RNA–Protein interactions for RNA: ENST00000424339.1

EPHA4-206, Transcript of EPH receptor A4, humanhuman

TSL 2

Gene EPHA4, Length 492 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4-206ENST00000424339 SFNP31947 248 aa7.91□□□□□ -1.14
EPHA4-206ENST00000424339 MCM7P33993 719 aa7.91□□□□□ -1.14
EPHA4-206ENST00000424339 NASPP49321 788 aaPredicted RBP7.91□□□□□ -1.14
EPHA4-206ENST00000424339 TOB1P50616 345 aaPredicted RBP7.91□□□□□ -1.14
EPHA4-206ENST00000424339 NKX3-2P78367 333 aa7.91□□□□□ -1.14
EPHA4-206ENST00000424339 ATP2C1P98194 919 aaPredicted RBP7.91□□□□□ -1.14
EPHA4-206ENST00000424339 CACNB2Q08289 660 aaPredicted RBP7.91□□□□□ -1.14
EPHA4-206ENST00000424339 TMEM266Q2M3C6 531 aa7.91□□□□□ -1.14
EPHA4-206ENST00000424339 CCDC144BQ3MJ40 725 aa7.91□□□□□ -1.14
EPHA4-206ENST00000424339 EARS2Q5JPH6 523 aaKnown RBP7.91□□□□□ -1.14
EPHA4-206ENST00000424339 ANO1Q5XXA6 986 aa7.91□□□□□ -1.14
EPHA4-206ENST00000424339 ZNF746Q6NUN9 644 aaPredicted RBP7.91□□□□□ -1.14
EPHA4-206ENST00000424339 TAPT1Q6NXT6 567 aa7.91□□□□□ -1.14
EPHA4-206ENST00000424339 CCDC62Q6P9F0 684 aa7.91□□□□□ -1.14
EPHA4-206ENST00000424339 SEPT14Q6ZU15 432 aa7.91□□□□□ -1.14
EPHA4-206ENST00000424339 SMAP1Q8IYB5 467 aaPredicted RBP7.91□□□□□ -1.14
EPHA4-206ENST00000424339 ETNPPLQ8TBG4 499 aa7.91□□□□□ -1.14
EPHA4-206ENST00000424339 KCNG4Q8TDN1 519 aa7.91□□□□□ -1.14
EPHA4-206ENST00000424339 SLC5A5Q92911 643 aa7.91□□□□□ -1.14
EPHA4-206ENST00000424339 AK8Q96MA6 479 aa7.91□□□□□ -1.14
EPHA4-206ENST00000424339 ZNF577Q9BSK1 485 aa7.91□□□□□ -1.14
EPHA4-206ENST00000424339 GRIP2Q9C0E4 1043 aa7.91□□□□□ -1.14
EPHA4-206ENST00000424339 AGO4Q9HCK5 861 aaKnown RBP7.91□□□□□ -1.14
EPHA4-206ENST00000424339 RTEL1Q9NZ71 1219 aa7.91□□□□□ -1.14
EPHA4-206ENST00000424339 DDX20Q9UHI6 824 aaKnown RBP7.91□□□□□ -1.14
EPHA4-206ENST00000424339 DDX41Q9UJV9 622 aaKnown RBP7.91□□□□□ -1.14
EPHA4-206ENST00000424339 PCDHA12Q9UN75 941 aa7.91□□□□□ -1.14
EPHA4-206ENST00000424339 SCO2A0A1W2PP80 73 aa7.9□□□□□ -1.14
EPHA4-206ENST00000424339 NOP56O00567 594 aaKnown RBP7.9□□□□□ -1.14
EPHA4-206ENST00000424339 MSH4O15457 936 aa7.9□□□□□ -1.14
EPHA4-206ENST00000424339 ZEB2O60315 1214 aa7.9□□□□□ -1.14
EPHA4-206ENST00000424339 DKC1O60832 514 aaKnown RBP eCLIP7.9□□□□□ -1.14
EPHA4-206ENST00000424339 GAS7O60861 476 aa7.9□□□□□ -1.14
EPHA4-206ENST00000424339 PPP6R2O75170 966 aa7.9□□□□□ -1.14
EPHA4-206ENST00000424339 KCNA2P16389 499 aa7.9□□□□□ -1.14
EPHA4-206ENST00000424339 ATP2B1P20020 1258 aa7.9□□□□□ -1.14
EPHA4-206ENST00000424339 UBA1P22314 1058 aaKnown RBP7.9□□□□□ -1.14
EPHA4-206ENST00000424339 CST5P28325 142 aaPredicted RBP7.9□□□□□ -1.14
EPHA4-206ENST00000424339 MCM4P33991 863 aa7.9□□□□□ -1.14
EPHA4-206ENST00000424339 CPT1AP50416 773 aa7.9□□□□□ -1.14
EPHA4-206ENST00000424339 JAK3P52333 1124 aa7.9□□□□□ -1.14
EPHA4-206ENST00000424339 PPP2R5CQ13362 524 aa7.9□□□□□ -1.14
EPHA4-206ENST00000424339 PKP1Q13835 747 aa7.9□□□□□ -1.14
EPHA4-206ENST00000424339 PDIA5Q14554 519 aa7.9□□□□□ -1.14
EPHA4-206ENST00000424339 SLC39A14Q15043 492 aa7.9□□□□□ -1.14
EPHA4-206ENST00000424339 CELF3Q5SZQ8 465 aaKnown RBP7.9□□□□□ -1.14
EPHA4-206ENST00000424339 LCE3BQ5TA77 95 aa7.9□□□□□ -1.14
EPHA4-206ENST00000424339 LRCH2Q5VUJ6 765 aa7.9□□□□□ -1.14
EPHA4-206ENST00000424339 DTHD1Q6ZMT9 781 aa7.9□□□□□ -1.14
EPHA4-206ENST00000424339 EEPD1Q7L9B9 569 aa7.9□□□□□ -1.14
EPHA4-206ENST00000424339 TLK2Q86UE8 772 aa7.9□□□□□ -1.14
EPHA4-206ENST00000424339 DHX37Q8IY37 1157 aaKnown RBP7.9□□□□□ -1.14
EPHA4-206ENST00000424339 ARRDC4Q8NCT1 418 aa7.9□□□□□ -1.14
EPHA4-206ENST00000424339 PPTC7Q8NI37 304 aa7.9□□□□□ -1.14
EPHA4-206ENST00000424339 NEK9Q8TD19 979 aa7.9□□□□□ -1.14
EPHA4-206ENST00000424339 TNPO1Q92973 898 aaKnown RBP7.9□□□□□ -1.14
EPHA4-206ENST00000424339 ZNF333Q96JL9 665 aa7.9□□□□□ -1.14
EPHA4-206ENST00000424339 MTMR9Q96QG7 549 aa7.9□□□□□ -1.14
EPHA4-206ENST00000424339 TEKT3Q9BXF9 490 aa7.9□□□□□ -1.14
EPHA4-206ENST00000424339 XRN2Q9H0D6 950 aaKnown RBP eCLIP7.9□□□□□ -1.14
EPHA4-206ENST00000424339 AP5M1Q9H0R1 490 aa7.9□□□□□ -1.14
EPHA4-206ENST00000424339 UPF3AQ9H1J1 476 aaKnown RBP7.9□□□□□ -1.14
EPHA4-206ENST00000424339 MLXIPQ9HAP2 919 aa7.9□□□□□ -1.14
EPHA4-206ENST00000424339 JPH1Q9HDC5 661 aaPredicted RBP7.9□□□□□ -1.14
EPHA4-206ENST00000424339 PAK6Q9NQU5 681 aaPredicted RBP7.9□□□□□ -1.14
EPHA4-206ENST00000424339 SLC9A2Q9UBY0 812 aa7.9□□□□□ -1.14
EPHA4-206ENST00000424339 GNEQ9Y223 722 aaKnown RBP7.9□□□□□ -1.14
EPHA4-206ENST00000424339 ZDHHC9Q9Y397 364 aa7.9□□□□□ -1.14
EPHA4-206ENST00000424339 PCDHB6Q9Y5E3 794 aa7.9□□□□□ -1.14
EPHA4-206ENST00000424339 ELP1O95163 1332 aa7.89□□□□□ -1.15
EPHA4-206ENST00000424339 WDR64B1ANS9 1081 aa7.89□□□□□ -1.15
EPHA4-206ENST00000424339 SLC37A4O43826 429 aa7.89□□□□□ -1.15
EPHA4-206ENST00000424339 EDIL3O43854 480 aa7.89□□□□□ -1.15
EPHA4-206ENST00000424339 PPFIA4O75335 1185 aa7.89□□□□□ -1.15
EPHA4-206ENST00000424339 PSMD10O75832 226 aa7.89□□□□□ -1.15
EPHA4-206ENST00000424339 FARP2O94887 1054 aaPredicted RBP7.89□□□□□ -1.15
EPHA4-206ENST00000424339 GGPS1O95749 300 aa7.89□□□□□ -1.15
EPHA4-206ENST00000424339 GJB1P08034 283 aa7.89□□□□□ -1.15
EPHA4-206ENST00000424339 ARP10275 920 aa7.89□□□□□ -1.15
EPHA4-206ENST00000424339 HOXD8P13378 290 aaPredicted RBP7.89□□□□□ -1.15
EPHA4-206ENST00000424339 MUTP22033 750 aa7.89□□□□□ -1.15
EPHA4-206ENST00000424339 ITGB7P26010 798 aa7.89□□□□□ -1.15
EPHA4-206ENST00000424339 CNGA1P29973 690 aa7.89□□□□□ -1.15
EPHA4-206ENST00000424339 LONP1P36776 959 aaKnown RBP7.89□□□□□ -1.15
EPHA4-206ENST00000424339 ADCYAP1R1P41586 468 aa7.89□□□□□ -1.15
EPHA4-206ENST00000424339 SLC26A2P50443 739 aa7.89□□□□□ -1.15
EPHA4-206ENST00000424339 GJA9P57773 515 aa7.89□□□□□ -1.15
EPHA4-206ENST00000424339 SEMA3FQ13275 785 aa7.89□□□□□ -1.15
EPHA4-206ENST00000424339 STK38Q15208 465 aa7.89□□□□□ -1.15
EPHA4-206ENST00000424339 SF3A1Q15459 793 aaKnown RBP7.89□□□□□ -1.15
EPHA4-206ENST00000424339 ZNF174Q15697 407 aa7.89□□□□□ -1.15
EPHA4-206ENST00000424339 HAUS3Q68CZ6 603 aa7.89□□□□□ -1.15
EPHA4-206ENST00000424339 CLEC17AQ6ZS10 378 aa7.89□□□□□ -1.15
EPHA4-206ENST00000424339 TAS1R3Q7RTX0 852 aa7.89□□□□□ -1.15
EPHA4-206ENST00000424339 RNF180Q86T96 592 aa7.89□□□□□ -1.15
EPHA4-206ENST00000424339 PCSK9Q8NBP7 692 aaKnown RBP7.89□□□□□ -1.15
EPHA4-206ENST00000424339 LINC00301Q8NCQ3 95 aa7.89□□□□□ -1.15
EPHA4-206ENST00000424339 ERMNQ8TAM6 284 aa7.89□□□□□ -1.15
EPHA4-206ENST00000424339 CYP2W1Q8TAV3 490 aa7.89□□□□□ -1.15
EPHA4-206ENST00000424339 SEPT1Q8WYJ6 367 aa7.89□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 77.8 ms