RNA–Protein interactions for RNA: YGR194C

XKS1, Transcript of Xylulokinase, yeast

Gene XKS1, Length 1,803 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
XKS1	YGR194C	PET309	P32522	965 aa	Predicted RBP	4.14	□□□□□ -1.75
XKS1	YGR194C	PDR3	P33200	976 aa		4.14	□□□□□ -1.75
XKS1	YGR194C	SNU114	P36048	1008 aa	Known RBP	4.14	□□□□□ -1.75
XKS1	YGR194C	APD1	P38281	316 aa		4.14	□□□□□ -1.75
XKS1	YGR194C	RRP4	P38792	359 aa	Known RBP	4.14	□□□□□ -1.75
XKS1	YGR194C	PTI1	P39927	425 aa	Predicted RBP	4.14	□□□□□ -1.75
XKS1	YGR194C	YER184C	P39961	794 aa		4.14	□□□□□ -1.75
XKS1	YGR194C	RGI2	P40188	164 aa		4.14	□□□□□ -1.75
XKS1	YGR194C	CDC1	P40986	491 aa		4.14	□□□□□ -1.75
XKS1	YGR194C	ATG18	P43601	500 aa		4.14	□□□□□ -1.75
XKS1	YGR194C	SSN8	P47821	323 aa		4.14	□□□□□ -1.75
XKS1	YGR194C	UBC12	P52491	188 aa		4.14	□□□□□ -1.75
XKS1	YGR194C	COS1	P53822	381 aa		4.14	□□□□□ -1.75
XKS1	YGR194C	YNL181W	P53878	407 aa		4.14	□□□□□ -1.75
XKS1	YGR194C	NUP100	Q02629	959 aa		4.14	□□□□□ -1.75
XKS1	YGR194C	NUP116	Q02630	1113 aa		4.14	□□□□□ -1.75
XKS1	YGR194C	SNZ1	Q03148	297 aa		4.14	□□□□□ -1.75
XKS1	YGR194C	RPN4	Q03465	531 aa		4.14	□□□□□ -1.75
XKS1	YGR194C	ECM11	Q04110	302 aa		4.14	□□□□□ -1.75
XKS1	YGR194C	SPG3	Q04398	127 aa	Predicted RBP	4.14	□□□□□ -1.75
XKS1	YGR194C	YDR514C	Q04408	483 aa		4.14	□□□□□ -1.75
XKS1	YGR194C	YLR283W	Q05867	314 aa		4.14	□□□□□ -1.75
XKS1	YGR194C	GPN3	Q06543	272 aa		4.14	□□□□□ -1.75
XKS1	YGR194C	ASR1	Q06834	288 aa		4.14	□□□□□ -1.75
XKS1	YGR194C	TRM13	Q12383	476 aa		4.14	□□□□□ -1.75
XKS1	YGR194C	ICT1	Q12385	394 aa		4.14	□□□□□ -1.75
XKS1	YGR194C	RTN2	Q12443	393 aa		4.14	□□□□□ -1.75
XKS1	YGR194C	CTF3	Q12748	733 aa		4.14	□□□□□ -1.75
XKS1	YGR194C	YGL194C-A	Q2V2P6	80 aa		4.14	□□□□□ -1.75
XKS1	YGR194C	GCN4	P03069	281 aa		4.13	□□□□□ -1.75
XKS1	YGR194C	PEP4	P07267	405 aa	Known RBP	4.13	□□□□□ -1.75
XKS1	YGR194C	KAR1	P11927	433 aa		4.13	□□□□□ -1.75
XKS1	YGR194C	RPL3	P14126	387 aa	Known RBP	4.13	□□□□□ -1.75
XKS1	YGR194C	PRP28	P23394	588 aa		4.13	□□□□□ -1.75
XKS1	YGR194C	CNB1	P25296	175 aa		4.13	□□□□□ -1.75
XKS1	YGR194C	ERG4	P25340	473 aa		4.13	□□□□□ -1.75
XKS1	YGR194C	SNC1	P31109	117 aa		4.13	□□□□□ -1.75
XKS1	YGR194C	SPC29	P33419	253 aa		4.13	□□□□□ -1.75
XKS1	YGR194C	CBT1	P36038	271 aa	Predicted RBP	4.13	□□□□□ -1.75
XKS1	YGR194C	SDS22	P36047	338 aa		4.13	□□□□□ -1.75
XKS1	YGR194C	YKR051W	P36142	418 aa		4.13	□□□□□ -1.75
XKS1	YGR194C	MRPL40	P36534	297 aa		4.13	□□□□□ -1.75
XKS1	YGR194C	NVJ1	P38881	321 aa		4.13	□□□□□ -1.75
XKS1	YGR194C	RRG9	P40156	214 aa		4.13	□□□□□ -1.75
XKS1	YGR194C	YJL218W	P40892	196 aa	Known RBP	4.13	□□□□□ -1.75
XKS1	YGR194C	CAF16	P43569	289 aa		4.13	□□□□□ -1.75
XKS1	YGR194C	IDP3	P53982	420 aa	Known RBP	4.13	□□□□□ -1.75
XKS1	YGR194C	STP1	Q00947	519 aa		4.13	□□□□□ -1.75
XKS1	YGR194C	MTD1	Q02046	320 aa	Known RBP	4.13	□□□□□ -1.75
XKS1	YGR194C	MET31	Q03081	177 aa		4.13	□□□□□ -1.75
XKS1	YGR194C	TRM82	Q03774	444 aa		4.13	□□□□□ -1.75
XKS1	YGR194C	VHS1	Q03785	461 aa		4.13	□□□□□ -1.75
XKS1	YGR194C	EMI2	Q04409	500 aa	Known RBP	4.13	□□□□□ -1.75
XKS1	YGR194C	RNH1	Q04740	348 aa		4.13	□□□□□ -1.75
XKS1	YGR194C	LDB18	Q07887	179 aa		4.13	□□□□□ -1.75
XKS1	YGR194C	APC5	Q08683	685 aa		4.13	□□□□□ -1.75
XKS1	YGR194C	YOL107W	Q12239	342 aa		4.13	□□□□□ -1.75
XKS1	YGR194C	LCB4	Q12246	624 aa		4.13	□□□□□ -1.75
XKS1	YGR194C	RMD5	Q12508	421 aa		4.13	□□□□□ -1.75
XKS1	YGR194C	AAC1	P04710	309 aa		4.12	□□□□□ -1.75
XKS1	YGR194C	BAR1	P12630	587 aa		4.12	□□□□□ -1.75
XKS1	YGR194C	UNG1	P12887	359 aa		4.12	□□□□□ -1.75
XKS1	YGR194C	MAG1	P22134	296 aa	Known RBP	4.12	□□□□□ -1.75
XKS1	YGR194C	MNE1	P24720	663 aa		4.12	□□□□□ -1.75
XKS1	YGR194C	TAH1	P25638	111 aa	Predicted RBP	4.12	□□□□□ -1.75
XKS1	YGR194C	GSH1	P32477	678 aa		4.12	□□□□□ -1.75
XKS1	YGR194C	NDC1	P32500	655 aa		4.12	□□□□□ -1.75
XKS1	YGR194C	CAT2	P32796	670 aa	Known RBP	4.12	□□□□□ -1.75
XKS1	YGR194C	DHR2	P36009	735 aa	Predicted RBP	4.12	□□□□□ -1.75
XKS1	YGR194C	VPS51	P36116	164 aa		4.12	□□□□□ -1.75
XKS1	YGR194C	SHE3	P38272	425 aa	Known RBP	4.12	□□□□□ -1.75
XKS1	YGR194C	URA8	P38627	578 aa	Predicted RBP	4.12	□□□□□ -1.75
XKS1	YGR194C	STB5	P38699	743 aa		4.12	□□□□□ -1.75
XKS1	YGR194C	YHL041W	P38730	149 aa		4.12	□□□□□ -1.75
XKS1	YGR194C	RRF1	P38771	230 aa		4.12	□□□□□ -1.75
XKS1	YGR194C	MDM31	P38880	579 aa		4.12	□□□□□ -1.75
XKS1	YGR194C	FET3	P38993	636 aa		4.12	□□□□□ -1.75
XKS1	YGR194C	EDC3	P39998	551 aa	Known RBP	4.12	□□□□□ -1.75
XKS1	YGR194C	EMP65	P40085	556 aa		4.12	□□□□□ -1.75
XKS1	YGR194C	BUR6	P40096	142 aa		4.12	□□□□□ -1.75
XKS1	YGR194C	ELO3	P40319	345 aa		4.12	□□□□□ -1.75
XKS1	YGR194C	MPM1	P40364	252 aa		4.12	□□□□□ -1.75
XKS1	YGR194C	ERG10	P41338	398 aa	Known RBP	4.12	□□□□□ -1.75
XKS1	YGR194C	MPC1	P53157	130 aa	Known RBP	4.12	□□□□□ -1.75
XKS1	YGR194C	SHY1	P53266	389 aa		4.12	□□□□□ -1.75
XKS1	YGR194C	ERV29	P53337	310 aa		4.12	□□□□□ -1.75
XKS1	YGR194C	MKC7	P53379	596 aa		4.12	□□□□□ -1.75
XKS1	YGR194C	TIM44	Q01852	431 aa		4.12	□□□□□ -1.75
XKS1	YGR194C	SPP2	Q02521	185 aa		4.12	□□□□□ -1.75
XKS1	YGR194C	MRPS16	Q02608	121 aa		4.12	□□□□□ -1.75
XKS1	YGR194C	PHO92	Q06390	306 aa		4.12	□□□□□ -1.75
XKS1	YGR194C	HBT1	Q07653	1046 aa	Known RBP	4.12	□□□□□ -1.75
XKS1	YGR194C	YOL073C	Q08232	322 aa		4.12	□□□□□ -1.75
XKS1	YGR194C	FRE3	Q08905	711 aa		4.12	□□□□□ -1.75
XKS1	YGR194C	RTC5	Q12108	567 aa	Known RBP	4.12	□□□□□ -1.75
XKS1	YGR194C	Q0010	Q9ZZX9	128 aa		4.12	□□□□□ -1.75
XKS1	YGR194C	YEL009C-A	A0A023PZF2	135 aa		4.11	□□□□□ -1.75
XKS1	YGR194C	PET54	P10834	293 aa		4.11	□□□□□ -1.75
XKS1	YGR194C	BUD5	P25300	642 aa	Predicted RBP	4.11	□□□□□ -1.75
XKS1	YGR194C	SFP1	P32432	683 aa		4.11	□□□□□ -1.75

Retrieved 100 of 5,963 RNA–protein pairs in 10.7 ms