RNA–Protein interactions for RNA: YOL110W

SHR5, Transcript of Palmitoyltransferase subunit, yeast

Gene SHR5, Length 714 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SHR5	YOL110W	GID8	P40208	455 aa		13.36	□□□□□ -0.27
SHR5	YOL110W	YJR115W	P47152	169 aa		13.36	□□□□□ -0.27
SHR5	YOL110W	TOS2	P50078	622 aa		13.36	□□□□□ -0.27
SHR5	YOL110W	MAL11	P53048	616 aa		13.36	□□□□□ -0.27
SHR5	YOL110W	DBP6	P53734	629 aa	Known RBP	13.36	□□□□□ -0.27
SHR5	YOL110W	YMR099C	Q03161	297 aa	Known RBP	13.36	□□□□□ -0.27
SHR5	YOL110W	INP1	Q03694	420 aa		13.36	□□□□□ -0.27
SHR5	YOL110W	SIR3	P06701	978 aa		13.35	□□□□□ -0.27
SHR5	YOL110W	YOL163W	P0CF20	169 aa		13.35	□□□□□ -0.27
SHR5	YOL110W	PBN1	P25580	416 aa		13.35	□□□□□ -0.27
SHR5	YOL110W	STP22	P25604	385 aa		13.35	□□□□□ -0.27
SHR5	YOL110W	LHS1	P36016	881 aa		13.35	□□□□□ -0.27
SHR5	YOL110W	ANS1	P38832	159 aa		13.35	□□□□□ -0.27
SHR5	YOL110W	TAT2	P38967	592 aa		13.35	□□□□□ -0.27
SHR5	YOL110W	SMK1	P41808	388 aa		13.35	□□□□□ -0.27
SHR5	YOL110W	MEP3	P53390	489 aa		13.35	□□□□□ -0.27
SHR5	YOL110W	URC2	Q04411	772 aa		13.35	□□□□□ -0.27
SHR5	YOL110W	BDS1	Q08347	646 aa		13.35	□□□□□ -0.27
SHR5	YOL110W	YDL211C	Q12121	372 aa		13.35	□□□□□ -0.27
SHR5	YOL110W	TIF3	P34167	436 aa	Known RBP	13.34	□□□□□ -0.27
SHR5	YOL110W	YHR097C	P38809	366 aa	Known RBP	13.34	□□□□□ -0.27
SHR5	YOL110W	CTF8	P38877	133 aa		13.34	□□□□□ -0.27
SHR5	YOL110W	PRE6	P40303	254 aa	Known RBP	13.34	□□□□□ -0.27
SHR5	YOL110W	IMD4	P50094	524 aa	Known RBP	13.34	□□□□□ -0.27
SHR5	YOL110W	MON1	P53129	644 aa		13.34	□□□□□ -0.27
SHR5	YOL110W	LCL3	P53153	274 aa		13.34	□□□□□ -0.27
SHR5	YOL110W	COG5	P53951	403 aa		13.34	□□□□□ -0.27
SHR5	YOL110W	YDR541C	Q03049	344 aa		13.34	□□□□□ -0.27
SHR5	YOL110W	SMP3	Q04174	516 aa		13.34	□□□□□ -0.27
SHR5	YOL110W	ARV1	Q06541	321 aa		13.34	□□□□□ -0.27
SHR5	YOL110W	NKP1	Q12493	238 aa		13.34	□□□□□ -0.27
SHR5	YOL110W	AI1	P03875	834 aa		13.33	□□□□□ -0.28
SHR5	YOL110W	BUD5	P25300	642 aa	Predicted RBP	13.33	□□□□□ -0.28
SHR5	YOL110W	HBS1	P32769	611 aa	Known RBP	13.33	□□□□□ -0.28
SHR5	YOL110W	YLR460C	P54007	376 aa		13.33	□□□□□ -0.28
SHR5	YOL110W	PEX25	Q02969	394 aa		13.33	□□□□□ -0.28
SHR5	YOL110W	RPC40	P07703	335 aa	Known RBP	13.32	□□□□□ -0.28
SHR5	YOL110W	RIP1	P08067	215 aa		13.32	□□□□□ -0.28
SHR5	YOL110W	BAR1	P12630	587 aa		13.32	□□□□□ -0.28
SHR5	YOL110W	SAC7	P17121	654 aa		13.32	□□□□□ -0.28
SHR5	YOL110W	ITR2	P30606	609 aa		13.32	□□□□□ -0.28
SHR5	YOL110W	AHP1	P38013	176 aa	Known RBP	13.32	□□□□□ -0.28
SHR5	YOL110W	SEA4	P38164	1038 aa		13.32	□□□□□ -0.28
SHR5	YOL110W	TDA11	P38854	504 aa		13.32	□□□□□ -0.28
SHR5	YOL110W	LEM3	P42838	414 aa		13.32	□□□□□ -0.28
SHR5	YOL110W	SNO3	P43544	222 aa		13.32	□□□□□ -0.28
SHR5	YOL110W	MDV1	P47025	714 aa		13.32	□□□□□ -0.28
SHR5	YOL110W	YSA1	Q01976	231 aa		13.32	□□□□□ -0.28
SHR5	YOL110W	SPO19	Q03029	223 aa		13.32	□□□□□ -0.28
SHR5	YOL110W	KGD1	P20967	1014 aa	Known RBP	13.31	□□□□□ -0.28
SHR5	YOL110W	PRP21	P32524	280 aa	Predicted RBP	13.31	□□□□□ -0.28
SHR5	YOL110W	YHR219W	P38900	624 aa		13.31	□□□□□ -0.28
SHR5	YOL110W	YER158C	P40095	573 aa		13.31	□□□□□ -0.28
SHR5	YOL110W	BAP3	P41815	604 aa		13.31	□□□□□ -0.28
SHR5	YOL110W	CUP9	P41817	306 aa		13.31	□□□□□ -0.28
SHR5	YOL110W	GCN20	P43535	752 aa	Known RBP	13.31	□□□□□ -0.28
SHR5	YOL110W	NCE101	Q02820	53 aa		13.31	□□□□□ -0.28
SHR5	YOL110W	PRP46	Q12417	451 aa	Predicted RBP	13.31	□□□□□ -0.28
SHR5	YOL110W	TPK3	P05986	398 aa		13.3	□□□□□ -0.28
SHR5	YOL110W	HIR2	P32480	875 aa		13.3	□□□□□ -0.28
SHR5	YOL110W	ORC2	P32833	620 aa		13.3	□□□□□ -0.28
SHR5	YOL110W	ALG3	P38179	458 aa		13.3	□□□□□ -0.28
SHR5	YOL110W	YBR138C	P38277	524 aa		13.3	□□□□□ -0.28
SHR5	YOL110W	EGD2	P38879	174 aa	Known RBP	13.3	□□□□□ -0.28
SHR5	YOL110W	PAC1	P39946	494 aa	Known RBP	13.3	□□□□□ -0.28
SHR5	YOL110W	YIL067C	P40514	678 aa		13.3	□□□□□ -0.28
SHR5	YOL110W	MSS2	P40990	351 aa		13.3	□□□□□ -0.28
SHR5	YOL110W	SEH1	P53011	349 aa	Known RBP	13.3	□□□□□ -0.28
SHR5	YOL110W	YKR011C	Q02209	353 aa		13.3	□□□□□ -0.28
SHR5	YOL110W	SKI7	Q08491	747 aa	Predicted RBP	13.3	□□□□□ -0.28
SHR5	YOL110W	FRE7	Q12333	620 aa		13.3	□□□□□ -0.28
SHR5	YOL110W	PAR32	Q12515	295 aa	Known RBP	13.3	□□□□□ -0.28
SHR5	YOL110W	YPT1	P01123	206 aa	Known RBP	13.29	□□□□□ -0.28
SHR5	YOL110W	VPH2	P32341	215 aa		13.29	□□□□□ -0.28
SHR5	YOL110W	SEC61	P32915	480 aa		13.29	□□□□□ -0.28
SHR5	YOL110W	ARC19	P33204	171 aa	Known RBP	13.29	□□□□□ -0.28
SHR5	YOL110W	SSZ1	P38788	538 aa	Known RBP	13.29	□□□□□ -0.28
SHR5	YOL110W	ISC1	P40015	477 aa	Known RBP	13.29	□□□□□ -0.28
SHR5	YOL110W	SHR5	P41912	237 aa		13.29	□□□□□ -0.28
SHR5	YOL110W	BAT2	P47176	376 aa	Known RBP	13.29	□□□□□ -0.28
SHR5	YOL110W	MPA43	P53583	542 aa	Predicted RBP	13.29	□□□□□ -0.28
SHR5	YOL110W	SNF12	P53628	566 aa		13.29	□□□□□ -0.28
SHR5	YOL110W	RSN1	Q03516	953 aa		13.29	□□□□□ -0.28
SHR5	YOL110W	AKR2	Q12013	749 aa		13.29	□□□□□ -0.28
SHR5	YOL110W	TPO4	Q12256	659 aa		13.29	□□□□□ -0.28
SHR5	YOL110W	IRA1	P18963	3092 aa		13.29	□□□□□ -0.28
SHR5	YOL110W	TFS1	P14306	219 aa		13.28	□□□□□ -0.28
SHR5	YOL110W	PRP19	P32523	503 aa	Known RBP	13.28	□□□□□ -0.28
SHR5	YOL110W	SNU114	P36048	1008 aa	Known RBP	13.28	□□□□□ -0.28
SHR5	YOL110W	SBE22	P38814	852 aa		13.28	□□□□□ -0.28
SHR5	YOL110W	RRG9	P40156	214 aa		13.28	□□□□□ -0.28
SHR5	YOL110W	CIN1	P40987	1014 aa		13.28	□□□□□ -0.28
SHR5	YOL110W	TMA20	P89886	181 aa	Predicted RBP	13.28	□□□□□ -0.28
SHR5	YOL110W	ABZ2	Q03266	374 aa		13.28	□□□□□ -0.28
SHR5	YOL110W	ATG17	Q06410	417 aa		13.28	□□□□□ -0.28
SHR5	YOL110W	BRX1	Q08235	291 aa	Known RBP	13.28	□□□□□ -0.28
SHR5	YOL110W	YPL119C-A	Q3E751	87 aa		13.28	□□□□□ -0.28
SHR5	YOL110W	RPP2B	P02400	110 aa	Known RBP	13.27	□□□□□ -0.29
SHR5	YOL110W	SRO77	P38163	1010 aa		13.27	□□□□□ -0.29
SHR5	YOL110W	SOK1	P40317	901 aa		13.27	□□□□□ -0.29

Retrieved 100 of 5,963 RNA–protein pairs in 68.7 ms