RNA–Protein interactions for RNA: ENST00000553096.5

BEST3-212, Transcript of bestrophin 3, humanhuman

TSL 1 (best) BASIC

Gene BEST3, Length 2,929 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3-212ENST00000553096 RASSF9O75901 435 aa8□□□□□ -1.13
BEST3-212ENST00000553096 NEBLO76041 1014 aa8□□□□□ -1.13
BEST3-212ENST00000553096 GDF11O95390 407 aa8□□□□□ -1.13
BEST3-212ENST00000553096 GNA14O95837 355 aa8□□□□□ -1.13
BEST3-212ENST00000553096 COL2A1P02458 1487 aaPredicted RBP8□□□□□ -1.13
BEST3-212ENST00000553096 HLA-DOAP06340 250 aa8□□□□□ -1.13
BEST3-212ENST00000553096 MYBP10242 640 aa8□□□□□ -1.13
BEST3-212ENST00000553096 YBX3P16989 372 aaKnown RBP eCLIP8□□□□□ -1.13
BEST3-212ENST00000553096 GRB10Q13322 594 aa8□□□□□ -1.13
BEST3-212ENST00000553096 ECM1Q16610 540 aa8□□□□□ -1.13
BEST3-212ENST00000553096 PREPLQ4J6C6 727 aaPredicted RBP8□□□□□ -1.13
BEST3-212ENST00000553096 CEP85LQ5SZL2 805 aa8□□□□□ -1.13
BEST3-212ENST00000553096 DCAF8Q5TAQ9 597 aa8□□□□□ -1.13
BEST3-212ENST00000553096 ATRNL1Q5VV63 1379 aa8□□□□□ -1.13
BEST3-212ENST00000553096 C6orf89Q6UWU4 347 aa8□□□□□ -1.13
BEST3-212ENST00000553096 CCDC13Q8IYE1 715 aa8□□□□□ -1.13
BEST3-212ENST00000553096 ZNF713Q8N859 430 aaPredicted RBP8□□□□□ -1.13
BEST3-212ENST00000553096 KIAA0895Q8NCT3 520 aa8□□□□□ -1.13
BEST3-212ENST00000553096 CCDC26Q8TAB7 109 aa8□□□□□ -1.13
BEST3-212ENST00000553096 CASKIN2Q8WXE0 1202 aa8□□□□□ -1.13
BEST3-212ENST00000553096 PSMB7Q99436 277 aa8□□□□□ -1.13
BEST3-212ENST00000553096 NUDT12Q9BQG2 462 aa8□□□□□ -1.13
BEST3-212ENST00000553096 SYNPO2Q9UMS6 1093 aa8□□□□□ -1.13
BEST3-212ENST00000553096 ATP8B3O60423 1300 aa8□□□□□ -1.13
BEST3-212ENST00000553096 PALMO75781 387 aa8□□□□□ -1.13
BEST3-212ENST00000553096 NEFHP12036 1026 aa8□□□□□ -1.13
BEST3-212ENST00000553096 FCER1AP12319 257 aa8□□□□□ -1.13
BEST3-212ENST00000553096 NF2P35240 595 aa8□□□□□ -1.13
BEST3-212ENST00000553096 SLC1A4P43007 532 aa8□□□□□ -1.13
BEST3-212ENST00000553096 ATP2B2Q01814 1243 aa8□□□□□ -1.13
BEST3-212ENST00000553096 GFPT1Q06210 699 aaPredicted RBP8□□□□□ -1.13
BEST3-212ENST00000553096 SEPT2Q15019 361 aa8□□□□□ -1.13
BEST3-212ENST00000553096 SOGA3Q5TF21 947 aa8□□□□□ -1.13
BEST3-212ENST00000553096 MYLK4Q86YV6 388 aaPredicted RBP8□□□□□ -1.13
BEST3-212ENST00000553096 USP38Q8NB14 1042 aa8□□□□□ -1.13
BEST3-212ENST00000553096 CYFIP2Q96F07 1278 aa8□□□□□ -1.13
BEST3-212ENST00000553096 CCDC114Q96M63 670 aa8□□□□□ -1.13
BEST3-212ENST00000553096 INPP4AQ96PE3 977 aaPredicted RBP8□□□□□ -1.13
BEST3-212ENST00000553096 KRT12Q99456 494 aa8□□□□□ -1.13
BEST3-212ENST00000553096 HINFPQ9BQA5 517 aa8□□□□□ -1.13
BEST3-212ENST00000553096 RAB34Q9BZG1 259 aa8□□□□□ -1.13
BEST3-212ENST00000553096 TDRD3Q9H7E2 651 aaKnown RBP8□□□□□ -1.13
BEST3-212ENST00000553096 BLOC1S4Q9NUP1 217 aa8□□□□□ -1.13
BEST3-212ENST00000553096 SERPINA10Q9UK55 444 aa8□□□□□ -1.13
BEST3-212ENST00000553096 DCAF8L1A6NGE4 600 aa7.99□□□□□ -1.13
BEST3-212ENST00000553096 POTEMA6NI47 508 aa7.99□□□□□ -1.13
BEST3-212ENST00000553096 BUB1O43683 1085 aa7.99□□□□□ -1.13
BEST3-212ENST00000553096 PAEPP09466 180 aa7.99□□□□□ -1.13
BEST3-212ENST00000553096 FAM153BP0C7A2 387 aa7.99□□□□□ -1.13
BEST3-212ENST00000553096 DPEP1P16444 411 aa7.99□□□□□ -1.13
BEST3-212ENST00000553096 GUCY2FP51841 1108 aa7.99□□□□□ -1.13
BEST3-212ENST00000553096 SNAP25P60880 206 aa7.99□□□□□ -1.13
BEST3-212ENST00000553096 HDLBPQ00341 1268 aaKnown RBP7.99□□□□□ -1.13
BEST3-212ENST00000553096 IFT88Q13099 833 aa7.99□□□□□ -1.13
BEST3-212ENST00000553096 E2F5Q15329 346 aa7.99□□□□□ -1.13
BEST3-212ENST00000553096 SNCBQ16143 134 aa7.99□□□□□ -1.13
BEST3-212ENST00000553096 TMEM266Q2M3C6 531 aa7.99□□□□□ -1.13
BEST3-212ENST00000553096 FAM153CQ494X1 144 aa7.99□□□□□ -1.13
BEST3-212ENST00000553096 SPDYCQ5MJ68 293 aa7.99□□□□□ -1.13
BEST3-212ENST00000553096 HGSNATQ68CP4 663 aa7.99□□□□□ -1.13
BEST3-212ENST00000553096 PPP1R18Q6NYC8 613 aa7.99□□□□□ -1.13
BEST3-212ENST00000553096 HAS1Q92839 578 aa7.99□□□□□ -1.13
BEST3-212ENST00000553096 HPS3Q969F9 1004 aa7.99□□□□□ -1.13
BEST3-212ENST00000553096 ZKSCAN4Q969J2 545 aaPredicted RBP7.99□□□□□ -1.13
BEST3-212ENST00000553096 CDK5RAP3Q96JB5 506 aa7.99□□□□□ -1.13
BEST3-212ENST00000553096 PRMT6Q96LA8 375 aaPredicted RBP7.99□□□□□ -1.13
BEST3-212ENST00000553096 JPH2Q9BR39 696 aaPredicted RBP7.99□□□□□ -1.13
BEST3-212ENST00000553096 SMARCAL1Q9NZC9 954 aa7.99□□□□□ -1.13
BEST3-212ENST00000553096 EHD2Q9NZN4 543 aa7.99□□□□□ -1.13
BEST3-212ENST00000553096 FAM153AQ9UHL3 310 aa7.99□□□□□ -1.13
BEST3-212ENST00000553096 CCDC188H7C350 402 aa7.99□□□□□ -1.13
BEST3-212ENST00000553096 ZBTB5O15062 677 aa7.99□□□□□ -1.13
BEST3-212ENST00000553096 EPHB6O15197 1021 aa7.99□□□□□ -1.13
BEST3-212ENST00000553096 GHRP10912 638 aa7.99□□□□□ -1.13
BEST3-212ENST00000553096 SLC8A1P32418 973 aa7.99□□□□□ -1.13
BEST3-212ENST00000553096 FXR2P51116 673 aaKnown RBP eCLIP7.99□□□□□ -1.13
BEST3-212ENST00000553096 TRAF1Q13077 416 aa7.99□□□□□ -1.13
BEST3-212ENST00000553096 HLTFQ14527 1009 aaKnown RBP eCLIP7.99□□□□□ -1.13
BEST3-212ENST00000553096 SLC18A3Q16572 532 aa7.99□□□□□ -1.13
BEST3-212ENST00000553096 QRICH1Q2TAL8 776 aa7.99□□□□□ -1.13
BEST3-212ENST00000553096 CERKLQ49MI3 558 aaPredicted RBP7.99□□□□□ -1.13
BEST3-212ENST00000553096 WLSQ5T9L3 541 aa7.99□□□□□ -1.13
BEST3-212ENST00000553096 KCNK18Q7Z418 384 aa7.99□□□□□ -1.13
BEST3-212ENST00000553096 CEP63Q96MT8 703 aa7.99□□□□□ -1.13
BEST3-212ENST00000553096 TANGO6Q9C0B7 1094 aa7.99□□□□□ -1.13
BEST3-212ENST00000553096 CNOT10Q9H9A5 744 aaKnown RBP7.99□□□□□ -1.13
BEST3-212ENST00000553096 SLC40A1Q9NP59 571 aa7.99□□□□□ -1.13
BEST3-212ENST00000553096 SLC39A2Q9NP94 309 aa7.99□□□□□ -1.13
BEST3-212ENST00000553096 SALL4Q9UJQ4 1053 aa7.99□□□□□ -1.13
BEST3-212ENST00000553096 TMEM59LQ9UK28 342 aa7.99□□□□□ -1.13
BEST3-212ENST00000553096 CNTNAP1P78357 1384 aa7.99□□□□□ -1.13
BEST3-212ENST00000553096 C5orf60A6NFR6 353 aa7.99□□□□□ -1.13
BEST3-212ENST00000553096 IPO5O00410 1097 aaKnown RBP7.99□□□□□ -1.13
BEST3-212ENST00000553096 TRAPPC3O43617 180 aa7.99□□□□□ -1.13
BEST3-212ENST00000553096 SETSIPP0DME0 302 aa7.99□□□□□ -1.13
BEST3-212ENST00000553096 EZRP15311 586 aaKnown RBP7.99□□□□□ -1.13
BEST3-212ENST00000553096 KCNA3P22001 575 aa7.99□□□□□ -1.13
BEST3-212ENST00000553096 ANXA13P27216 316 aa7.99□□□□□ -1.13
BEST3-212ENST00000553096 TXKP42681 527 aa7.99□□□□□ -1.13
BEST3-212ENST00000553096 RPS6KA1Q15418 735 aa7.99□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms