RNA–Protein interactions for RNA: YJR060W

CBF1, Transcript of Basic helix-loop-helix (bHLH) protein, yeastyeast

Gene CBF1, Length 1,056 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CBF1YJR060W HEK2P38199 381 aaKnown RBP RIP-Chip data5.01□□□□□ -1.61not detected
CBF1YJR060W YBL029WP38201 376 aa5.01□□□□□ -1.61
CBF1YJR060W MTG2P38860 518 aa5.01□□□□□ -1.61
CBF1YJR060W LNP1P38878 278 aa5.01□□□□□ -1.61
CBF1YJR060W VPS41P38959 992 aa5.01□□□□□ -1.61
CBF1YJR060W PSD1P39006 500 aa5.01□□□□□ -1.61
CBF1YJR060W FRT2P39734 528 aa5.01□□□□□ -1.61
CBF1YJR060W MEP2P41948 499 aa5.01□□□□□ -1.61
CBF1YJR060W AIM22P47051 409 aa5.01□□□□□ -1.61
CBF1YJR060W FHN1P53279 174 aa5.01□□□□□ -1.61
CBF1YJR060W PRP38Q00723 242 aaPredicted RBP5.01□□□□□ -1.61
CBF1YJR060W YMR111CQ04461 462 aaPredicted RBP5.01□□□□□ -1.61
CBF1YJR060W MLH3Q12083 715 aa5.01□□□□□ -1.61
CBF1YJR060W USV1Q12132 391 aa5.01□□□□□ -1.61
CBF1YJR060W RUP1Q12242 671 aa5.01□□□□□ -1.61
CBF1YJR060W FAS1P07149 2051 aaKnown RBP5.01□□□□□ -1.61
CBF1YJR060W GCD2P12754 651 aaPredicted RBP5□□□□□ -1.61
CBF1YJR060W THR1P17423 357 aaKnown RBP5□□□□□ -1.61
CBF1YJR060W STE4P18851 423 aa5□□□□□ -1.61
CBF1YJR060W IMG1P25626 169 aa5□□□□□ -1.61
CBF1YJR060W PHO91P27514 894 aa5□□□□□ -1.61
CBF1YJR060W TDP1P38319 544 aa5□□□□□ -1.61
CBF1YJR060W RFC3P38629 340 aa5□□□□□ -1.61
CBF1YJR060W MNL1P38888 796 aa5□□□□□ -1.61
CBF1YJR060W MRX1P40050 688 aa5□□□□□ -1.61
CBF1YJR060W AYR1P40471 297 aa5□□□□□ -1.61
CBF1YJR060W MPS1P54199 764 aa5□□□□□ -1.61
CBF1YJR060W SMX3P54999 86 aaPredicted RBP5□□□□□ -1.61
CBF1YJR060W SED5Q01590 340 aa5□□□□□ -1.61
CBF1YJR060W RAD30Q04049 632 aa5□□□□□ -1.61
CBF1YJR060W BOP2Q06150 570 aa5□□□□□ -1.61
CBF1YJR060W RRP40Q08285 240 aaKnown RBP5□□□□□ -1.61
CBF1YJR060W YPR022CQ12139 1133 aa5□□□□□ -1.61
CBF1YJR060W YIL046W-AQ3E7Z4 54 aa5□□□□□ -1.61
CBF1YJR060W CSF1Q12150 2958 aa4.99□□□□□ -1.61
CBF1YJR060W STE7P06784 515 aa4.99□□□□□ -1.61
CBF1YJR060W SUI3P09064 285 aaKnown RBP4.99□□□□□ -1.61
CBF1YJR060W MRP13P12686 339 aa4.99□□□□□ -1.61
CBF1YJR060W TRX3P25372 127 aa4.99□□□□□ -1.61
CBF1YJR060W TAH1P25638 111 aaPredicted RBP4.99□□□□□ -1.61
CBF1YJR060W SPO23P33757 523 aa4.99□□□□□ -1.61
CBF1YJR060W CBP4P37267 147 aa4.99□□□□□ -1.61
CBF1YJR060W APL3P38065 1025 aa4.99□□□□□ -1.61
CBF1YJR060W SDH8P38345 138 aa4.99□□□□□ -1.61
CBF1YJR060W YHR097CP38809 366 aaKnown RBP4.99□□□□□ -1.61
CBF1YJR060W MET30P39014 640 aa4.99□□□□□ -1.61
CBF1YJR060W TPA1P40032 644 aaKnown RBP4.99□□□□□ -1.61
CBF1YJR060W YIL086CP40503 102 aa4.99□□□□□ -1.61
CBF1YJR060W CFD1P40558 293 aa4.99□□□□□ -1.61
CBF1YJR060W YGR151CP53287 111 aa4.99□□□□□ -1.61
CBF1YJR060W GOR1P53839 350 aa4.99□□□□□ -1.61
CBF1YJR060W MET31Q03081 177 aa4.99□□□□□ -1.61
CBF1YJR060W RSM10Q03201 203 aa4.99□□□□□ -1.61
CBF1YJR060W MMT1Q03218 510 aa4.99□□□□□ -1.61
CBF1YJR060W YDR124WQ04608 324 aa4.99□□□□□ -1.61
CBF1YJR060W PDR8Q06149 701 aa4.99□□□□□ -1.61
CBF1YJR060W GGA1Q06336 557 aa4.99□□□□□ -1.61
CBF1YJR060W REX4Q08237 289 aa4.99□□□□□ -1.61
CBF1YJR060W SWT1Q12104 458 aa4.99□□□□□ -1.61
CBF1YJR060W LYS21Q12122 440 aaKnown RBP4.99□□□□□ -1.61
CBF1YJR060W NSL1Q12143 216 aa4.99□□□□□ -1.61
CBF1YJR060W MHT1Q12525 324 aa4.99□□□□□ -1.61
CBF1YJR060W RAS2P01120 322 aaKnown RBP4.98□□□□□ -1.61
CBF1YJR060W DST1P07273 309 aa4.98□□□□□ -1.61
CBF1YJR060W RIP1P08067 215 aa4.98□□□□□ -1.61
CBF1YJR060W CBS2P14905 389 aa4.98□□□□□ -1.61
CBF1YJR060W CKA1P15790 372 aa4.98□□□□□ -1.61
CBF1YJR060W YCK1P23291 538 aa4.98□□□□□ -1.61
CBF1YJR060W RVS161P25343 265 aaKnown RBP4.98□□□□□ -1.61
CBF1YJR060W SLM5P25345 492 aaKnown RBP4.98□□□□□ -1.61
CBF1YJR060W YCR006CP25350 157 aa4.98□□□□□ -1.61
CBF1YJR060W MGR1P25573 417 aa4.98□□□□□ -1.61
CBF1YJR060W BUD14P27637 709 aa4.98□□□□□ -1.61
CBF1YJR060W RAD14P28519 371 aa4.98□□□□□ -1.61
CBF1YJR060W ERG1P32476 496 aaKnown RBP4.98□□□□□ -1.61
CBF1YJR060W NRP1P32770 719 aaKnown RBP RIP-Chip data4.98□□□□□ -1.61not detected
CBF1YJR060W SUI1P32911 108 aaKnown RBP4.98□□□□□ -1.61
CBF1YJR060W FRE2P36033 711 aa4.98□□□□□ -1.61
CBF1YJR060W CUE2P36075 443 aaKnown RBP4.98□□□□□ -1.61
CBF1YJR060W PRP39P39682 629 aaKnown RBP4.98□□□□□ -1.61
CBF1YJR060W YIL001WP40560 513 aa4.98□□□□□ -1.61
CBF1YJR060W PSA1P41940 361 aaKnown RBP4.98□□□□□ -1.61
CBF1YJR060W PRM10P42946 383 aa4.98□□□□□ -1.61
CBF1YJR060W ALK1P43633 760 aaKnown RBP4.98□□□□□ -1.61
CBF1YJR060W IBA57P47158 497 aa4.98□□□□□ -1.61
CBF1YJR060W RAD17P48581 401 aa4.98□□□□□ -1.61
CBF1YJR060W ATG4P53867 494 aa4.98□□□□□ -1.61
CBF1YJR060W ERG13P54839 491 aaKnown RBP4.98□□□□□ -1.61
CBF1YJR060W REX2P54964 269 aaKnown RBP4.98□□□□□ -1.61
CBF1YJR060W VPS74Q06385 345 aa4.98□□□□□ -1.61
CBF1YJR060W YEH2Q07950 538 aa4.98□□□□□ -1.61
CBF1YJR060W SGT1Q08446 395 aa4.98□□□□□ -1.61
CBF1YJR060W RPN5Q12250 445 aaKnown RBP4.98□□□□□ -1.61
CBF1YJR060W YPR064WQ12492 139 aa4.98□□□□□ -1.61
CBF1YJR060W YER175W-AQ8TGU4 54 aa4.98□□□□□ -1.61
CBF1YJR060W VCX1Q99385 411 aa4.98□□□□□ -1.61
CBF1YJR060W TEL1P38110 2787 aa4.98□□□□□ -1.61
CBF1YJR060W ARG3P05150 338 aa4.97□□□□□ -1.61
CBF1YJR060W TPK2P06245 380 aa4.97□□□□□ -1.61
CBF1YJR060W BCY1P07278 416 aaKnown RBP4.97□□□□□ -1.61
Retrieved 100 of 5,963 RNA–protein pairs in 30 ms