RNA–Protein interactions for RNA: snR38

snR38, Transcript of C/D box small nucleolar RNA (snoRNA), yeastyeast

Gene snR38, Length 95 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR38snR38 CDC7P06243 507 aa-0.97□□□□□ -2.56
snR38snR38 SKI2P35207 1287 aaKnown RBP RIP-Chip data-0.97□□□□□ -2.56not detected
snR38snR38 EFM1P38732 585 aa-0.97□□□□□ -2.56
snR38snR38 PHO86P46956 311 aa-0.97□□□□□ -2.56
snR38snR38 PMT5P52867 743 aa-0.97□□□□□ -2.56
snR38snR38 DIB1Q06819 143 aaPredicted RBP-0.97□□□□□ -2.56
snR38snR38 MSS18P08593 268 aa-0.98□□□□□ -2.57
snR38snR38 URA4P20051 364 aa-0.98□□□□□ -2.57
snR38snR38 IDH2P28241 369 aaKnown RBP-0.98□□□□□ -2.57
snR38snR38 RAD14P28519 371 aa-0.98□□□□□ -2.57
snR38snR38 YHR045WP38775 560 aa-0.98□□□□□ -2.57
snR38snR38 HIS6P40545 261 aa-0.98□□□□□ -2.57
snR38snR38 SAS2P40963 338 aa-0.98□□□□□ -2.57
snR38snR38 MIC19P43594 170 aa-0.98□□□□□ -2.57
snR38snR38 YJR011CP47086 261 aaPredicted RBP-0.98□□□□□ -2.57
snR38snR38 CAX4P53223 239 aa-0.98□□□□□ -2.57
snR38snR38 UBX4P54730 416 aa-0.98□□□□□ -2.57
snR38snR38 GIR2Q03768 265 aaPredicted RBP-0.98□□□□□ -2.57
snR38snR38 GAS2Q06135 555 aa-0.98□□□□□ -2.57
snR38snR38 NCA2Q12374 616 aa-0.98□□□□□ -2.57
snR38snR38 SPO23P33757 523 aa-0.99□□□□□ -2.57
snR38snR38 YBR220CP38318 560 aa-0.99□□□□□ -2.57
snR38snR38 ARC1P46672 376 aaKnown RBP-0.99□□□□□ -2.57
snR38snR38 YJR141WP47172 347 aaPredicted RBP-0.99□□□□□ -2.57
snR38snR38 ARC35P53731 342 aaKnown RBP-0.99□□□□□ -2.57
snR38snR38 TRM112P53738 135 aaPredicted RBP-0.99□□□□□ -2.57
snR38snR38 SLT2Q00772 484 aa-0.99□□□□□ -2.57
snR38snR38 SED1Q01589 338 aa-0.99□□□□□ -2.57
snR38snR38 TAF12Q03761 539 aa-0.99□□□□□ -2.57
snR38snR38 RAD30Q04049 632 aa-0.99□□□□□ -2.57
snR38snR38 TIM22Q12328 207 aa-0.99□□□□□ -2.57
snR38snR38 YDL007C-AQ2V2Q0 85 aa-0.99□□□□□ -2.57
snR38snR38 CPA1P07258 411 aaKnown RBP-1□□□□□ -2.57
snR38snR38 BGL2P15703 313 aaKnown RBP-1□□□□□ -2.57
snR38snR38 ROX1P25042 368 aa-1□□□□□ -2.57
snR38snR38 PMT1P33775 817 aa-1□□□□□ -2.57
snR38snR38 YBL029WP38201 376 aa-1□□□□□ -2.57
snR38snR38 GLE2P40066 365 aa-1□□□□□ -2.57
snR38snR38 KEG1P43614 200 aa-1□□□□□ -2.57
snR38snR38 TOS3P43637 560 aa-1□□□□□ -2.57
snR38snR38 YJR054WP47114 497 aa-1□□□□□ -2.57
snR38snR38 SDS23P53172 527 aa-1□□□□□ -2.57
snR38snR38 COS6P53344 381 aa-1□□□□□ -2.57
snR38snR38 MMT2Q08970 484 aa-1□□□□□ -2.57
snR38snR38 RIO1Q12196 484 aaKnown RBP-1□□□□□ -2.57
snR38snR38 ANP1P32629 500 aa-1.01□□□□□ -2.57
snR38snR38 CSE1P33307 960 aa-1.01□□□□□ -2.57
snR38snR38 VHC1P38329 1120 aa-1.01□□□□□ -2.57
snR38snR38 TCD1P38756 429 aa-1.01□□□□□ -2.57
snR38snR38 FPR3P38911 411 aaKnown RBP-1.01□□□□□ -2.57
snR38snR38 YAL037WP39728 267 aa-1.01□□□□□ -2.57
snR38snR38 CIS3P47001 227 aa-1.01□□□□□ -2.57
snR38snR38 YGR149WP48236 432 aa-1.01□□□□□ -2.57
snR38snR38 SLM2P53955 656 aa-1.01□□□□□ -2.57
snR38snR38 ECM19Q06011 112 aa-1.01□□□□□ -2.57
snR38snR38 BLS1Q06071 122 aa-1.01□□□□□ -2.57
snR38snR38 TFC6Q06339 672 aa-1.01□□□□□ -2.57
snR38snR38 ATP16Q12165 160 aa-1.01□□□□□ -2.57
snR38snR38 SPE4Q12455 300 aa-1.01□□□□□ -2.57
snR38snR38 POM152P39685 1337 aa-1.01□□□□□ -2.57
snR38snR38 SNF1P06782 633 aaKnown RBP-1.02□□□□□ -2.57
snR38snR38 SPS4P09937 338 aa-1.02□□□□□ -2.57
snR38snR38 YOL163WP0CF20 169 aa-1.02□□□□□ -2.57
snR38snR38 MSM1P22438 575 aa-1.02□□□□□ -2.57
snR38snR38 YOR062CP36025 268 aa-1.02□□□□□ -2.57
snR38snR38 IST2P38250 946 aa-1.02□□□□□ -2.57
snR38snR38 VTC2P43585 828 aa-1.02□□□□□ -2.57
snR38snR38 YJR146WP47174 117 aa-1.02□□□□□ -2.57
snR38snR38 LSG1P53145 640 aaKnown RBP-1.02□□□□□ -2.57
snR38snR38 YDR131CQ03899 556 aa-1.02□□□□□ -2.57
snR38snR38 RTN2Q12443 393 aa-1.02□□□□□ -2.57
snR38snR38 DFM1Q12743 341 aaKnown RBP-1.02□□□□□ -2.57
snR38snR38 SEC39Q12745 709 aa-1.02□□□□□ -2.57
snR38snR38 YBR056W-AI2HB52 66 aa-1.03□□□□□ -2.57
snR38snR38 GPH1P06738 902 aaKnown RBP-1.03□□□□□ -2.57
snR38snR38 SEC63P14906 663 aa-1.03□□□□□ -2.57
snR38snR38 ATG15P25641 520 aa-1.03□□□□□ -2.57
snR38snR38 KRE2P27809 442 aa-1.03□□□□□ -2.57
snR38snR38 RPB9P27999 122 aa-1.03□□□□□ -2.57
snR38snR38 COS1P53822 381 aa-1.03□□□□□ -2.57
snR38snR38 YEH1Q07804 573 aa-1.03□□□□□ -2.57
snR38snR38 TRM8Q12009 286 aa-1.03□□□□□ -2.57
snR38snR38 ATG34Q12292 412 aa-1.03□□□□□ -2.57
snR38snR38 SKM1Q12469 655 aa-1.03□□□□□ -2.57
snR38snR38 AFI1Q99222 893 aa-1.03□□□□□ -2.57
snR38snR38 YOL087CQ99247 1116 aa-1.03□□□□□ -2.57
snR38snR38 MEX67Q99257 599 aaKnown RBP-1.03□□□□□ -2.57
snR38snR38 YPT6Q99260 215 aa-1.03□□□□□ -2.57
snR38snR38 HEM4P06174 275 aa-1.04□□□□□ -2.58
snR38snR38 WBP1P33767 430 aaKnown RBP-1.04□□□□□ -2.58
snR38snR38 SOR1P35497 357 aaKnown RBP-1.04□□□□□ -2.58
snR38snR38 APE3P37302 537 aaKnown RBP-1.04□□□□□ -2.58
snR38snR38 GPI16P38875 610 aa-1.04□□□□□ -2.58
snR38snR38 YEL057CP39983 233 aa-1.04□□□□□ -2.58
snR38snR38 HEM14P40012 539 aa-1.04□□□□□ -2.58
snR38snR38 SIP4P46954 829 aa-1.04□□□□□ -2.58
snR38snR38 HIT1P46973 164 aa-1.04□□□□□ -2.58
snR38snR38 RRT6P53117 311 aaPredicted RBP-1.04□□□□□ -2.58
snR38snR38 RPA49Q01080 415 aaPredicted RBP-1.04□□□□□ -2.58
snR38snR38 CAB5Q03941 241 aa-1.04□□□□□ -2.58
Retrieved 100 of 5,963 RNA–protein pairs in 13.4 ms