RNA–Protein interactions for RNA: YLR394W

CST9, Transcript of SUMO E3 ligase, yeastyeast

Gene CST9, Length 1,449 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CST9YLR394W MMF1P40185 145 aaKnown RBP2.85□□□□□ -1.95
CST9YLR394W JEM1P40358 645 aa2.85□□□□□ -1.95
CST9YLR394W SEC28P40509 296 aaKnown RBP2.85□□□□□ -1.95
CST9YLR394W YIP5P53108 310 aa2.85□□□□□ -1.95
CST9YLR394W TDA1Q03533 586 aa2.85□□□□□ -1.95
CST9YLR394W MHR1Q06630 226 aa2.85□□□□□ -1.95
CST9YLR394W CUE5Q08412 411 aaKnown RBP2.85□□□□□ -1.95
CST9YLR394W CFT1Q06632 1357 aaKnown RBP2.84□□□□□ -1.96
CST9YLR394W PDE2P06776 526 aa2.84□□□□□ -1.96
CST9YLR394W SPR1P32603 445 aa2.84□□□□□ -1.96
CST9YLR394W YEF1P32622 495 aa2.84□□□□□ -1.96
CST9YLR394W RXT2P38255 430 aa2.84□□□□□ -1.96
CST9YLR394W YIL029CP40538 142 aa2.84□□□□□ -1.96
CST9YLR394W YGR117CP53270 476 aa2.84□□□□□ -1.96
CST9YLR394W MDG1P53885 366 aa2.84□□□□□ -1.96
CST9YLR394W YLR152CP54072 576 aa2.84□□□□□ -1.96
CST9YLR394W PLP2Q12017 286 aa2.84□□□□□ -1.96
CST9YLR394W IZH2Q12442 317 aa2.84□□□□□ -1.96
CST9YLR394W ATP1P07251 545 aaKnown RBP2.83□□□□□ -1.96
CST9YLR394W RVS161P25343 265 aaKnown RBP2.83□□□□□ -1.96
CST9YLR394W PUP2P32379 260 aa2.83□□□□□ -1.96
CST9YLR394W MRPL10P36520 322 aa2.83□□□□□ -1.96
CST9YLR394W GPX2P38143 162 aa2.83□□□□□ -1.96
CST9YLR394W SPP381P38282 291 aaPredicted RBP2.83□□□□□ -1.96
CST9YLR394W MNL1P38888 796 aa2.83□□□□□ -1.96
CST9YLR394W BNS1P50084 137 aa2.83□□□□□ -1.96
CST9YLR394W SPR6Q01684 191 aa2.83□□□□□ -1.96
CST9YLR394W PEX25Q02969 394 aa2.83□□□□□ -1.96
CST9YLR394W YDR541CQ03049 344 aa2.83□□□□□ -1.96
CST9YLR394W PRP3Q03338 469 aaPredicted RBP2.83□□□□□ -1.96
CST9YLR394W YGK3Q12222 375 aaPredicted RBP2.83□□□□□ -1.96
CST9YLR394W GCN2P15442 1659 aa2.83□□□□□ -1.96
CST9YLR394W YRF1-2P40105 1681 aa2.83□□□□□ -1.96
CST9YLR394W POM152P39685 1337 aa2.82□□□□□ -1.96
CST9YLR394W TY3B-IQ7LHG5 1498 aaKnown RBP2.82□□□□□ -1.96
CST9YLR394W HSP82P02829 709 aaKnown RBP2.82□□□□□ -1.96
CST9YLR394W MSI1P13712 422 aa2.82□□□□□ -1.96
CST9YLR394W MRPL4P36517 319 aa2.82□□□□□ -1.96
CST9YLR394W YSW1P38280 609 aa2.82□□□□□ -1.96
CST9YLR394W COX14P39103 70 aa2.82□□□□□ -1.96
CST9YLR394W PTI1P39927 425 aaPredicted RBP2.82□□□□□ -1.96
CST9YLR394W PAC11P40960 533 aa2.82□□□□□ -1.96
CST9YLR394W LCB3P47013 409 aa2.82□□□□□ -1.96
CST9YLR394W SHE10P53075 577 aa2.82□□□□□ -1.96
CST9YLR394W RTT102P53330 157 aa2.82□□□□□ -1.96
CST9YLR394W MTQ1P53944 314 aa2.82□□□□□ -1.96
CST9YLR394W SXM1Q04175 944 aaKnown RBP2.82□□□□□ -1.96
CST9YLR394W IPK1Q06667 281 aa2.82□□□□□ -1.96
CST9YLR394W ASA1Q06822 443 aa2.82□□□□□ -1.96
CST9YLR394W RRP5Q05022 1729 aaKnown RBP2.82□□□□□ -1.96
CST9YLR394W PAB1P04147 577 aaKnown RBP RIP-Chip data2.81□□□□□ -1.96not detected
CST9YLR394W ANR2P36090 516 aaPredicted RBP2.81□□□□□ -1.96
CST9YLR394W ADH5P38113 351 aaKnown RBP2.81□□□□□ -1.96
CST9YLR394W AIM10P39965 576 aaKnown RBP2.81□□□□□ -1.96
CST9YLR394W ATM1P40416 690 aa2.81□□□□□ -1.96
CST9YLR394W SDT1P53078 280 aa2.81□□□□□ -1.96
CST9YLR394W MLC1P53141 149 aa2.81□□□□□ -1.96
CST9YLR394W ERO1Q03103 563 aa2.81□□□□□ -1.96
CST9YLR394W PAL1Q05518 499 aaKnown RBP2.81□□□□□ -1.96
CST9YLR394W MFG1Q07684 458 aa2.81□□□□□ -1.96
CST9YLR394W IRC25Q07951 179 aa2.81□□□□□ -1.96
CST9YLR394W WTM1Q12363 437 aaKnown RBP2.81□□□□□ -1.96
CST9YLR394W YOP1Q12402 180 aa2.81□□□□□ -1.96
CST9YLR394W YCR024C-BQ3E7Z8 88 aa2.81□□□□□ -1.96
CST9YLR394W RNA1P11745 407 aaKnown RBP2.8□□□□□ -1.96
CST9YLR394W SLM5P25345 492 aaKnown RBP2.8□□□□□ -1.96
CST9YLR394W BAT1P38891 393 aaKnown RBP2.8□□□□□ -1.96
CST9YLR394W ASN2P49090 572 aaKnown RBP2.8□□□□□ -1.96
CST9YLR394W MST27P53176 234 aa2.8□□□□□ -1.96
CST9YLR394W ADD37Q03233 198 aa2.8□□□□□ -1.96
CST9YLR394W SMF3Q12078 473 aaPredicted RBP2.8□□□□□ -1.96
CST9YLR394W CEX1Q12453 761 aa2.8□□□□□ -1.96
CST9YLR394W FRE6Q12473 712 aa2.8□□□□□ -1.96
CST9YLR394W NUP192P47054 1683 aa2.79□□□□□ -1.96
CST9YLR394W TPK3P05986 398 aa2.79□□□□□ -1.96
CST9YLR394W ARF1P11076 181 aaKnown RBP2.79□□□□□ -1.96
CST9YLR394W NAM2P11325 894 aa2.79□□□□□ -1.96
CST9YLR394W COX13P32799 129 aa2.79□□□□□ -1.96
CST9YLR394W TIR2P33890 251 aa2.79□□□□□ -1.96
CST9YLR394W MCR1P36060 302 aaKnown RBP2.79□□□□□ -1.96
CST9YLR394W MIG3P39943 394 aa2.79□□□□□ -1.96
CST9YLR394W UTP18P40362 594 aaPredicted RBP2.79□□□□□ -1.96
CST9YLR394W GAB1P41733 394 aa2.79□□□□□ -1.96
CST9YLR394W EGT2P42835 1041 aa2.79□□□□□ -1.96
CST9YLR394W ATG18P43601 500 aa2.79□□□□□ -1.96
CST9YLR394W AIM24P47127 394 aa2.79□□□□□ -1.96
CST9YLR394W CRH1P53301 507 aa2.79□□□□□ -1.96
CST9YLR394W YPL107WQ02873 248 aa2.79□□□□□ -1.96
CST9YLR394W YMR102CQ03177 834 aa2.79□□□□□ -1.96
CST9YLR394W RCF1Q03713 159 aa2.79□□□□□ -1.96
CST9YLR394W TSA2Q04120 196 aa2.79□□□□□ -1.96
CST9YLR394W RIF2Q06208 395 aa2.79□□□□□ -1.96
CST9YLR394W LDS2Q08218 356 aa2.79□□□□□ -1.96
CST9YLR394W SKS1Q12505 502 aa2.79□□□□□ -1.96
CST9YLR394W NUP2P32499 720 aa2.78□□□□□ -1.96
CST9YLR394W SKT5P34226 696 aa2.78□□□□□ -1.96
CST9YLR394W EPL1P43572 832 aa2.78□□□□□ -1.96
CST9YLR394W ADA2Q02336 434 aa2.78□□□□□ -1.96
CST9YLR394W RTN1Q04947 295 aaKnown RBP2.78□□□□□ -1.96
CST9YLR394W YPR078CQ06813 372 aa2.78□□□□□ -1.96
Retrieved 100 of 5,963 RNA–protein pairs in 85.2 ms