RNA–Protein interactions for RNA: YIR006C

PAN1, Transcript of Part of actin cytoskeleton-regulatory complex Pan1p-Sla1p-End3p, yeastyeast

Gene PAN1, Length 4,443 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PAN1YIR006C PPT1P53043 513 aa4.44□□□□□ -1.7
PAN1YIR006C RSM27P53305 110 aa4.44□□□□□ -1.7
PAN1YIR006C SAY1P53324 424 aa4.44□□□□□ -1.7
PAN1YIR006C CPR8P53728 308 aa4.44□□□□□ -1.7
PAN1YIR006C LSM7P53905 115 aaKnown RBP4.44□□□□□ -1.7
PAN1YIR006C SRO7Q12038 1033 aa4.44□□□□□ -1.7
PAN1YIR006C MET22P32179 357 aa4.44□□□□□ -1.7
PAN1YIR006C NTH1P32356 751 aa4.44□□□□□ -1.7
PAN1YIR006C CAT2P32796 670 aaKnown RBP4.44□□□□□ -1.7
PAN1YIR006C FRE2P36033 711 aa4.44□□□□□ -1.7
PAN1YIR006C JHD1P40034 492 aa4.44□□□□□ -1.7
PAN1YIR006C DLS1P40366 167 aa4.44□□□□□ -1.7
PAN1YIR006C COS12P53053 380 aa4.44□□□□□ -1.7
PAN1YIR006C COG1P53079 417 aa4.44□□□□□ -1.7
PAN1YIR006C YDR248CQ03786 193 aa4.44□□□□□ -1.7
PAN1YIR006C SYC1Q08553 188 aaPredicted RBP4.44□□□□□ -1.7
PAN1YIR006C APC2Q12440 853 aa4.44□□□□□ -1.7
PAN1YIR006C GMH1P36125 273 aa4.43□□□□□ -1.7
PAN1YIR006C CDS1P38221 457 aa4.43□□□□□ -1.7
PAN1YIR006C RMD6P39975 231 aa4.43□□□□□ -1.7
PAN1YIR006C YGL101WP53144 215 aa4.43□□□□□ -1.7
PAN1YIR006C YPL068CQ02749 293 aa4.43□□□□□ -1.7
PAN1YIR006C MSC1Q03104 513 aa4.43□□□□□ -1.7
PAN1YIR006C AIM32Q04689 311 aa4.43□□□□□ -1.7
PAN1YIR006C GLO2Q05584 274 aa4.43□□□□□ -1.7
PAN1YIR006C TRM13Q12383 476 aa4.43□□□□□ -1.7
PAN1YIR006C ERP4Q12450 207 aa4.43□□□□□ -1.7
PAN1YIR006C GAL3P13045 520 aa4.43□□□□□ -1.7
PAN1YIR006C MRP20P32387 263 aa4.43□□□□□ -1.7
PAN1YIR006C ASC1P38011 319 aaKnown RBP4.43□□□□□ -1.7
PAN1YIR006C GRE3P38715 327 aaKnown RBP RIP-Chip data4.43□□□□□ -1.7not detected
PAN1YIR006C GDH3P39708 457 aa4.43□□□□□ -1.7
PAN1YIR006C PCL6P40038 420 aa4.43□□□□□ -1.7
PAN1YIR006C ERG10P41338 398 aaKnown RBP4.43□□□□□ -1.7
PAN1YIR006C NIT2P47016 307 aa4.43□□□□□ -1.7
PAN1YIR006C AMA1P50082 593 aa4.43□□□□□ -1.7
PAN1YIR006C ERG26P53199 349 aaKnown RBP4.43□□□□□ -1.7
PAN1YIR006C NRK1P53915 240 aa4.43□□□□□ -1.7
PAN1YIR006C NAT4Q04751 285 aa4.43□□□□□ -1.7
PAN1YIR006C ECM22Q05958 814 aaPredicted RBP4.43□□□□□ -1.7
PAN1YIR006C BNI1P41832 1953 aa4.43□□□□□ -1.7
PAN1YIR006C ATP2P00830 511 aaKnown RBP4.43□□□□□ -1.7
PAN1YIR006C HIS3P06633 220 aa4.43□□□□□ -1.7
PAN1YIR006C YAR066WP0CX18 203 aa4.43□□□□□ -1.7
PAN1YIR006C YHR214WP0CX19 203 aa4.43□□□□□ -1.7
PAN1YIR006C OMA1P36163 345 aa4.43□□□□□ -1.7
PAN1YIR006C AXL2P38928 823 aa4.43□□□□□ -1.7
PAN1YIR006C AZF1P41696 914 aa4.43□□□□□ -1.7
PAN1YIR006C SSU1P41930 458 aa4.43□□□□□ -1.7
PAN1YIR006C HSV2P50079 448 aaPredicted RBP4.43□□□□□ -1.7
PAN1YIR006C RBG2P53295 368 aaKnown RBP4.43□□□□□ -1.7
PAN1YIR006C SLI1P53304 468 aa4.43□□□□□ -1.7
PAN1YIR006C MPS1P54199 764 aa4.43□□□□□ -1.7
PAN1YIR006C VBA1Q04301 562 aa4.43□□□□□ -1.7
PAN1YIR006C DPB4Q04603 196 aaKnown RBP4.43□□□□□ -1.7
PAN1YIR006C CLP1Q08685 445 aaPredicted RBP4.43□□□□□ -1.7
PAN1YIR006C YLR046CQ12253 270 aa4.43□□□□□ -1.7
PAN1YIR006C ALG7P07286 448 aa4.43□□□□□ -1.7
PAN1YIR006C SNC1P31109 117 aa4.43□□□□□ -1.7
PAN1YIR006C MRPL6P32904 214 aa4.43□□□□□ -1.7
PAN1YIR006C LOT5P34234 306 aa4.43□□□□□ -1.7
PAN1YIR006C PTC2P39966 464 aaKnown RBP4.43□□□□□ -1.7
PAN1YIR006C LSB6P42951 607 aa4.43□□□□□ -1.7
PAN1YIR006C HXT11P54862 567 aa4.43□□□□□ -1.7
PAN1YIR006C YMR099CQ03161 297 aaKnown RBP4.43□□□□□ -1.7
PAN1YIR006C LUC7Q07508 261 aaPredicted RBP4.43□□□□□ -1.7
PAN1YIR006C MDM35O60200 86 aa4.42□□□□□ -1.7
PAN1YIR006C CDC7P06243 507 aa4.42□□□□□ -1.7
PAN1YIR006C GDH1P07262 454 aaKnown RBP4.42□□□□□ -1.7
PAN1YIR006C SPS2P08459 502 aa4.42□□□□□ -1.7
PAN1YIR006C RPS4AP0CX35 261 aaKnown RBP4.42□□□□□ -1.7
PAN1YIR006C RPS4BP0CX36 261 aaKnown RBP4.42□□□□□ -1.7
PAN1YIR006C OAC1P32332 324 aa4.42□□□□□ -1.7
PAN1YIR006C SPO23P33757 523 aa4.42□□□□□ -1.7
PAN1YIR006C SHG1P38337 142 aa4.42□□□□□ -1.7
PAN1YIR006C LAG1P38703 411 aa4.42□□□□□ -1.7
PAN1YIR006C LSM12P38828 187 aaKnown RBP4.42□□□□□ -1.7
PAN1YIR006C RIM21P48565 533 aa4.42□□□□□ -1.7
PAN1YIR006C RSM28Q03430 361 aa4.42□□□□□ -1.7
PAN1YIR006C YLR413WQ06689 675 aa4.42□□□□□ -1.7
PAN1YIR006C YCT1Q12235 531 aa4.42□□□□□ -1.7
PAN1YIR006C TY1A-NL1Q12391 440 aaKnown RBP4.42□□□□□ -1.7
PAN1YIR006C HMS1Q12398 434 aa4.42□□□□□ -1.7
PAN1YIR006C HXT2P23585 541 aa4.42□□□□□ -1.7
PAN1YIR006C GEX1P25596 615 aa4.42□□□□□ -1.7
PAN1YIR006C ATG15P25641 520 aa4.42□□□□□ -1.7
PAN1YIR006C GEX2P36173 615 aa4.42□□□□□ -1.7
PAN1YIR006C ECM8P38246 354 aa4.42□□□□□ -1.7
PAN1YIR006C VPS52P39904 641 aa4.42□□□□□ -1.7
PAN1YIR006C FET5P43561 622 aa4.42□□□□□ -1.7
PAN1YIR006C BAT2P47176 376 aaKnown RBP4.42□□□□□ -1.7
PAN1YIR006C TPN1P53099 579 aa4.42□□□□□ -1.7
PAN1YIR006C DIG2Q03373 323 aaKnown RBP4.42□□□□□ -1.7
PAN1YIR006C YLR224WQ05947 369 aa4.42□□□□□ -1.7
PAN1YIR006C ASR1Q06834 288 aa4.42□□□□□ -1.7
PAN1YIR006C FRE3Q08905 711 aa4.42□□□□□ -1.7
PAN1YIR006C TIR4Q12218 487 aaPredicted RBP4.42□□□□□ -1.7
PAN1YIR006C LCB4Q12246 624 aa4.42□□□□□ -1.7
PAN1YIR006C BMT6Q12291 365 aa4.42□□□□□ -1.7
PAN1YIR006C ERD1P16151 362 aa4.42□□□□□ -1.7
Retrieved 100 of 5,963 RNA–protein pairs in 18.8 ms