 354 nt, Biotype protein coding, Subcellular localisation Cellular bud, Cytosol, Endoplasmic reticulum, Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SNC1YAL030W PNC1P53184 216 aaKnown RBP1.9□□□□□ -2.11
SNC1YAL030W WSC2P53832 503 aa1.9□□□□□ -2.11
SNC1YAL030W YNL260CP53846 198 aa1.9□□□□□ -2.11
SNC1YAL030W MTQ1P53944 314 aa1.9□□□□□ -2.11
SNC1YAL030W BUR2Q05949 395 aa1.9□□□□□ -2.11
SNC1YAL030W KAP95Q06142 861 aaKnown RBP1.9□□□□□ -2.11
SNC1YAL030W BCP1Q06338 283 aa1.9□□□□□ -2.11
SNC1YAL030W CMS1Q07897 291 aaKnown RBP1.9□□□□□ -2.11
SNC1YAL030W GAT3Q07928 141 aa1.9□□□□□ -2.11
SNC1YAL030W DNL4Q08387 944 aaPredicted RBP1.9□□□□□ -2.11
SNC1YAL030W YGK3Q12222 375 aaPredicted RBP1.9□□□□□ -2.11
SNC1YAL030W PAA1Q12447 191 aaKnown RBP1.9□□□□□ -2.11
SNC1YAL030W YPR1Q12458 312 aa1.9□□□□□ -2.11
SNC1YAL030W MRPL23Q12487 163 aaPredicted RBP1.9□□□□□ -2.11
SNC1YAL030W HTZ1Q12692 134 aaKnown RBP1.9□□□□□ -2.11
SNC1YAL030W YER078W-AQ3E7A2 54 aa1.9□□□□□ -2.11
SNC1YAL030W YCR024C-BQ3E7Z8 88 aa1.9□□□□□ -2.11
SNC1YAL030W YCL021W-AQ96VH3 125 aa1.9□□□□□ -2.11
SNC1YAL030W HHF1P02309 103 aaKnown RBP1.89□□□□□ -2.11
SNC1YAL030W RAD1P06777 1100 aa1.89□□□□□ -2.11
SNC1YAL030W MSI1P13712 422 aa1.89□□□□□ -2.11
SNC1YAL030W MEK1P24719 497 aaPredicted RBP1.89□□□□□ -2.11
SNC1YAL030W YUR1P26725 428 aa1.89□□□□□ -2.11
SNC1YAL030W POP5P28005 173 aa1.89□□□□□ -2.11
SNC1YAL030W HXT1P32465 570 aa1.89□□□□□ -2.11
SNC1YAL030W SPO23P33757 523 aa1.89□□□□□ -2.11
SNC1YAL030W MYO3P36006 1272 aa1.89□□□□□ -2.11
SNC1YAL030W YKL070WP36087 169 aa1.89□□□□□ -2.11
SNC1YAL030W YPT35P38815 214 aaKnown RBP1.89□□□□□ -2.11
SNC1YAL030W ATG7P38862 630 aa1.89□□□□□ -2.11
SNC1YAL030W SMC2P38989 1170 aaKnown RBP1.89□□□□□ -2.11
SNC1YAL030W YAT2P40017 923 aa1.89□□□□□ -2.11
SNC1YAL030W YIL067CP40514 678 aa1.89□□□□□ -2.11
SNC1YAL030W REE1P40893 198 aa1.89□□□□□ -2.11
SNC1YAL030W WWM1P43582 211 aaKnown RBP1.89□□□□□ -2.11
SNC1YAL030W LCB3P47013 409 aa1.89□□□□□ -2.11
SNC1YAL030W NAS6P50086 228 aa1.89□□□□□ -2.11
SNC1YAL030W SCS3P53012 380 aa1.89□□□□□ -2.11
SNC1YAL030W MST27P53176 234 aa1.89□□□□□ -2.11
SNC1YAL030W YGR168CP53293 376 aa1.89□□□□□ -2.11
SNC1YAL030W OKP1P53298 406 aa1.89□□□□□ -2.11
SNC1YAL030W MTM1P53320 366 aa1.89□□□□□ -2.11
SNC1YAL030W CWC22P53333 577 aaKnown RBP1.89□□□□□ -2.11
SNC1YAL030W PXR1P53335 271 aaPredicted RBP1.89□□□□□ -2.11
SNC1YAL030W TDA1Q03533 586 aa1.89□□□□□ -2.11
SNC1YAL030W YMR027WQ04371 470 aa1.89□□□□□ -2.11
SNC1YAL030W CSM3Q04659 317 aa1.89□□□□□ -2.11
SNC1YAL030W FDH1Q08911 376 aa1.89□□□□□ -2.11
SNC1YAL030W SLF1Q12034 447 aaKnown RBP1.89□□□□□ -2.11
SNC1YAL030W ICT1Q12385 394 aa1.89□□□□□ -2.11
SNC1YAL030W DET1Q99288 334 aaKnown RBP1.89□□□□□ -2.11
SNC1YAL030W UBA3Q99344 299 aa1.89□□□□□ -2.11
SNC1YAL030W SPT15P13393 240 aaKnown RBP1.88□□□□□ -2.11
SNC1YAL030W RPL16AP26784 199 aaKnown RBP1.88□□□□□ -2.11
SNC1YAL030W MKK1P32490 508 aa1.88□□□□□ -2.11
SNC1YAL030W ECT1P33412 323 aa1.88□□□□□ -2.11
SNC1YAL030W YKL162CP36052 402 aa1.88□□□□□ -2.11
SNC1YAL030W AVT5P38176 459 aa1.88□□□□□ -2.11
SNC1YAL030W YMR262WP38430 313 aa1.88□□□□□ -2.11
SNC1YAL030W MMS21P38632 267 aa1.88□□□□□ -2.11
SNC1YAL030W CTM1P38818 585 aa1.88□□□□□ -2.11
SNC1YAL030W LSM12P38828 187 aaKnown RBP1.88□□□□□ -2.11
SNC1YAL030W FET3P38993 636 aa1.88□□□□□ -2.11
SNC1YAL030W PTI1P39927 425 aaPredicted RBP1.88□□□□□ -2.11
SNC1YAL030W YCH1P42937 148 aa1.88□□□□□ -2.11
SNC1YAL030W AIM24P47127 394 aa1.88□□□□□ -2.11
SNC1YAL030W MND1P53102 219 aa1.88□□□□□ -2.11
SNC1YAL030W LSG1P53145 640 aaKnown RBP1.88□□□□□ -2.11
SNC1YAL030W CLD1P53264 445 aa1.88□□□□□ -2.11
SNC1YAL030W MKC7P53379 596 aa1.88□□□□□ -2.11
SNC1YAL030W CWC25P53854 179 aaKnown RBP1.88□□□□□ -2.11
SNC1YAL030W YNL050CP53952 270 aa1.88□□□□□ -2.11
SNC1YAL030W NUP116Q02630 1113 aa1.88□□□□□ -2.11
SNC1YAL030W RRN5Q02983 363 aa1.88□□□□□ -2.11
SNC1YAL030W YMR010WQ03687 405 aa1.88□□□□□ -2.11
SNC1YAL030W RTN1Q04947 295 aaKnown RBP1.88□□□□□ -2.11
SNC1YAL030W PBA1Q05778 276 aa1.88□□□□□ -2.11
SNC1YAL030W RIF2Q06208 395 aa1.88□□□□□ -2.11
SNC1YAL030W YPR091CQ06833 770 aa1.88□□□□□ -2.11
SNC1YAL030W TSR1Q07381 788 aaKnown RBP1.88□□□□□ -2.11
SNC1YAL030W NDD1Q08887 554 aa1.88□□□□□ -2.11
SNC1YAL030W SIA1Q12212 622 aa1.88□□□□□ -2.11
SNC1YAL030W YRM1Q12340 786 aa1.88□□□□□ -2.11
SNC1YAL030W JID1Q12350 301 aa1.88□□□□□ -2.11
SNC1YAL030W STE2D6VTK4 431 aa1.87□□□□□ -2.11
SNC1YAL030W HEM4P06174 275 aa1.87□□□□□ -2.11
SNC1YAL030W FRS2P15625 503 aaKnown RBP1.87□□□□□ -2.11
SNC1YAL030W GPI12P23797 304 aa1.87□□□□□ -2.11
SNC1YAL030W DAL2P25335 343 aa1.87□□□□□ -2.11
SNC1YAL030W CHA1P25379 360 aaKnown RBP1.87□□□□□ -2.11
SNC1YAL030W ITR2P30606 609 aa1.87□□□□□ -2.11
SNC1YAL030W RAD23P32628 398 aaKnown RBP1.87□□□□□ -2.11
SNC1YAL030W YBL059WP34224 193 aa1.87□□□□□ -2.11
SNC1YAL030W YUH1P35127 236 aa1.87□□□□□ -2.11
SNC1YAL030W PTH1P38876 190 aaKnown RBP1.87□□□□□ -2.11
SNC1YAL030W RCY1P39531 840 aa1.87□□□□□ -2.11
SNC1YAL030W HAC1P41546 238 aa1.87□□□□□ -2.11
SNC1YAL030W YFL040WP43562 540 aa1.87□□□□□ -2.11
SNC1YAL030W CIN2P46670 268 aa1.87□□□□□ -2.11
SNC1YAL030W CTK3P46963 296 aaPredicted RBP1.87□□□□□ -2.11
Retrieved 100 of 5,963 RNA–protein pairs in 98 ms