RNA–Protein interactions for RNA: YKR100C

SKG1, Transcript of Transmembrane protein with a role in cell wall polymer composition, yeast

Gene SKG1, Length 1,068 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SKG1	YKR100C	FET3	P38993	636 aa		4.7	□□□□□ -1.66
SKG1	YKR100C	FLC2	P39719	783 aa		4.7	□□□□□ -1.66
SKG1	YKR100C	MKC7	P53379	596 aa		4.7	□□□□□ -1.66
SKG1	YKR100C	RHO3	Q00245	231 aa	Known RBP	4.7	□□□□□ -1.66
SKG1	YKR100C	YDR209C	Q03480	137 aa		4.7	□□□□□ -1.66
SKG1	YKR100C	ADH6	Q04894	360 aa	Known RBP	4.7	□□□□□ -1.66
SKG1	YKR100C	GLK1	P17709	500 aa	Known RBP	4.69	□□□□□ -1.66
SKG1	YKR100C	DBF2	P22204	572 aa		4.69	□□□□□ -1.66
SKG1	YKR100C	DPB3	P27344	201 aa		4.69	□□□□□ -1.66
SKG1	YKR100C	CAB3	P36076	571 aa		4.69	□□□□□ -1.66
SKG1	YKR100C	MUD1	P32605	298 aa	Known RBP	4.68	□□□□□ -1.66
SKG1	YKR100C	SGN1	P40561	250 aa	Known RBP RIP-Chip data	4.68	□□□□□ -1.66	not detected
SKG1	YKR100C	RBG2	P53295	368 aa	Known RBP	4.68	□□□□□ -1.66
SKG1	YKR100C	TIM10	P87108	93 aa		4.68	□□□□□ -1.66
SKG1	YKR100C	ABP140	Q08641	628 aa	Known RBP	4.68	□□□□□ -1.66
SKG1	YKR100C	RLM1	Q12224	676 aa		4.68	□□□□□ -1.66
SKG1	YKR100C	MES1	P00958	751 aa	Known RBP	4.67	□□□□□ -1.66
SKG1	YKR100C	PRP2	P20095	876 aa	Predicted RBP	4.67	□□□□□ -1.66
SKG1	YKR100C	RRT12	P25381	491 aa		4.67	□□□□□ -1.66
SKG1	YKR100C	SPT8	P38915	602 aa		4.67	□□□□□ -1.66
SKG1	YKR100C	PAP1	P29468	568 aa	Known RBP	4.66	□□□□□ -1.66
SKG1	YKR100C	SRP72	P38688	640 aa	Known RBP	4.66	□□□□□ -1.66
SKG1	YKR100C	LRP1	P38801	184 aa	Known RBP	4.66	□□□□□ -1.66
SKG1	YKR100C	TDA11	P38854	504 aa		4.66	□□□□□ -1.66
SKG1	YKR100C	YDR089W	P38966	869 aa		4.66	□□□□□ -1.66
SKG1	YKR100C	AIM32	Q04689	311 aa		4.66	□□□□□ -1.66
SKG1	YKR100C	YPR114W	Q06107	315 aa		4.66	□□□□□ -1.66
SKG1	YKR100C	RIM20	Q12033	661 aa		4.66	□□□□□ -1.66
SKG1	YKR100C	COR1	P07256	457 aa		4.65	□□□□□ -1.67
SKG1	YKR100C	SEC53	P07283	254 aa	Known RBP	4.65	□□□□□ -1.67
SKG1	YKR100C	RDS1	P25611	832 aa		4.65	□□□□□ -1.67
SKG1	YKR100C	HIR2	P32480	875 aa		4.65	□□□□□ -1.67
SKG1	YKR100C	MRPL37	P36532	105 aa		4.65	□□□□□ -1.67
SKG1	YKR100C	FAA2	P39518	744 aa		4.65	□□□□□ -1.67
SKG1	YKR100C	PRE5	P40302	234 aa	Known RBP	4.65	□□□□□ -1.67
SKG1	YKR100C	CEX1	Q12453	761 aa		4.65	□□□□□ -1.67
SKG1	YKR100C	YJR112W-A	Q3E743	109 aa		4.65	□□□□□ -1.67
SKG1	YKR100C	DEG1	P31115	442 aa	Known RBP	4.64	□□□□□ -1.67
SKG1	YKR100C	YEL045C	P32616	141 aa		4.64	□□□□□ -1.67
SKG1	YKR100C	BMH2	P34730	273 aa	Known RBP	4.64	□□□□□ -1.67
SKG1	YKR100C	PAN6	P40459	309 aa		4.64	□□□□□ -1.67
SKG1	YKR100C	YIL067C	P40514	678 aa		4.64	□□□□□ -1.67
SKG1	YKR100C	YGL108C	P53139	140 aa		4.64	□□□□□ -1.67
SKG1	YKR100C	SWC4	P53201	476 aa		4.64	□□□□□ -1.67
SKG1	YKR100C	GEP5	Q12393	293 aa		4.64	□□□□□ -1.67
SKG1	YKR100C	GIS3	Q12418	502 aa		4.64	□□□□□ -1.67
SKG1	YKR100C	SEM1	O94742	89 aa		4.63	□□□□□ -1.67
SKG1	YKR100C	MRPL8	P22353	238 aa		4.63	□□□□□ -1.67
SKG1	YKR100C	BUB3	P26449	341 aa		4.63	□□□□□ -1.67
SKG1	YKR100C	NOP4	P37838	685 aa	Known RBP	4.63	□□□□□ -1.67
SKG1	YKR100C	MBB1	P39534	108 aa		4.63	□□□□□ -1.67
SKG1	YKR100C	GCD10	P41814	478 aa		4.63	□□□□□ -1.67
SKG1	YKR100C	CUP9	P41817	306 aa		4.63	□□□□□ -1.67
SKG1	YKR100C	AVT4	P50944	713 aa		4.63	□□□□□ -1.67
SKG1	YKR100C	VPS38	Q05919	439 aa		4.63	□□□□□ -1.67
SKG1	YKR100C	HSC82	P15108	705 aa	Known RBP	4.62	□□□□□ -1.67
SKG1	YKR100C	HEM15	P16622	393 aa		4.62	□□□□□ -1.67
SKG1	YKR100C	AAC3	P18238	307 aa		4.62	□□□□□ -1.67
SKG1	YKR100C	YME1	P32795	747 aa		4.62	□□□□□ -1.67
SKG1	YKR100C	MFT1	P33441	392 aa	Known RBP	4.62	□□□□□ -1.67
SKG1	YKR100C	YBL059W	P34224	193 aa		4.62	□□□□□ -1.67
SKG1	YKR100C	FRE2	P36033	711 aa		4.62	□□□□□ -1.67
SKG1	YKR100C	MMS21	P38632	267 aa		4.62	□□□□□ -1.67
SKG1	YKR100C	GAT2	P40209	560 aa		4.62	□□□□□ -1.67
SKG1	YKR100C	YFR018C	P43599	363 aa		4.62	□□□□□ -1.67
SKG1	YKR100C	CAF40	P53829	373 aa		4.62	□□□□□ -1.67
SKG1	YKR100C	FIN1	Q03898	291 aa		4.62	□□□□□ -1.67
SKG1	YKR100C	PBA1	Q05778	276 aa		4.62	□□□□□ -1.67
SKG1	YKR100C	YDR056C	Q12025	205 aa		4.62	□□□□□ -1.67
SKG1	YKR100C	ERV2	Q12284	196 aa		4.62	□□□□□ -1.67
SKG1	YKR100C	ATP11	P32453	318 aa		4.61	□□□□□ -1.67
SKG1	YKR100C	SWI3	P32591	825 aa		4.61	□□□□□ -1.67
SKG1	YKR100C	NOP16	P40007	231 aa	Known RBP	4.61	□□□□□ -1.67
SKG1	YKR100C	RRT5	P43607	289 aa		4.61	□□□□□ -1.67
SKG1	YKR100C	BTN2	P53286	410 aa		4.61	□□□□□ -1.67
SKG1	YKR100C	TAF9	Q05027	157 aa		4.61	□□□□□ -1.67
SKG1	YKR100C	VPS54	Q12071	889 aa		4.61	□□□□□ -1.67
SKG1	YKR100C	AVL9	Q12500	764 aa		4.61	□□□□□ -1.67
SKG1	YKR100C	FOB1	O13329	566 aa		4.6	□□□□□ -1.67
SKG1	YKR100C	TPM1	P17536	199 aa	Known RBP	4.6	□□□□□ -1.67
SKG1	YKR100C	NDI1	P32340	513 aa		4.6	□□□□□ -1.67
SKG1	YKR100C	YFL067W	P43537	175 aa		4.6	□□□□□ -1.67
SKG1	YKR100C	UPF3	P48412	387 aa	Known RBP	4.6	□□□□□ -1.67
SKG1	YKR100C	LAG2	Q92325	660 aa		4.6	□□□□□ -1.67
SKG1	YKR100C	BRR1	Q99177	341 aa	Predicted RBP	4.6	□□□□□ -1.67
SKG1	YKR100C	CBS1	P14066	229 aa		4.59	□□□□□ -1.67
SKG1	YKR100C	CKA2	P19454	339 aa		4.59	□□□□□ -1.67
SKG1	YKR100C	GLC7	P32598	312 aa	Known RBP	4.59	□□□□□ -1.67
SKG1	YKR100C	PAD1	P33751	242 aa	Known RBP RIP-Chip data	4.59	□□□□□ -1.67	not detected
SKG1	YKR100C	ERP2	P39704	215 aa		4.59	□□□□□ -1.67
SKG1	YKR100C	YGR066C	P53242	292 aa		4.59	□□□□□ -1.67
SKG1	YKR100C	IBD2	P53892	351 aa		4.59	□□□□□ -1.67
SKG1	YKR100C	YNL143C	P53908	130 aa		4.59	□□□□□ -1.67
SKG1	YKR100C	MRS2	Q01926	470 aa		4.59	□□□□□ -1.67
SKG1	YKR100C	EMI1	Q04406	187 aa		4.59	□□□□□ -1.67
SKG1	YKR100C	PAL1	Q05518	499 aa	Known RBP	4.59	□□□□□ -1.67
SKG1	YKR100C	THP3	Q12049	470 aa	Known RBP	4.59	□□□□□ -1.67
SKG1	YKR100C	MDM32	Q12171	622 aa		4.59	□□□□□ -1.67
SKG1	YKR100C	YOR338W	Q99326	363 aa		4.59	□□□□□ -1.67
SKG1	YKR100C	AI5_BETA	Q9ZZX0	354 aa		4.59	□□□□□ -1.67

Retrieved 100 of 5,963 RNA–protein pairs in 30.3 ms