RNA–Protein interactions for RNA: YLL039C

UBI4, Transcript of Ubiquitin, yeast

Gene UBI4, Length 1,146 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
UBI4	YLL039C	HAM1	P47119	197 aa	Known RBP	4.26	□□□□□ -1.73
UBI4	YLL039C	IBA57	P47158	497 aa		4.26	□□□□□ -1.73
UBI4	YLL039C	SDT1	P53078	280 aa		4.26	□□□□□ -1.73
UBI4	YLL039C	HOS2	P53096	452 aa	Predicted RBP	4.26	□□□□□ -1.73
UBI4	YLL039C	IDP3	P53982	420 aa	Known RBP	4.26	□□□□□ -1.73
UBI4	YLL039C	PRP38	Q00723	242 aa	Predicted RBP	4.26	□□□□□ -1.73
UBI4	YLL039C	SED5	Q01590	340 aa		4.26	□□□□□ -1.73
UBI4	YLL039C	SWF1	Q04629	336 aa		4.26	□□□□□ -1.73
UBI4	YLL039C	FAR10	Q06001	478 aa		4.26	□□□□□ -1.73
UBI4	YLL039C	CDA1	Q06702	301 aa		4.26	□□□□□ -1.73
UBI4	YLL039C	XYL2	Q07993	356 aa		4.26	□□□□□ -1.73
UBI4	YLL039C	REX4	Q08237	289 aa		4.26	□□□□□ -1.73
UBI4	YLL039C	MCH5	Q08777	521 aa		4.26	□□□□□ -1.73
UBI4	YLL039C	GUP2	Q08929	609 aa		4.26	□□□□□ -1.73
UBI4	YLL039C	SLF1	Q12034	447 aa	Known RBP	4.26	□□□□□ -1.73
UBI4	YLL039C	RCN2	Q12044	265 aa		4.26	□□□□□ -1.73
UBI4	YLL039C	HUA2	Q12134	243 aa		4.26	□□□□□ -1.73
UBI4	YLL039C	RTR2	Q12378	196 aa		4.26	□□□□□ -1.73
UBI4	YLL039C	SAS5	Q99314	248 aa		4.26	□□□□□ -1.73
UBI4	YLL039C	ATP2	P00830	511 aa	Known RBP	4.25	□□□□□ -1.73
UBI4	YLL039C	CDC31	P06704	161 aa	Known RBP	4.25	□□□□□ -1.73
UBI4	YLL039C	RPL11A	P0C0W9	174 aa	Known RBP	4.25	□□□□□ -1.73
UBI4	YLL039C	TY2A-LR1	P0C2J4	438 aa		4.25	□□□□□ -1.73
UBI4	YLL039C	TY2A-F	P0CX61	438 aa		4.25	□□□□□ -1.73
UBI4	YLL039C	TY2A-GR2	P0CX62	438 aa		4.25	□□□□□ -1.73
UBI4	YLL039C	MRP13	P12686	339 aa		4.25	□□□□□ -1.73
UBI4	YLL039C	TY2A-C	P25383	438 aa		4.25	□□□□□ -1.73
UBI4	YLL039C	AAR2	P32357	355 aa	Predicted RBP	4.25	□□□□□ -1.73
UBI4	YLL039C	OAR1	P35731	278 aa		4.25	□□□□□ -1.73
UBI4	YLL039C	YKL069W	P36088	180 aa		4.25	□□□□□ -1.73
UBI4	YLL039C	MNN2	P38069	597 aa		4.25	□□□□□ -1.73
UBI4	YLL039C	SLM4	P38247	162 aa		4.25	□□□□□ -1.73
UBI4	YLL039C	UBS1	P38290	277 aa		4.25	□□□□□ -1.73
UBI4	YLL039C	COS111	P38308	924 aa		4.25	□□□□□ -1.73
UBI4	YLL039C	FTH1	P38310	465 aa		4.25	□□□□□ -1.73
UBI4	YLL039C	MNL1	P38888	796 aa		4.25	□□□□□ -1.73
UBI4	YLL039C	ZRG8	P40021	1076 aa		4.25	□□□□□ -1.73
UBI4	YLL039C	AYR1	P40471	297 aa		4.25	□□□□□ -1.73
UBI4	YLL039C	PRM10	P42946	383 aa		4.25	□□□□□ -1.73
UBI4	YLL039C	AGP3	P43548	558 aa		4.25	□□□□□ -1.73
UBI4	YLL039C	ALR2	P43553	858 aa		4.25	□□□□□ -1.73
UBI4	YLL039C	APS3	P47064	194 aa		4.25	□□□□□ -1.73
UBI4	YLL039C	MPS3	P47069	682 aa		4.25	□□□□□ -1.73
UBI4	YLL039C	MTR3	P48240	250 aa	Predicted RBP	4.25	□□□□□ -1.73
UBI4	YLL039C	IMD3	P50095	523 aa	Known RBP	4.25	□□□□□ -1.73
UBI4	YLL039C	BIO3	P50277	480 aa		4.25	□□□□□ -1.73
UBI4	YLL039C	IMA1	P53051	589 aa		4.25	□□□□□ -1.73
UBI4	YLL039C	ROG1	P53118	685 aa		4.25	□□□□□ -1.73
UBI4	YLL039C	CWC25	P53854	179 aa	Known RBP	4.25	□□□□□ -1.73
UBI4	YLL039C	RPL6A	Q02326	176 aa	Known RBP	4.25	□□□□□ -1.73
UBI4	YLL039C	TY2A-DR2	Q03483	438 aa		4.25	□□□□□ -1.73
UBI4	YLL039C	YET2	Q04210	160 aa		4.25	□□□□□ -1.73
UBI4	YLL039C	PEX10	Q05568	337 aa		4.25	□□□□□ -1.73
UBI4	YLL039C	PDR8	Q06149	701 aa		4.25	□□□□□ -1.73
UBI4	YLL039C	MDM36	Q06820	579 aa		4.25	□□□□□ -1.73
UBI4	YLL039C	RRP40	Q08285	240 aa	Known RBP	4.25	□□□□□ -1.73
UBI4	YLL039C	SGT1	Q08446	395 aa		4.25	□□□□□ -1.73
UBI4	YLL039C	MMT2	Q08970	484 aa		4.25	□□□□□ -1.73
UBI4	YLL039C	YOR289W	Q12012	251 aa	Predicted RBP	4.25	□□□□□ -1.73
UBI4	YLL039C	TY2A-B	Q12260	438 aa		4.25	□□□□□ -1.73
UBI4	YLL039C	TY2A-OR2	Q12293	438 aa		4.25	□□□□□ -1.73
UBI4	YLL039C	HSP42	Q12329	375 aa		4.25	□□□□□ -1.73
UBI4	YLL039C	YRM1	Q12340	786 aa		4.25	□□□□□ -1.73
UBI4	YLL039C	JLP1	Q12358	412 aa		4.25	□□□□□ -1.73
UBI4	YLL039C	TY2A-DR1	Q12392	438 aa		4.25	□□□□□ -1.73
UBI4	YLL039C	TY2A-OR1	Q12439	438 aa		4.25	□□□□□ -1.73
UBI4	YLL039C	YPR064W	Q12492	139 aa		4.25	□□□□□ -1.73
UBI4	YLL039C	ADF1	Q2V2Q1	113 aa		4.25	□□□□□ -1.73
UBI4	YLL039C	RPL11B	Q3E757	174 aa	Predicted RBP	4.25	□□□□□ -1.73
UBI4	YLL039C	TY2A-DR3	Q99303	438 aa		4.25	□□□□□ -1.73
UBI4	YLL039C	BCY1	P07278	416 aa	Known RBP	4.24	□□□□□ -1.73
UBI4	YLL039C	RIP1	P08067	215 aa		4.24	□□□□□ -1.73
UBI4	YLL039C	KAR1	P11927	433 aa		4.24	□□□□□ -1.73
UBI4	YLL039C	FBA1	P14540	359 aa	Known RBP	4.24	□□□□□ -1.73
UBI4	YLL039C	CHA1	P25379	360 aa	Known RBP	4.24	□□□□□ -1.73
UBI4	YLL039C	MGR1	P25573	417 aa		4.24	□□□□□ -1.73
UBI4	YLL039C	SUI1	P32911	108 aa	Known RBP	4.24	□□□□□ -1.73
UBI4	YLL039C	SPO23	P33757	523 aa		4.24	□□□□□ -1.73
UBI4	YLL039C	MRPL15	P36523	253 aa		4.24	□□□□□ -1.73
UBI4	YLL039C	ATP3	P38077	311 aa	Known RBP	4.24	□□□□□ -1.73
UBI4	YLL039C	YBR138C	P38277	524 aa		4.24	□□□□□ -1.73
UBI4	YLL039C	YBR184W	P38299	523 aa		4.24	□□□□□ -1.73
UBI4	YLL039C	YER158C	P40095	573 aa		4.24	□□□□□ -1.73
UBI4	YLL039C	YIL086C	P40503	102 aa		4.24	□□□□□ -1.73
UBI4	YLL039C	MAM33	P40513	266 aa		4.24	□□□□□ -1.73
UBI4	YLL039C	HOC1	P47124	396 aa		4.24	□□□□□ -1.73
UBI4	YLL039C	RAD17	P48581	401 aa		4.24	□□□□□ -1.73
UBI4	YLL039C	MUP1	P50276	574 aa		4.24	□□□□□ -1.73
UBI4	YLL039C	RMR1	P53060	241 aa		4.24	□□□□□ -1.73
UBI4	YLL039C	MRPL50	P53724	139 aa		4.24	□□□□□ -1.73
UBI4	YLL039C	GOR1	P53839	350 aa		4.24	□□□□□ -1.73
UBI4	YLL039C	EFR3	Q03653	782 aa	Known RBP	4.24	□□□□□ -1.73
UBI4	YLL039C	SMP3	Q04174	516 aa		4.24	□□□□□ -1.73
UBI4	YLL039C	SPC2	Q04969	178 aa		4.24	□□□□□ -1.73
UBI4	YLL039C	BOP2	Q06150	570 aa		4.24	□□□□□ -1.73
UBI4	YLL039C	YPR172W	Q06608	200 aa		4.24	□□□□□ -1.73
UBI4	YLL039C	YOL073C	Q08232	322 aa		4.24	□□□□□ -1.73
UBI4	YLL039C	RPN5	Q12250	445 aa	Known RBP	4.24	□□□□□ -1.73
UBI4	YLL039C	YOR214C	Q12282	236 aa		4.24	□□□□□ -1.73
UBI4	YLL039C	YKL018C-A	Q3E7A7	99 aa		4.24	□□□□□ -1.73

Retrieved 100 of 5,963 RNA–protein pairs in 22.7 ms