RNA–Protein interactions for RNA: YKR037C

SPC34, Transcript of Essential subunit of the Dam1 complex (aka DASH complex), yeast

Gene SPC34, Length 888 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SPC34	YKR037C	YRA1	Q12159	226 aa	Known RBP	4.64	□□□□□ -1.67
SPC34	YKR037C	CDC21	P06785	304 aa		4.63	□□□□□ -1.67
SPC34	YKR037C	NFT1	P0CE68	1218 aa		4.63	□□□□□ -1.67
SPC34	YKR037C	RAD57	P25301	460 aa		4.63	□□□□□ -1.67
SPC34	YKR037C	CTR86	P25355	563 aa		4.63	□□□□□ -1.67
SPC34	YKR037C	YEL043W	P32618	956 aa		4.63	□□□□□ -1.67
SPC34	YKR037C	RIM2	P38127	377 aa		4.63	□□□□□ -1.67
SPC34	YKR037C	MET30	P39014	640 aa		4.63	□□□□□ -1.67
SPC34	YKR037C	YIL169C	P40442	995 aa		4.63	□□□□□ -1.67
SPC34	YKR037C	PHB2	P50085	310 aa		4.63	□□□□□ -1.67
SPC34	YKR037C	FRE4	P53746	719 aa		4.63	□□□□□ -1.67
SPC34	YKR037C	SWS2	P53937	143 aa		4.63	□□□□□ -1.67
SPC34	YKR037C	TRM82	Q03774	444 aa		4.63	□□□□□ -1.67
SPC34	YKR037C	REX3	Q12090	404 aa		4.63	□□□□□ -1.67
SPC34	YKR037C	RUP1	Q12242	671 aa		4.63	□□□□□ -1.67
SPC34	YKR037C	ORT1	Q12375	292 aa		4.63	□□□□□ -1.67
SPC34	YKR037C	PDR18	P53756	1333 aa		4.63	□□□□□ -1.67
SPC34	YKR037C	MDN1	Q12019	4910 aa	Known RBP	4.62	□□□□□ -1.67
SPC34	YKR037C	ILV5	P06168	395 aa	Known RBP	4.62	□□□□□ -1.67
SPC34	YKR037C	CHS1	P08004	1131 aa		4.62	□□□□□ -1.67
SPC34	YKR037C	UBA1	P22515	1024 aa	Known RBP	4.62	□□□□□ -1.67
SPC34	YKR037C	YCR043C	P25361	127 aa		4.62	□□□□□ -1.67
SPC34	YKR037C	YCR022C	P25620	114 aa		4.62	□□□□□ -1.67
SPC34	YKR037C	FAA1	P30624	700 aa	Known RBP	4.62	□□□□□ -1.67
SPC34	YKR037C	NIP1	P32497	812 aa	Known RBP	4.62	□□□□□ -1.67
SPC34	YKR037C	NRP1	P32770	719 aa	Known RBP RIP-Chip data	4.62	□□□□□ -1.67	not detected
SPC34	YKR037C	PTR2	P32901	601 aa		4.62	□□□□□ -1.67
SPC34	YKR037C	KAP104	P38217	918 aa	Known RBP	4.62	□□□□□ -1.67
SPC34	YKR037C	INM1	P38710	295 aa		4.62	□□□□□ -1.67
SPC34	YKR037C	YAL037W	P39728	267 aa		4.62	□□□□□ -1.67
SPC34	YKR037C	YER079W	P40052	210 aa	Known RBP	4.62	□□□□□ -1.67
SPC34	YKR037C	FIS1	P40515	155 aa		4.62	□□□□□ -1.67
SPC34	YKR037C	NAS2	P40555	220 aa		4.62	□□□□□ -1.67
SPC34	YKR037C	DSN1	P40568	576 aa		4.62	□□□□□ -1.67
SPC34	YKR037C	DIM1	P41819	318 aa	Known RBP	4.62	□□□□□ -1.67
SPC34	YKR037C	AIM23	P47015	356 aa		4.62	□□□□□ -1.67
SPC34	YKR037C	BRO1	P48582	844 aa		4.62	□□□□□ -1.67
SPC34	YKR037C	ASN2	P49090	572 aa	Known RBP	4.62	□□□□□ -1.67
SPC34	YKR037C	YGL260W	P53056	76 aa		4.62	□□□□□ -1.67
SPC34	YKR037C	AQR1	P53943	586 aa		4.62	□□□□□ -1.67
SPC34	YKR037C	YLR281C	Q05863	155 aa		4.62	□□□□□ -1.67
SPC34	YKR037C	YDL144C	Q07589	356 aa		4.62	□□□□□ -1.67
SPC34	YKR037C	GEP3	Q08622	556 aa		4.62	□□□□□ -1.67
SPC34	YKR037C	TAF10	Q12030	206 aa		4.62	□□□□□ -1.67
SPC34	YKR037C	YPR022C	Q12139	1133 aa		4.62	□□□□□ -1.67
SPC34	YKR037C	CLN3	P13365	580 aa		4.61	□□□□□ -1.67
SPC34	YKR037C	NDI1	P32340	513 aa		4.61	□□□□□ -1.67
SPC34	YKR037C	YSC83	P32792	385 aa		4.61	□□□□□ -1.67
SPC34	YKR037C	QDR3	P38227	689 aa		4.61	□□□□□ -1.67
SPC34	YKR037C	ATG12	P38316	186 aa		4.61	□□□□□ -1.67
SPC34	YKR037C	SHO1	P40073	367 aa		4.61	□□□□□ -1.67
SPC34	YKR037C	TES1	P41903	349 aa	Known RBP	4.61	□□□□□ -1.67
SPC34	YKR037C	YNL143C	P53908	130 aa		4.61	□□□□□ -1.67
SPC34	YKR037C	GPI15	P53961	229 aa		4.61	□□□□□ -1.67
SPC34	YKR037C	ODC1	Q03028	310 aa		4.61	□□□□□ -1.67
SPC34	YKR037C	SNT309	Q06091	175 aa	Predicted RBP	4.61	□□□□□ -1.67
SPC34	YKR037C	DST1	P07273	309 aa		4.6	□□□□□ -1.67
SPC34	YKR037C	IMA3	P0CW40	589 aa		4.6	□□□□□ -1.67
SPC34	YKR037C	IMA4	P0CW41	589 aa		4.6	□□□□□ -1.67
SPC34	YKR037C	CIN8	P27895	1000 aa		4.6	□□□□□ -1.67
SPC34	YKR037C	NDC1	P32500	655 aa		4.6	□□□□□ -1.67
SPC34	YKR037C	MRPL40	P36534	297 aa		4.6	□□□□□ -1.67
SPC34	YKR037C	STP2	P38704	541 aa		4.6	□□□□□ -1.67
SPC34	YKR037C	HAT2	P39984	401 aa		4.6	□□□□□ -1.67
SPC34	YKR037C	HEM14	P40012	539 aa		4.6	□□□□□ -1.67
SPC34	YKR037C	AVT4	P50944	713 aa		4.6	□□□□□ -1.67
SPC34	YKR037C	POP6	P53218	158 aa		4.6	□□□□□ -1.67
SPC34	YKR037C	PDR16	P53860	351 aa	Known RBP	4.6	□□□□□ -1.67
SPC34	YKR037C	YNL146W	P53906	100 aa		4.6	□□□□□ -1.67
SPC34	YKR037C	RSN1	Q03516	953 aa		4.6	□□□□□ -1.67
SPC34	YKR037C	BET5	Q03630	159 aa		4.6	□□□□□ -1.67
SPC34	YKR037C	YML096W	Q04489	525 aa		4.6	□□□□□ -1.67
SPC34	YKR037C	ECM7	Q06200	448 aa		4.6	□□□□□ -1.67
SPC34	YKR037C	IPK1	Q06667	281 aa		4.6	□□□□□ -1.67
SPC34	YKR037C	IMA2	Q08295	589 aa		4.6	□□□□□ -1.67
SPC34	YKR037C	MUM3	Q08750	479 aa		4.6	□□□□□ -1.67
SPC34	YKR037C	TMS1	Q12116	473 aa		4.6	□□□□□ -1.67
SPC34	YKR037C	ATG34	Q12292	412 aa		4.6	□□□□□ -1.67
SPC34	YKR037C	SRN2	Q99176	213 aa		4.6	□□□□□ -1.67
SPC34	YKR037C	ARG4	P04076	463 aa	Predicted RBP	4.59	□□□□□ -1.67
SPC34	YKR037C	SCH9	P11792	824 aa	Known RBP	4.59	□□□□□ -1.67
SPC34	YKR037C	LSB5	P25369	354 aa		4.59	□□□□□ -1.67
SPC34	YKR037C	GLC7	P32598	312 aa	Known RBP	4.59	□□□□□ -1.67
SPC34	YKR037C	YBR056W	P38081	501 aa		4.59	□□□□□ -1.67
SPC34	YKR037C	BZZ1	P38822	633 aa		4.59	□□□□□ -1.67
SPC34	YKR037C	YND1	P40009	630 aa		4.59	□□□□□ -1.67
SPC34	YKR037C	GCD10	P41814	478 aa		4.59	□□□□□ -1.67
SPC34	YKR037C	FLC3	P53121	802 aa		4.59	□□□□□ -1.67
SPC34	YKR037C	ARK1	P53974	638 aa		4.59	□□□□□ -1.67
SPC34	YKR037C	NUP116	Q02630	1113 aa		4.59	□□□□□ -1.67
SPC34	YKR037C	URH1	Q04179	340 aa		4.59	□□□□□ -1.67
SPC34	YKR037C	SGT1	Q08446	395 aa		4.59	□□□□□ -1.67
SPC34	YKR037C	SKI7	Q08491	747 aa	Predicted RBP	4.59	□□□□□ -1.67
SPC34	YKR037C	IES4	Q08561	116 aa		4.59	□□□□□ -1.67
SPC34	YKR037C	NBL1	Q3E7Y6	73 aa		4.59	□□□□□ -1.67
SPC34	YKR037C	TAL1	P15019	335 aa	Known RBP	4.58	□□□□□ -1.68
SPC34	YKR037C	CRM1	P30822	1084 aa	Known RBP	4.58	□□□□□ -1.68
SPC34	YKR037C	SPP381	P38282	291 aa	Predicted RBP	4.58	□□□□□ -1.68
SPC34	YKR037C	RTT107	P38850	1070 aa		4.58	□□□□□ -1.68
SPC34	YKR037C	ALG8	P40351	577 aa		4.58	□□□□□ -1.68

Retrieved 100 of 5,963 RNA–protein pairs in 37 ms