RNA–Protein interactions for RNA: YGL248W

PDE1, Transcript of Low-affinity cyclic AMP phosphodiesterase, yeast

Gene PDE1, Length 1,110 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PDE1	YGL248W	HAT2	P39984	401 aa		4.99	□□□□□ -1.61
PDE1	YGL248W	DSE1	P40077	573 aa		4.99	□□□□□ -1.61
PDE1	YGL248W	VRG4	P40107	337 aa		4.99	□□□□□ -1.61
PDE1	YGL248W	RPN11	P43588	306 aa	Known RBP	4.99	□□□□□ -1.61
PDE1	YGL248W	YJR154W	P47181	346 aa		4.99	□□□□□ -1.61
PDE1	YGL248W	SBH2	P52871	88 aa		4.99	□□□□□ -1.61
PDE1	YGL248W	YGL108C	P53139	140 aa		4.99	□□□□□ -1.61
PDE1	YGL248W	ZRG17	P53735	605 aa		4.99	□□□□□ -1.61
PDE1	YGL248W	GOR1	P53839	350 aa		4.99	□□□□□ -1.61
PDE1	YGL248W	RIM13	Q03792	727 aa		4.99	□□□□□ -1.61
PDE1	YGL248W	ACK1	Q07622	623 aa	Predicted RBP	4.99	□□□□□ -1.61
PDE1	YGL248W	YOR289W	Q12012	251 aa	Predicted RBP	4.99	□□□□□ -1.61
PDE1	YGL248W	YLR053C	Q12026	108 aa		4.99	□□□□□ -1.61
PDE1	YGL248W	ATG9	Q12142	997 aa		4.99	□□□□□ -1.61
PDE1	YGL248W	EMP46	Q12396	444 aa		4.99	□□□□□ -1.61
PDE1	YGL248W	PET20	Q99373	253 aa		4.99	□□□□□ -1.61
PDE1	YGL248W	COX3	P00420	269 aa		4.98	□□□□□ -1.61
PDE1	YGL248W	AAC1	P04710	309 aa		4.98	□□□□□ -1.61
PDE1	YGL248W	SIR3	P06701	978 aa		4.98	□□□□□ -1.61
PDE1	YGL248W	PPR1	P07272	904 aa	Predicted RBP	4.98	□□□□□ -1.61
PDE1	YGL248W	RIP1	P08067	215 aa		4.98	□□□□□ -1.61
PDE1	YGL248W	PCT1	P13259	424 aa		4.98	□□□□□ -1.61
PDE1	YGL248W	SGV1	P23293	657 aa	Known RBP	4.98	□□□□□ -1.61
PDE1	YGL248W	PPZ1	P26570	692 aa		4.98	□□□□□ -1.61
PDE1	YGL248W	GAC1	P28006	793 aa		4.98	□□□□□ -1.61
PDE1	YGL248W	ACH1	P32316	526 aa		4.98	□□□□□ -1.61
PDE1	YGL248W	RPC34	P32910	317 aa		4.98	□□□□□ -1.61
PDE1	YGL248W	VPS21	P36017	210 aa	Known RBP	4.98	□□□□□ -1.61
PDE1	YGL248W	DRE2	P36152	348 aa		4.98	□□□□□ -1.61
PDE1	YGL248W	ECM8	P38246	354 aa		4.98	□□□□□ -1.61
PDE1	YGL248W	YHR112C	P38716	378 aa		4.98	□□□□□ -1.61
PDE1	YGL248W	CYC2	P38909	366 aa		4.98	□□□□□ -1.61
PDE1	YGL248W	NPT1	P39683	429 aa	Known RBP	4.98	□□□□□ -1.61
PDE1	YGL248W	SEN34	P39707	275 aa		4.98	□□□□□ -1.61
PDE1	YGL248W	EDC3	P39998	551 aa	Known RBP	4.98	□□□□□ -1.61
PDE1	YGL248W	COX15	P40086	486 aa		4.98	□□□□□ -1.61
PDE1	YGL248W	YMR134W	P40207	237 aa		4.98	□□□□□ -1.61
PDE1	YGL248W	UFE1	P41834	346 aa		4.98	□□□□□ -1.61
PDE1	YGL248W	ATG27	P46989	271 aa		4.98	□□□□□ -1.61
PDE1	YGL248W	VPS73	P53142	486 aa	Known RBP	4.98	□□□□□ -1.61
PDE1	YGL248W	YGR079W	P53249	370 aa		4.98	□□□□□ -1.61
PDE1	YGL248W	YGR168C	P53293	376 aa		4.98	□□□□□ -1.61
PDE1	YGL248W	SPC98	P53540	846 aa		4.98	□□□□□ -1.61
PDE1	YGL248W	CWC25	P53854	179 aa	Known RBP	4.98	□□□□□ -1.61
PDE1	YGL248W	MAP1	Q01662	387 aa	Known RBP RIP-Chip data	4.98	□□□□□ -1.61	not detected
PDE1	YGL248W	YDR248C	Q03786	193 aa		4.98	□□□□□ -1.61
PDE1	YGL248W	ARO80	Q04052	950 aa		4.98	□□□□□ -1.61
PDE1	YGL248W	TMA10	Q06177	86 aa		4.98	□□□□□ -1.61
PDE1	YGL248W	THI3	Q07471	609 aa		4.98	□□□□□ -1.61
PDE1	YGL248W	SAM4	Q08985	325 aa	Known RBP	4.98	□□□□□ -1.61
PDE1	YGL248W	TPT1	Q12272	230 aa	Known RBP	4.98	□□□□□ -1.61
PDE1	YGL248W	RIB2	Q12362	591 aa	Known RBP	4.98	□□□□□ -1.61
PDE1	YGL248W	SNF8	Q12483	233 aa		4.98	□□□□□ -1.61
PDE1	YGL248W	ECM3	Q99252	613 aa		4.98	□□□□□ -1.61
PDE1	YGL248W	YLR415C	O13578	112 aa		4.97	□□□□□ -1.61
PDE1	YGL248W	ADE4	P04046	510 aa	Known RBP	4.97	□□□□□ -1.61
PDE1	YGL248W	RPP0	P05317	312 aa	Known RBP	4.97	□□□□□ -1.61
PDE1	YGL248W	ELO2	P25358	347 aa		4.97	□□□□□ -1.61
PDE1	YGL248W	HCM1	P25364	564 aa		4.97	□□□□□ -1.61
PDE1	YGL248W	APL1	P27351	700 aa		4.97	□□□□□ -1.61
PDE1	YGL248W	LOS1	P33418	1100 aa	Predicted RBP	4.97	□□□□□ -1.61
PDE1	YGL248W	SOF1	P33750	489 aa	Known RBP	4.97	□□□□□ -1.61
PDE1	YGL248W	MCH2	P36032	473 aa		4.97	□□□□□ -1.61
PDE1	YGL248W	RRN10	P38204	145 aa		4.97	□□□□□ -1.61
PDE1	YGL248W	SSH1	P38353	490 aa	Known RBP	4.97	□□□□□ -1.61
PDE1	YGL248W	UBA4	P38820	440 aa		4.97	□□□□□ -1.61
PDE1	YGL248W	YHR177W	P38867	453 aa		4.97	□□□□□ -1.61
PDE1	YGL248W	CIN4	P39110	191 aa		4.97	□□□□□ -1.61
PDE1	YGL248W	ELO1	P39540	310 aa		4.97	□□□□□ -1.61
PDE1	YGL248W	GAT2	P40209	560 aa		4.97	□□□□□ -1.61
PDE1	YGL248W	PCI8	P40512	444 aa		4.97	□□□□□ -1.61
PDE1	YGL248W	BAP3	P41815	604 aa		4.97	□□□□□ -1.61
PDE1	YGL248W	YPT32	P51996	222 aa	Known RBP	4.97	□□□□□ -1.61
PDE1	YGL248W	COG2	P53271	262 aa		4.97	□□□□□ -1.61
PDE1	YGL248W	RCF2	P53721	224 aa		4.97	□□□□□ -1.61
PDE1	YGL248W	ASI2	P53895	289 aa		4.97	□□□□□ -1.61
PDE1	YGL248W	RPS15	Q01855	142 aa	Known RBP	4.97	□□□□□ -1.61
PDE1	YGL248W	BER1	Q06688	274 aa	Known RBP	4.97	□□□□□ -1.61
PDE1	YGL248W	NDE2	Q07500	545 aa		4.97	□□□□□ -1.61
PDE1	YGL248W	VTS1	Q08831	523 aa	Known RBP RIP-Chip data	4.97	□□□□□ -1.61	not detected
PDE1	YGL248W	YPL199C	Q08954	240 aa		4.97	□□□□□ -1.61
PDE1	YGL248W	WTM1	Q12363	437 aa	Known RBP	4.97	□□□□□ -1.61
PDE1	YGL248W	FSH3	Q99369	266 aa		4.97	□□□□□ -1.61
PDE1	YGL248W	TAD3	Q9URQ3	322 aa		4.97	□□□□□ -1.61
PDE1	YGL248W	HIS1	P00498	297 aa	Known RBP	4.96	□□□□□ -1.62
PDE1	YGL248W	SCEI	P03882	235 aa		4.96	□□□□□ -1.62
PDE1	YGL248W	RPP2A	P05319	106 aa	Known RBP	4.96	□□□□□ -1.62
PDE1	YGL248W	RFA3	P26755	122 aa	Known RBP	4.96	□□□□□ -1.62
PDE1	YGL248W	VMA5	P31412	392 aa	Known RBP	4.96	□□□□□ -1.62
PDE1	YGL248W	RAD24	P32641	659 aa		4.96	□□□□□ -1.62
PDE1	YGL248W	RGT1	P32862	1170 aa		4.96	□□□□□ -1.62
PDE1	YGL248W	LST4	P34239	828 aa		4.96	□□□□□ -1.62
PDE1	YGL248W	GMH1	P36125	273 aa		4.96	□□□□□ -1.62
PDE1	YGL248W	SHG1	P38337	142 aa		4.96	□□□□□ -1.62
PDE1	YGL248W	IKI1	P38874	309 aa		4.96	□□□□□ -1.62
PDE1	YGL248W	ECM10	P39987	644 aa		4.96	□□□□□ -1.62
PDE1	YGL248W	MMF1	P40185	145 aa	Known RBP	4.96	□□□□□ -1.62
PDE1	YGL248W	COA1	P40452	197 aa		4.96	□□□□□ -1.62
PDE1	YGL248W	SLM1	P40485	686 aa		4.96	□□□□□ -1.62
PDE1	YGL248W	YJR141W	P47172	347 aa	Predicted RBP	4.96	□□□□□ -1.62

Retrieved 100 of 5,963 RNA–protein pairs in 14.4 ms