RNA–Protein interactions for RNA: YMR304W

UBP15, Transcript of Ubiquitin-specific protease involved in protein deubiquitination, yeastyeast

Gene UBP15, Length 3,693 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBP15YMR304W RTT103Q05543 409 aa2.29□□□□□ -2.04
UBP15YMR304W CTF3Q12748 733 aa2.29□□□□□ -2.04
UBP15YMR304W AFI1Q99222 893 aa2.29□□□□□ -2.04
UBP15YMR304W ATR1P13090 542 aa2.29□□□□□ -2.04
UBP15YMR304W SGV1P23293 657 aaKnown RBP2.29□□□□□ -2.04
UBP15YMR304W PPH21P23594 369 aa2.29□□□□□ -2.04
UBP15YMR304W AGP1P25376 633 aa2.29□□□□□ -2.04
UBP15YMR304W RRT12P25381 491 aa2.29□□□□□ -2.04
UBP15YMR304W RPS5P26783 225 aaKnown RBP2.29□□□□□ -2.04
UBP15YMR304W MCM10P32354 571 aa2.29□□□□□ -2.04
UBP15YMR304W STE14P32584 239 aa2.29□□□□□ -2.04
UBP15YMR304W MDL1P33310 695 aa2.29□□□□□ -2.04
UBP15YMR304W YKL100CP34248 587 aa2.29□□□□□ -2.04
UBP15YMR304W TSA1P34760 196 aaKnown RBP2.29□□□□□ -2.04
UBP15YMR304W PTC1P35182 281 aa2.29□□□□□ -2.04
UBP15YMR304W OAF3P36023 863 aa2.29□□□□□ -2.04
UBP15YMR304W SRX1P36077 127 aa2.29□□□□□ -2.04
UBP15YMR304W DID4P36108 232 aa2.29□□□□□ -2.04
UBP15YMR304W FLR1P38124 548 aa2.29□□□□□ -2.04
UBP15YMR304W YPC1P38298 316 aa2.29□□□□□ -2.04
UBP15YMR304W VMA7P39111 118 aa2.29□□□□□ -2.04
UBP15YMR304W YEL020CP39994 560 aa2.29□□□□□ -2.04
UBP15YMR304W BTT1P40314 149 aaPredicted RBP2.29□□□□□ -2.04
UBP15YMR304W FMP32P43557 207 aa2.29□□□□□ -2.04
UBP15YMR304W BOR1P53838 576 aa2.29□□□□□ -2.04
UBP15YMR304W TIM10P87108 93 aa2.29□□□□□ -2.04
UBP15YMR304W YPL108WQ02872 168 aaPredicted RBP2.29□□□□□ -2.04
UBP15YMR304W SSY1Q03770 852 aa2.29□□□□□ -2.04
UBP15YMR304W NHX1Q04121 633 aa2.29□□□□□ -2.04
UBP15YMR304W DPB4Q04603 196 aaKnown RBP2.29□□□□□ -2.04
UBP15YMR304W YHC1Q05900 231 aaKnown RBP2.29□□□□□ -2.04
UBP15YMR304W BNA5Q05979 453 aa2.29□□□□□ -2.04
UBP15YMR304W YPD1Q07688 167 aa2.29□□□□□ -2.04
UBP15YMR304W YEH1Q07804 573 aa2.29□□□□□ -2.04
UBP15YMR304W SAM4Q08985 325 aaKnown RBP2.29□□□□□ -2.04
UBP15YMR304W DCP1Q12517 231 aaPredicted RBP2.29□□□□□ -2.04
UBP15YMR304W SEN1Q00416 2231 aaKnown RBP2.29□□□□□ -2.04
UBP15YMR304W ACC1Q00955 2233 aaKnown RBP2.29□□□□□ -2.04
UBP15YMR304W CCH1P50077 2039 aa2.28□□□□□ -2.04
UBP15YMR304W CDC9P04819 755 aa2.28□□□□□ -2.04
UBP15YMR304W RPP2AP05319 106 aaKnown RBP2.28□□□□□ -2.04
UBP15YMR304W MDH1P17505 334 aaKnown RBP RIP-Chip data2.28□□□□□ -2.04not detected
UBP15YMR304W ARE1P25628 610 aa2.28□□□□□ -2.04
UBP15YMR304W SIP1P32578 815 aa2.28□□□□□ -2.04
UBP15YMR304W EMP24P32803 203 aaKnown RBP2.28□□□□□ -2.04
UBP15YMR304W YOR062CP36025 268 aa2.28□□□□□ -2.04
UBP15YMR304W SNU114P36048 1008 aaKnown RBP2.28□□□□□ -2.04
UBP15YMR304W FAT1P38225 669 aa2.28□□□□□ -2.04
UBP15YMR304W YBR259WP38338 688 aa2.28□□□□□ -2.04
UBP15YMR304W SET5P38890 526 aaKnown RBP2.28□□□□□ -2.04
UBP15YMR304W END3P39013 349 aa2.28□□□□□ -2.04
UBP15YMR304W FAU1P40099 211 aa2.28□□□□□ -2.04
UBP15YMR304W YER188WP40103 239 aa2.28□□□□□ -2.04
UBP15YMR304W BAP3P41815 604 aa2.28□□□□□ -2.04
UBP15YMR304W UFE1P41834 346 aa2.28□□□□□ -2.04
UBP15YMR304W SSU1P41930 458 aa2.28□□□□□ -2.04
UBP15YMR304W ERR3P42222 437 aa2.28□□□□□ -2.04
UBP15YMR304W GNA1P43577 159 aaPredicted RBP2.28□□□□□ -2.04
UBP15YMR304W BIT61P47041 543 aa2.28□□□□□ -2.04
UBP15YMR304W ATP25Q03153 612 aa2.28□□□□□ -2.04
UBP15YMR304W YMR114CQ04471 368 aaKnown RBP2.28□□□□□ -2.04
UBP15YMR304W MDM30Q05930 598 aa2.28□□□□□ -2.04
UBP15YMR304W TPO3Q06451 622 aa2.28□□□□□ -2.04
UBP15YMR304W LCB4Q12246 624 aa2.28□□□□□ -2.04
UBP15YMR304W YLR118CQ12354 227 aa2.28□□□□□ -2.04
UBP15YMR304W COR1P07256 457 aa2.28□□□□□ -2.04
UBP15YMR304W SPE1P08432 466 aa2.28□□□□□ -2.04
UBP15YMR304W NUC1P08466 329 aa2.28□□□□□ -2.04
UBP15YMR304W SCL1P21243 252 aaKnown RBP2.28□□□□□ -2.04
UBP15YMR304W NRP1P32770 719 aaKnown RBP RIP-Chip data2.28□□□□□ -2.04not detected
UBP15YMR304W ELF1P36053 145 aa2.28□□□□□ -2.04
UBP15YMR304W SOL2P37262 315 aa2.28□□□□□ -2.04
UBP15YMR304W CTP1P38152 299 aa2.28□□□□□ -2.04
UBP15YMR304W HSL7P38274 827 aa2.28□□□□□ -2.04
UBP15YMR304W AIM2P39721 246 aa2.28□□□□□ -2.04
UBP15YMR304W ATM1P40416 690 aa2.28□□□□□ -2.04
UBP15YMR304W YIL152WP40455 235 aa2.28□□□□□ -2.04
UBP15YMR304W YKE4P40544 346 aa2.28□□□□□ -2.04
UBP15YMR304W FAR7P43592 221 aa2.28□□□□□ -2.04
UBP15YMR304W YJL163CP46996 555 aa2.28□□□□□ -2.04
UBP15YMR304W AVT1P47082 602 aa2.28□□□□□ -2.04
UBP15YMR304W TAD1P53065 400 aa2.28□□□□□ -2.04
UBP15YMR304W YGR021WP53212 290 aa2.28□□□□□ -2.04
UBP15YMR304W CWC25P53854 179 aaKnown RBP2.28□□□□□ -2.04
UBP15YMR304W RNY1Q02933 434 aaKnown RBP2.28□□□□□ -2.04
UBP15YMR304W FDC1Q03034 503 aa2.28□□□□□ -2.04
UBP15YMR304W YML018CQ03730 393 aa2.28□□□□□ -2.04
UBP15YMR304W SEG1Q04279 960 aa2.28□□□□□ -2.04
UBP15YMR304W GIM5Q04493 163 aa2.28□□□□□ -2.04
UBP15YMR304W PSR2Q07949 397 aa2.28□□□□□ -2.04
UBP15YMR304W SVS1Q12254 260 aa2.28□□□□□ -2.04
UBP15YMR304W RRI2Q12348 645 aa2.28□□□□□ -2.04
UBP15YMR304W HMS1Q12398 434 aa2.28□□□□□ -2.04
UBP15YMR304W Q0142Q9ZZW4 58 aa2.28□□□□□ -2.04
UBP15YMR304W CIT1P00890 479 aa2.28□□□□□ -2.05
UBP15YMR304W ADE5,7P07244 802 aaKnown RBP2.28□□□□□ -2.05
UBP15YMR304W CBP6P07253 162 aaPredicted RBP2.28□□□□□ -2.05
UBP15YMR304W PHO80P20052 293 aa2.28□□□□□ -2.05
UBP15YMR304W CKS1P20486 150 aaKnown RBP2.28□□□□□ -2.05
UBP15YMR304W CHA1P25379 360 aaKnown RBP2.28□□□□□ -2.05
Retrieved 100 of 5,963 RNA–protein pairs in 16.6 ms