RNA–Protein interactions for RNA: YPL003W

ULA1, Transcript of Protein that activates Rub1p (NEDD8) before neddylation, yeast

Gene ULA1, Length 1,389 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
ULA1	YPL003W	MED11	Q99278	115 aa		4.95	□□□□□ -1.62
ULA1	YPL003W	RHB1	P25378	209 aa		4.94	□□□□□ -1.62
ULA1	YPL003W	YIM1	P28625	365 aa		4.94	□□□□□ -1.62
ULA1	YPL003W	VMA6	P32366	345 aa	Known RBP	4.94	□□□□□ -1.62
ULA1	YPL003W	MSN2	P33748	704 aa		4.94	□□□□□ -1.62
ULA1	YPL003W	RCY1	P39531	840 aa		4.94	□□□□□ -1.62
ULA1	YPL003W	ISC1	P40015	477 aa	Known RBP	4.94	□□□□□ -1.62
ULA1	YPL003W	AVT6	P40074	448 aa		4.94	□□□□□ -1.62
ULA1	YPL003W	LTP1	P40347	161 aa		4.94	□□□□□ -1.62
ULA1	YPL003W	MET28	P40573	187 aa		4.94	□□□□□ -1.62
ULA1	YPL003W	DIC1	Q06143	298 aa		4.94	□□□□□ -1.62
ULA1	YPL003W	EMG1	Q06287	252 aa	Known RBP	4.94	□□□□□ -1.62
ULA1	YPL003W	GIC2	Q06648	383 aa		4.94	□□□□□ -1.62
ULA1	YPL003W	MRL1	Q06815	381 aa		4.94	□□□□□ -1.62
ULA1	YPL003W	YLR030W	Q07967	263 aa		4.94	□□□□□ -1.62
ULA1	YPL003W	DCI1	Q08558	271 aa		4.94	□□□□□ -1.62
ULA1	YPL003W	RTK1	Q12100	620 aa	Predicted RBP	4.94	□□□□□ -1.62
ULA1	YPL003W	BSC1	Q12140	328 aa		4.94	□□□□□ -1.62
ULA1	YPL003W	YLR126C	Q12288	251 aa		4.94	□□□□□ -1.62
ULA1	YPL003W	YOR019W	Q99248	730 aa		4.94	□□□□□ -1.62
ULA1	YPL003W	TFS1	P14306	219 aa		4.93	□□□□□ -1.62
ULA1	YPL003W	SNF5	P18480	905 aa		4.93	□□□□□ -1.62
ULA1	YPL003W	URE2	P23202	354 aa	Known RBP	4.93	□□□□□ -1.62
ULA1	YPL003W	GSH1	P32477	678 aa		4.93	□□□□□ -1.62
ULA1	YPL003W	ZUO1	P32527	433 aa	Known RBP	4.93	□□□□□ -1.62
ULA1	YPL003W	RPN2	P32565	945 aa	Known RBP	4.93	□□□□□ -1.62
ULA1	YPL003W	TUL1	P36096	758 aa		4.93	□□□□□ -1.62
ULA1	YPL003W	ECM4	P36156	370 aa		4.93	□□□□□ -1.62
ULA1	YPL003W	IPT1	P38954	527 aa		4.93	□□□□□ -1.62
ULA1	YPL003W	SOP4	P39543	234 aa	Predicted RBP	4.93	□□□□□ -1.62
ULA1	YPL003W	AST2	P39945	430 aa	Known RBP	4.93	□□□□□ -1.62
ULA1	YPL003W	KRE29	P40026	464 aa		4.93	□□□□□ -1.62
ULA1	YPL003W	PRE6	P40303	254 aa	Known RBP	4.93	□□□□□ -1.62
ULA1	YPL003W	YIL165C	P40446	119 aa		4.93	□□□□□ -1.62
ULA1	YPL003W	YFL066C	P43538	392 aa		4.93	□□□□□ -1.62
ULA1	YPL003W	HOS2	P53096	452 aa	Predicted RBP	4.93	□□□□□ -1.62
ULA1	YPL003W	CDH1	P53197	566 aa		4.93	□□□□□ -1.62
ULA1	YPL003W	YGR012W	P53206	393 aa		4.93	□□□□□ -1.62
ULA1	YPL003W	TPS1	Q00764	495 aa	Known RBP	4.93	□□□□□ -1.62
ULA1	YPL003W	YSA1	Q01976	231 aa		4.93	□□□□□ -1.62
ULA1	YPL003W	SRL4	Q03085	281 aa		4.93	□□□□□ -1.62
ULA1	YPL003W	ARP10	Q04549	284 aa		4.93	□□□□□ -1.62
ULA1	YPL003W	RNH202	Q05635	350 aa		4.93	□□□□□ -1.62
ULA1	YPL003W	STP3	Q05937	343 aa		4.93	□□□□□ -1.62
ULA1	YPL003W	YPR172W	Q06608	200 aa		4.93	□□□□□ -1.62
ULA1	YPL003W	NFI1	Q12216	726 aa		4.93	□□□□□ -1.62
ULA1	YPL003W	TRM10	Q12400	293 aa		4.93	□□□□□ -1.62
ULA1	YPL003W	YPL119C-A	Q3E751	87 aa		4.93	□□□□□ -1.62
ULA1	YPL003W	VCX1	Q99385	411 aa		4.93	□□□□□ -1.62
ULA1	YPL003W	MET17	P06106	444 aa		4.92	□□□□□ -1.62
ULA1	YPL003W	YOL163W	P0CF20	169 aa		4.92	□□□□□ -1.62
ULA1	YPL003W	RPL1A	P0CX43	217 aa	Known RBP	4.92	□□□□□ -1.62
ULA1	YPL003W	RPL1B	P0CX44	217 aa	Known RBP	4.92	□□□□□ -1.62
ULA1	YPL003W	THR1	P17423	357 aa	Known RBP	4.92	□□□□□ -1.62
ULA1	YPL003W	AAC3	P18238	307 aa		4.92	□□□□□ -1.62
ULA1	YPL003W	APN1	P22936	367 aa		4.92	□□□□□ -1.62
ULA1	YPL003W	BUD5	P25300	642 aa	Predicted RBP	4.92	□□□□□ -1.62
ULA1	YPL003W	CHA1	P25379	360 aa	Known RBP	4.92	□□□□□ -1.62
ULA1	YPL003W	IMG1	P25626	169 aa		4.92	□□□□□ -1.62
ULA1	YPL003W	CWP1	P28319	239 aa		4.92	□□□□□ -1.62
ULA1	YPL003W	THI4	P32318	326 aa		4.92	□□□□□ -1.62
ULA1	YPL003W	HIR2	P32480	875 aa		4.92	□□□□□ -1.62
ULA1	YPL003W	YOR062C	P36025	268 aa		4.92	□□□□□ -1.62
ULA1	YPL003W	CTF8	P38877	133 aa		4.92	□□□□□ -1.62
ULA1	YPL003W	SOK1	P40317	901 aa		4.92	□□□□□ -1.62
ULA1	YPL003W	TED1	P40533	473 aa		4.92	□□□□□ -1.62
ULA1	YPL003W	SWP82	P43554	623 aa		4.92	□□□□□ -1.62
ULA1	YPL003W	IRC5	P43610	853 aa		4.92	□□□□□ -1.62
ULA1	YPL003W	NUP57	P48837	541 aa		4.92	□□□□□ -1.62
ULA1	YPL003W	SNF12	P53628	566 aa		4.92	□□□□□ -1.62
ULA1	YPL003W	MTQ1	P53944	314 aa		4.92	□□□□□ -1.62
ULA1	YPL003W	SIZ1	Q04195	904 aa		4.92	□□□□□ -1.62
ULA1	YPL003W	NAT4	Q04751	285 aa		4.92	□□□□□ -1.62
ULA1	YPL003W	PST2	Q12335	198 aa	Known RBP	4.92	□□□□□ -1.62
ULA1	YPL003W	RKM5	Q12367	367 aa		4.92	□□□□□ -1.62
ULA1	YPL003W	POL2	P21951	2222 aa	Known RBP	4.92	□□□□□ -1.62
ULA1	YPL003W	CBS1	P14066	229 aa		4.91	□□□□□ -1.62
ULA1	YPL003W	DPB2	P24482	689 aa	Predicted RBP	4.91	□□□□□ -1.62
ULA1	YPL003W	NRP1	P32770	719 aa	Known RBP RIP-Chip data	4.91	□□□□□ -1.62	not detected
ULA1	YPL003W	UTP11	P34247	250 aa	Predicted RBP	4.91	□□□□□ -1.62
ULA1	YPL003W	YKL069W	P36088	180 aa		4.91	□□□□□ -1.62
ULA1	YPL003W	VPS51	P36116	164 aa		4.91	□□□□□ -1.62
ULA1	YPL003W	BET3	P36149	193 aa		4.91	□□□□□ -1.62
ULA1	YPL003W	YBR184W	P38299	523 aa		4.91	□□□□□ -1.62
ULA1	YPL003W	TRR2	P38816	342 aa		4.91	□□□□□ -1.62
ULA1	YPL003W	RET2	P43621	546 aa		4.91	□□□□□ -1.62
ULA1	YPL003W	SKP1	P52286	194 aa		4.91	□□□□□ -1.62
ULA1	YPL003W	MPC1	P53157	130 aa	Known RBP	4.91	□□□□□ -1.62
ULA1	YPL003W	PRP3	Q03338	469 aa	Predicted RBP	4.91	□□□□□ -1.62
ULA1	YPL003W	YMD8	Q03697	442 aa		4.91	□□□□□ -1.62
ULA1	YPL003W	SMA2	Q04658	369 aa		4.91	□□□□□ -1.62
ULA1	YPL003W	RSA3	Q05942	220 aa	Known RBP	4.91	□□□□□ -1.62
ULA1	YPL003W	YLR345W	Q06137	509 aa		4.91	□□□□□ -1.62
ULA1	YPL003W	VPS36	Q06696	566 aa		4.91	□□□□□ -1.62
ULA1	YPL003W	YPR091C	Q06833	770 aa		4.91	□□□□□ -1.62
ULA1	YPL003W	HER1	Q12276	1246 aa		4.91	□□□□□ -1.62
ULA1	YPL003W	YOR214C	Q12282	236 aa		4.91	□□□□□ -1.62
ULA1	YPL003W	TY1A-DR3	Q12441	440 aa		4.91	□□□□□ -1.62
ULA1	YPL003W	SKM1	Q12469	655 aa		4.91	□□□□□ -1.62
ULA1	YPL003W	RPP1A	P05318	106 aa	Predicted RBP	4.91	□□□□□ -1.62

Retrieved 100 of 5,963 RNA–protein pairs in 16.3 ms