RNA–Protein interactions for RNA: ENST00000407343.3

PTPN12-202, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

TSL 3

Gene PTPN12, Length 704 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-202ENST00000407343 ZNF28P17035 718 aa8.54□□□□□ -1.04
PTPN12-202ENST00000407343 NEK2P51955 445 aa8.54□□□□□ -1.04
PTPN12-202ENST00000407343 FSCN1Q16658 493 aaKnown RBP8.54□□□□□ -1.04
PTPN12-202ENST00000407343 PITRM1Q5JRX3 1037 aa8.54□□□□□ -1.04
PTPN12-202ENST00000407343 PRAMEF9Q5VWM5 478 aa8.54□□□□□ -1.04
PTPN12-202ENST00000407343 BHLHE22Q8NFJ8 381 aaPredicted RBP8.54□□□□□ -1.04
PTPN12-202ENST00000407343 DACT3Q96B18 629 aaPredicted RBP8.54□□□□□ -1.04
PTPN12-202ENST00000407343 ACAP3Q96P50 834 aa8.54□□□□□ -1.04
PTPN12-202ENST00000407343 CCM2LQ9NUG4 571 aaPredicted RBP8.54□□□□□ -1.04
PTPN12-202ENST00000407343 GOLGA8AA7E2F4 631 aa8.53□□□□□ -1.04
PTPN12-202ENST00000407343 GOLGA8BA8MQT2 603 aa8.53□□□□□ -1.04
PTPN12-202ENST00000407343 PCDHGA12O60330 932 aa8.53□□□□□ -1.04
PTPN12-202ENST00000407343 MT-CO1P00395 513 aa8.53□□□□□ -1.04
PTPN12-202ENST00000407343 CELA3BP08861 270 aa8.53□□□□□ -1.04
PTPN12-202ENST00000407343 ENPP1P22413 925 aa8.53□□□□□ -1.04
PTPN12-202ENST00000407343 CD83Q01151 205 aa8.53□□□□□ -1.04
PTPN12-202ENST00000407343 ADCY2Q08462 1091 aa8.53□□□□□ -1.04
PTPN12-202ENST00000407343 TRIM25Q14258 630 aaKnown RBP8.53□□□□□ -1.04
PTPN12-202ENST00000407343 CT83Q5H943 113 aa8.53□□□□□ -1.04
PTPN12-202ENST00000407343 ODR4Q5SWX8 454 aa8.53□□□□□ -1.04
PTPN12-202ENST00000407343 CNKSR3Q6P9H4 555 aa8.53□□□□□ -1.04
PTPN12-202ENST00000407343 KCNK18Q7Z418 384 aa8.53□□□□□ -1.04
PTPN12-202ENST00000407343 CALML6Q8TD86 181 aa8.53□□□□□ -1.04
PTPN12-202ENST00000407343 ZNF526Q8TF50 670 aaPredicted RBP8.53□□□□□ -1.04
PTPN12-202ENST00000407343 TGFBRAP1Q8WUH2 860 aa8.53□□□□□ -1.04
PTPN12-202ENST00000407343 FUBP3Q96I24 572 aaKnown RBP eCLIP8.53□□□□□ -1.04
PTPN12-202ENST00000407343 CROTQ9UKG9 612 aa8.53□□□□□ -1.04
PTPN12-202ENST00000407343 KCTD3Q9Y597 815 aa8.53□□□□□ -1.04
PTPN12-202ENST00000407343 PCDHGA9Q9Y5G4 932 aaKnown RBP8.53□□□□□ -1.04
PTPN12-202ENST00000407343 PCDHGA8Q9Y5G5 932 aa8.53□□□□□ -1.04
PTPN12-202ENST00000407343 PCDHGA7Q9Y5G6 932 aa8.53□□□□□ -1.04
PTPN12-202ENST00000407343 PCDHGA6Q9Y5G7 932 aa8.53□□□□□ -1.04
PTPN12-202ENST00000407343 PCDHGA3Q9Y5H0 932 aa8.53□□□□□ -1.04
PTPN12-202ENST00000407343 PCDHGA2Q9Y5H1 932 aa8.53□□□□□ -1.04
PTPN12-202ENST00000407343 FFAR3O14843 346 aa8.52□□□□□ -1.05
PTPN12-202ENST00000407343 KLHL18O94889 574 aa8.52□□□□□ -1.05
PTPN12-202ENST00000407343 S100BP04271 92 aaPredicted RBP8.52□□□□□ -1.05
PTPN12-202ENST00000407343 CHGBP05060 677 aa8.52□□□□□ -1.05
PTPN12-202ENST00000407343 RBP3P10745 1247 aa8.52□□□□□ -1.05
PTPN12-202ENST00000407343 APEX1P27695 318 aaKnown RBP8.52□□□□□ -1.05
PTPN12-202ENST00000407343 PCBP2Q15366 365 aaKnown RBP eCLIP8.52□□□□□ -1.05
PTPN12-202ENST00000407343 CXXC5Q7LFL8 322 aaKnown RBP8.52□□□□□ -1.05
PTPN12-202ENST00000407343 PWWP2AQ96N64 755 aa8.52□□□□□ -1.05
PTPN12-202ENST00000407343 WRNIP1Q96S55 665 aa8.52□□□□□ -1.05
PTPN12-202ENST00000407343 PPP1R16BQ96T49 567 aa8.52□□□□□ -1.05
PTPN12-202ENST00000407343 SH3D21A4FU49 640 aa8.51□□□□□ -1.05
PTPN12-202ENST00000407343 RPL13P26373 211 aaKnown RBP8.51□□□□□ -1.05
PTPN12-202ENST00000407343 LINC00310P59036 64 aa8.51□□□□□ -1.05
PTPN12-202ENST00000407343 KRT85P78386 507 aa8.51□□□□□ -1.05
PTPN12-202ENST00000407343 TMEM200BQ69YZ2 307 aa8.51□□□□□ -1.05
PTPN12-202ENST00000407343 TIGD7Q6NT04 549 aaPredicted RBP8.51□□□□□ -1.05
PTPN12-202ENST00000407343 EAF2Q96CJ1 260 aaPredicted RBP8.51□□□□□ -1.05
PTPN12-202ENST00000407343 FAXDC2Q96IV6 333 aa8.51□□□□□ -1.05
PTPN12-202ENST00000407343 SLC13A1Q9BZW2 595 aa8.51□□□□□ -1.05
PTPN12-202ENST00000407343 WNT8AQ9H1J5 351 aa8.51□□□□□ -1.05
PTPN12-202ENST00000407343 MTG2Q9H4K7 406 aa8.51□□□□□ -1.05
PTPN12-202ENST00000407343 CNOT6Q9ULM6 557 aaKnown RBP8.51□□□□□ -1.05
PTPN12-202ENST00000407343 NUMBLQ9Y6R0 609 aa8.51□□□□□ -1.05
PTPN12-202ENST00000407343 WASHC2AQ641Q2 1341 aa8.51□□□□□ -1.05
PTPN12-202ENST00000407343 A0A0A6YYJ9 748 aa8.5□□□□□ -1.05
PTPN12-202ENST00000407343 SHTN1A0MZ66 631 aa8.5□□□□□ -1.05
PTPN12-202ENST00000407343 TCAF2A6NFQ2 919 aa8.5□□□□□ -1.05
PTPN12-202ENST00000407343 OPHN1O60890 802 aa8.5□□□□□ -1.05
PTPN12-202ENST00000407343 APOL3O95236 402 aa8.5□□□□□ -1.05
PTPN12-202ENST00000407343 MTNR1BP49286 362 aa8.5□□□□□ -1.05
PTPN12-202ENST00000407343 ANTXR2P58335 489 aa8.5□□□□□ -1.05
PTPN12-202ENST00000407343 CCDC62Q6P9F0 684 aa8.5□□□□□ -1.05
PTPN12-202ENST00000407343 TP53I13Q8NBR0 393 aaPredicted RBP8.5□□□□□ -1.05
PTPN12-202ENST00000407343 CHMP4CQ96CF2 233 aa8.5□□□□□ -1.05
PTPN12-202ENST00000407343 CEP89Q96ST8 783 aa8.5□□□□□ -1.05
PTPN12-202ENST00000407343 SPEF1Q9Y4P9 236 aa8.5□□□□□ -1.05
PTPN12-202ENST00000407343 MYPNQ86TC9 1320 aa8.5□□□□□ -1.05
PTPN12-202ENST00000407343 A0A0A6YYK5 440 aaPredicted RBP8.49□□□□□ -1.05
PTPN12-202ENST00000407343 LPLP06858 475 aa8.49□□□□□ -1.05
PTPN12-202ENST00000407343 MYBL2P10244 700 aa8.49□□□□□ -1.05
PTPN12-202ENST00000407343 IL13P35225 146 aa8.49□□□□□ -1.05
PTPN12-202ENST00000407343 BCAR1P56945 870 aa8.49□□□□□ -1.05
PTPN12-202ENST00000407343 NFATC3Q12968 1075 aa8.49□□□□□ -1.05
PTPN12-202ENST00000407343 KCNA10Q16322 511 aa8.49□□□□□ -1.05
PTPN12-202ENST00000407343 ADGRG2Q8IZP9 1017 aa8.49□□□□□ -1.05
PTPN12-202ENST00000407343 NUDT10Q8NFP7 164 aa8.49□□□□□ -1.05
PTPN12-202ENST00000407343 OR5AN1Q8NGI8 311 aa8.49□□□□□ -1.05
PTPN12-202ENST00000407343 FERMT2Q96AC1 680 aa8.49□□□□□ -1.05
PTPN12-202ENST00000407343 NUDT11Q96G61 164 aa8.49□□□□□ -1.05
PTPN12-202ENST00000407343 SOX7Q9BT81 388 aa8.49□□□□□ -1.05
PTPN12-202ENST00000407343 KCTD10Q9H3F6 313 aa8.49□□□□□ -1.05
PTPN12-202ENST00000407343 METTL14Q9HCE5 456 aaKnown RBP8.49□□□□□ -1.05
PTPN12-202ENST00000407343 ZNF277Q9NRM2 450 aaPredicted RBP8.49□□□□□ -1.05
PTPN12-202ENST00000407343 G3BP2Q9UN86 482 aaKnown RBP8.49□□□□□ -1.05
PTPN12-202ENST00000407343 PAX4O43316 350 aa8.48□□□□□ -1.05
PTPN12-202ENST00000407343 EPHB1P54762 984 aa8.48□□□□□ -1.05
PTPN12-202ENST00000407343 SRSF2Q01130 221 aaKnown RBP8.48□□□□□ -1.05
PTPN12-202ENST00000407343 TOP3AQ13472 1001 aaPredicted RBP8.48□□□□□ -1.05
PTPN12-202ENST00000407343 ODF1Q14990 250 aa8.48□□□□□ -1.05
PTPN12-202ENST00000407343 PTPN21Q16825 1174 aa8.48□□□□□ -1.05
PTPN12-202ENST00000407343 CPEB4Q17RY0 729 aaKnown RBP eCLIP8.48□□□□□ -1.05
PTPN12-202ENST00000407343 DPP8Q6V1X1 898 aaPredicted RBP8.48□□□□□ -1.05
PTPN12-202ENST00000407343 TSPEARQ8WU66 669 aa8.48□□□□□ -1.05
PTPN12-202ENST00000407343 JDP2Q8WYK2 163 aa8.48□□□□□ -1.05
PTPN12-202ENST00000407343 YTHDC1Q96MU7 727 aaKnown RBP8.48□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms