RNA–Protein interactions for RNA: YOR036W

PEP12, Transcript of Target membrane receptor (t-SNARE), yeastyeast

Gene PEP12, Length 867 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PEP12YOR036W ARP5P53946 755 aa2.31□□□□□ -2.04
PEP12YOR036W ABZ2Q03266 374 aa2.31□□□□□ -2.04
PEP12YOR036W HER2Q03557 464 aa2.31□□□□□ -2.04
PEP12YOR036W MSS116P15424 664 aaKnown RBP2.3□□□□□ -2.04
PEP12YOR036W CKI1P20485 582 aa2.3□□□□□ -2.04
PEP12YOR036W FAR1P21268 830 aa2.3□□□□□ -2.04
PEP12YOR036W ZUO1P32527 433 aaKnown RBP2.3□□□□□ -2.04
PEP12YOR036W MRPS5P33759 307 aa2.3□□□□□ -2.04
PEP12YOR036W TIR2P33890 251 aa2.3□□□□□ -2.04
PEP12YOR036W MRPL40P36534 297 aa2.3□□□□□ -2.04
PEP12YOR036W GEP4P38812 185 aa2.3□□□□□ -2.04
PEP12YOR036W MNN9P39107 395 aaKnown RBP2.3□□□□□ -2.04
PEP12YOR036W PRP39P39682 629 aaKnown RBP2.3□□□□□ -2.04
PEP12YOR036W REE1P40893 198 aa2.3□□□□□ -2.04
PEP12YOR036W MRM2P53123 320 aa2.3□□□□□ -2.04
PEP12YOR036W YGL114WP53134 725 aa2.3□□□□□ -2.04
PEP12YOR036W YNL146WP53906 100 aa2.3□□□□□ -2.04
PEP12YOR036W PRM6Q04705 352 aa2.3□□□□□ -2.04
PEP12YOR036W CUR1Q06469 252 aa2.3□□□□□ -2.04
PEP12YOR036W LOT6Q07923 191 aa2.3□□□□□ -2.04
PEP12YOR036W YDR262WQ12331 272 aa2.3□□□□□ -2.04
PEP12YOR036W MEX67Q99257 599 aaKnown RBP2.3□□□□□ -2.04
PEP12YOR036W YOR338WQ99326 363 aa2.3□□□□□ -2.04
PEP12YOR036W VPS63O13549 108 aa2.29□□□□□ -2.04
PEP12YOR036W SPT15P13393 240 aaKnown RBP2.29□□□□□ -2.04
PEP12YOR036W ARO2P28777 376 aaKnown RBP2.29□□□□□ -2.04
PEP12YOR036W SSE1P32589 693 aaKnown RBP2.29□□□□□ -2.04
PEP12YOR036W RAD5P32849 1169 aaPredicted RBP2.29□□□□□ -2.04
PEP12YOR036W MNS1P32906 549 aa2.29□□□□□ -2.04
PEP12YOR036W EBP2P36049 427 aaKnown RBP2.29□□□□□ -2.04
PEP12YOR036W RFS1P38234 210 aaKnown RBP2.29□□□□□ -2.04
PEP12YOR036W YHK8P38776 514 aa2.29□□□□□ -2.04
PEP12YOR036W AIM20P40451 204 aa2.29□□□□□ -2.04
PEP12YOR036W YIL029CP40538 142 aa2.29□□□□□ -2.04
PEP12YOR036W SEC27P41811 889 aaKnown RBP2.29□□□□□ -2.04
PEP12YOR036W WWM1P43582 211 aaKnown RBP2.29□□□□□ -2.04
PEP12YOR036W YPI1P43587 155 aa2.29□□□□□ -2.04
PEP12YOR036W MPP10P47083 593 aaKnown RBP2.29□□□□□ -2.04
PEP12YOR036W TRM112P53738 135 aaPredicted RBP2.29□□□□□ -2.04
PEP12YOR036W APJ1P53940 528 aa2.29□□□□□ -2.04
PEP12YOR036W YMR102CQ03177 834 aa2.29□□□□□ -2.04
PEP12YOR036W SMP3Q04174 516 aa2.29□□□□□ -2.04
PEP12YOR036W PBA1Q05778 276 aa2.29□□□□□ -2.04
PEP12YOR036W ARR1Q06596 294 aa2.29□□□□□ -2.04
PEP12YOR036W TSR1Q07381 788 aaKnown RBP2.29□□□□□ -2.04
PEP12YOR036W YDL114WQ07530 308 aa2.29□□□□□ -2.04
PEP12YOR036W SHS1Q07657 551 aa2.29□□□□□ -2.04
PEP12YOR036W GAT3Q07928 141 aa2.29□□□□□ -2.04
PEP12YOR036W FDH1Q08911 376 aa2.29□□□□□ -2.04
PEP12YOR036W GLE1Q12315 538 aa2.29□□□□□ -2.04
PEP12YOR036W YRM1Q12340 786 aa2.29□□□□□ -2.04
PEP12YOR036W AHC1Q12433 566 aa2.29□□□□□ -2.04
PEP12YOR036W SPO24Q3E752 67 aa2.29□□□□□ -2.04
PEP12YOR036W YCR024C-BQ3E7Z8 88 aa2.29□□□□□ -2.04
PEP12YOR036W HHF1P02309 103 aaKnown RBP2.28□□□□□ -2.04
PEP12YOR036W PIS1P06197 220 aaKnown RBP2.28□□□□□ -2.04
PEP12YOR036W RPS8AP0CX39 200 aaKnown RBP2.28□□□□□ -2.04
PEP12YOR036W RPS8BP0CX40 200 aaKnown RBP2.28□□□□□ -2.04
PEP12YOR036W MXR2P25566 168 aa2.28□□□□□ -2.04
PEP12YOR036W POP5P28005 173 aa2.28□□□□□ -2.04
PEP12YOR036W FUN26P31381 517 aa2.28□□□□□ -2.04
PEP12YOR036W IST2P38250 946 aa2.28□□□□□ -2.04
PEP12YOR036W SWC5P38326 303 aa2.28□□□□□ -2.04
PEP12YOR036W ATG7P38862 630 aa2.28□□□□□ -2.04
PEP12YOR036W CDC40P40968 455 aaPredicted RBP2.28□□□□□ -2.04
PEP12YOR036W YFR018CP43599 363 aa2.28□□□□□ -2.04
PEP12YOR036W LCB3P47013 409 aa2.28□□□□□ -2.04
PEP12YOR036W CWC25P53854 179 aaKnown RBP2.28□□□□□ -2.04
PEP12YOR036W MTQ1P53944 314 aa2.28□□□□□ -2.04
PEP12YOR036W NUP116Q02630 1113 aa2.28□□□□□ -2.04
PEP12YOR036W ELP3Q02908 557 aaKnown RBP2.28□□□□□ -2.04
PEP12YOR036W TDA1Q03533 586 aa2.28□□□□□ -2.04
PEP12YOR036W VTI1Q04338 217 aa2.28□□□□□ -2.04
PEP12YOR036W YLR297WQ05899 129 aa2.28□□□□□ -2.04
PEP12YOR036W SMC5Q08204 1093 aa2.28□□□□□ -2.04
PEP12YOR036W YOL075CQ08234 1294 aa2.28□□□□□ -2.04
PEP12YOR036W APC5Q08683 685 aa2.28□□□□□ -2.04
PEP12YOR036W YGK3Q12222 375 aaPredicted RBP2.28□□□□□ -2.04
PEP12YOR036W EAF3Q12432 401 aa2.28□□□□□ -2.04
PEP12YOR036W RGS2Q99188 309 aa2.28□□□□□ -2.04
PEP12YOR036W INO80P53115 1489 aa2.27□□□□□ -2.05
PEP12YOR036W SUP35P05453 685 aaKnown RBP2.27□□□□□ -2.05
PEP12YOR036W RPC40P07703 335 aaKnown RBP2.27□□□□□ -2.05
PEP12YOR036W YLL053CP0CD98 152 aa2.27□□□□□ -2.05
PEP12YOR036W ARF2P19146 181 aaKnown RBP2.27□□□□□ -2.05
PEP12YOR036W RPB5P20434 215 aa2.27□□□□□ -2.05
PEP12YOR036W UTR1P21373 530 aa2.27□□□□□ -2.05
PEP12YOR036W CIN8P27895 1000 aa2.27□□□□□ -2.05
PEP12YOR036W ERG9P29704 444 aa2.27□□□□□ -2.05
PEP12YOR036W SPO23P33757 523 aa2.27□□□□□ -2.05
PEP12YOR036W YBL059WP34224 193 aa2.27□□□□□ -2.05
PEP12YOR036W RTC2P38279 296 aa2.27□□□□□ -2.05
PEP12YOR036W YHR131CP38835 850 aa2.27□□□□□ -2.05
PEP12YOR036W PTH1P38876 190 aaKnown RBP2.27□□□□□ -2.05
PEP12YOR036W BTT1P40314 149 aaPredicted RBP2.27□□□□□ -2.05
PEP12YOR036W MAM33P40513 266 aa2.27□□□□□ -2.05
PEP12YOR036W KEG1P43614 200 aa2.27□□□□□ -2.05
PEP12YOR036W YJR085CP47131 105 aaKnown RBP2.27□□□□□ -2.05
PEP12YOR036W TRF5P48561 642 aaKnown RBP2.27□□□□□ -2.05
PEP12YOR036W RIB4P50861 169 aaPredicted RBP2.27□□□□□ -2.05
Retrieved 100 of 5,963 RNA–protein pairs in 29.5 ms