RNA–Protein interactions for RNA: YER029C

SMB1, Transcript of Core Sm protein Sm B, yeastyeast

Gene SMB1, Length 591 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SMB1YER029C GIT1P25346 518 aa1.95□□□□□ -2.1
SMB1YER029C ANP1P32629 500 aa1.95□□□□□ -2.1
SMB1YER029C DTR1P38125 572 aa1.95□□□□□ -2.1
SMB1YER029C LSM12P38828 187 aaKnown RBP1.95□□□□□ -2.1
SMB1YER029C YHR177WP38867 453 aa1.95□□□□□ -2.1
SMB1YER029C CTK3P46963 296 aaPredicted RBP1.95□□□□□ -2.1
SMB1YER029C ATP22P50273 684 aaPredicted RBP1.95□□□□□ -2.1
SMB1YER029C YIP5P53108 310 aa1.95□□□□□ -2.1
SMB1YER029C RTT102P53330 157 aa1.95□□□□□ -2.1
SMB1YER029C TRM112P53738 135 aaPredicted RBP1.95□□□□□ -2.1
SMB1YER029C ALF1P53904 254 aa1.95□□□□□ -2.1
SMB1YER029C MAS2P11914 482 aa1.94□□□□□ -2.1
SMB1YER029C TOA1P32773 286 aa1.94□□□□□ -2.1
SMB1YER029C DOA1P36037 715 aa1.94□□□□□ -2.1
SMB1YER029C BMT2P38278 337 aa1.94□□□□□ -2.1
SMB1YER029C SRP72P38688 640 aaKnown RBP1.94□□□□□ -2.1
SMB1YER029C BUD27P43573 796 aaKnown RBP RIP-Chip data1.94□□□□□ -2.1not detected
SMB1YER029C CIN2P46670 268 aa1.94□□□□□ -2.1
SMB1YER029C AIP1P46680 615 aaKnown RBP1.94□□□□□ -2.1
SMB1YER029C YML6P51998 286 aa1.94□□□□□ -2.1
SMB1YER029C FLC3P53121 802 aa1.94□□□□□ -2.1
SMB1YER029C REX2P54964 269 aaKnown RBP1.94□□□□□ -2.1
SMB1YER029C PRP38Q00723 242 aaPredicted RBP1.94□□□□□ -2.1
SMB1YER029C CIK1Q01649 594 aa1.94□□□□□ -2.1
SMB1YER029C GAT3Q07928 141 aa1.94□□□□□ -2.1
SMB1YER029C AAD15Q08361 143 aa1.94□□□□□ -2.1
SMB1YER029C SPE3Q12074 293 aaKnown RBP1.94□□□□□ -2.1
SMB1YER029C RPN5Q12250 445 aaKnown RBP1.94□□□□□ -2.1
SMB1YER029C SFM1Q12314 213 aa1.94□□□□□ -2.1
SMB1YER029C FOL3Q12676 427 aaPredicted RBP1.94□□□□□ -2.1
SMB1YER029C YOL085CQ99345 113 aa1.94□□□□□ -2.1
SMB1YER029C TPI1P00942 248 aaKnown RBP1.93□□□□□ -2.1
SMB1YER029C STE7P06784 515 aa1.93□□□□□ -2.1
SMB1YER029C RPL1AP0CX43 217 aaKnown RBP1.93□□□□□ -2.1
SMB1YER029C RPL1BP0CX44 217 aaKnown RBP1.93□□□□□ -2.1
SMB1YER029C ZUO1P32527 433 aaKnown RBP1.93□□□□□ -2.1
SMB1YER029C VMA8P32610 256 aaKnown RBP1.93□□□□□ -2.1
SMB1YER029C PFF1P38244 976 aa1.93□□□□□ -2.1
SMB1YER029C ECM8P38246 354 aa1.93□□□□□ -2.1
SMB1YER029C SEC27P41811 889 aaKnown RBP1.93□□□□□ -2.1
SMB1YER029C TRF5P48561 642 aaKnown RBP1.93□□□□□ -2.1
SMB1YER029C MSC3Q05812 728 aa1.93□□□□□ -2.1
SMB1YER029C YPR078CQ06813 372 aa1.93□□□□□ -2.1
SMB1YER029C LDS2Q08218 356 aa1.93□□□□□ -2.1
SMB1YER029C HTZ1Q12692 134 aaKnown RBP1.93□□□□□ -2.1
SMB1YER029C MEX67Q99257 599 aaKnown RBP1.93□□□□□ -2.1
SMB1YER029C PDE2P06776 526 aa1.92□□□□□ -2.1
SMB1YER029C RPS18AP0CX55 146 aaKnown RBP1.92□□□□□ -2.1
SMB1YER029C RPS18BP0CX56 146 aaPredicted RBP1.92□□□□□ -2.1
SMB1YER029C RRP7P25368 297 aaPredicted RBP1.92□□□□□ -2.1
SMB1YER029C PDC2P32896 925 aa1.92□□□□□ -2.1
SMB1YER029C PXA2P34230 853 aa1.92□□□□□ -2.1
SMB1YER029C FHL1P39521 936 aa1.92□□□□□ -2.1
SMB1YER029C EFM4P40516 257 aa1.92□□□□□ -2.1
SMB1YER029C LCB2P40970 561 aa1.92□□□□□ -2.1
SMB1YER029C ASN2P49090 572 aaKnown RBP1.92□□□□□ -2.1
SMB1YER029C HST1P53685 503 aa1.92□□□□□ -2.1
SMB1YER029C KTR6P54070 446 aa1.92□□□□□ -2.1
SMB1YER029C IPK1Q06667 281 aa1.92□□□□□ -2.1
SMB1YER029C TIR4Q12218 487 aaPredicted RBP1.92□□□□□ -2.1
SMB1YER029C HIF1Q12373 385 aa1.92□□□□□ -2.1
SMB1YER029C SMC6Q12749 1114 aa1.92□□□□□ -2.1
SMB1YER029C UNG1P12887 359 aa1.91□□□□□ -2.1
SMB1YER029C PUT4P15380 627 aa1.91□□□□□ -2.1
SMB1YER029C CYM1P32898 989 aa1.91□□□□□ -2.1
SMB1YER029C SHE1P38200 338 aa1.91□□□□□ -2.1
SMB1YER029C SPP381P38282 291 aaPredicted RBP1.91□□□□□ -2.1
SMB1YER029C MNL1P38888 796 aa1.91□□□□□ -2.1
SMB1YER029C RPL21AQ02753 160 aaKnown RBP1.91□□□□□ -2.1
SMB1YER029C YLR177WQ06251 628 aa1.91□□□□□ -2.1
SMB1YER029C MCH1Q07376 486 aa1.91□□□□□ -2.1
SMB1YER029C ATP16Q12165 160 aa1.91□□□□□ -2.1
SMB1YER029C RPL21BQ12672 160 aaKnown RBP1.91□□□□□ -2.1
SMB1YER029C BI3Q9ZZW7 517 aa1.91□□□□□ -2.1
SMB1YER029C SOL2P37262 315 aa1.9□□□□□ -2.11
SMB1YER029C YFL012WP43580 148 aa1.9□□□□□ -2.11
SMB1YER029C YGR067CP53243 804 aa1.9□□□□□ -2.11
SMB1YER029C GYL1Q04322 720 aa1.9□□□□□ -2.11
SMB1YER029C SLF1Q12034 447 aaKnown RBP1.9□□□□□ -2.11
SMB1YER029C SLM3Q12093 417 aa1.9□□□□□ -2.11
SMB1YER029C YDR061WQ12298 539 aa1.9□□□□□ -2.11
SMB1YER029C HEM4P06174 275 aa1.89□□□□□ -2.11
SMB1YER029C TPS2P31688 896 aaKnown RBP1.89□□□□□ -2.11
SMB1YER029C VAM7P32912 316 aa1.89□□□□□ -2.11
SMB1YER029C SMP1P38128 452 aa1.89□□□□□ -2.11
SMB1YER029C WSS1P38838 269 aa1.89□□□□□ -2.11
SMB1YER029C SEC9P40357 651 aa1.89□□□□□ -2.11
SMB1YER029C PFS2P42841 465 aaKnown RBP1.89□□□□□ -2.11
SMB1YER029C BIO3P50277 480 aa1.89□□□□□ -2.11
SMB1YER029C YGR015CP53208 328 aa1.89□□□□□ -2.11
SMB1YER029C ERO1Q03103 563 aa1.89□□□□□ -2.11
SMB1YER029C YDR115WQ04598 105 aa1.89□□□□□ -2.11
SMB1YER029C YDL109CQ12103 647 aa1.89□□□□□ -2.11
SMB1YER029C RFM1Q12192 310 aa1.89□□□□□ -2.11
SMB1YER029C PRM7Q12459 698 aa1.89□□□□□ -2.11
SMB1YER029C RPS19AP07280 144 aaKnown RBP1.88□□□□□ -2.11
SMB1YER029C RPS19BP07281 144 aaPredicted RBP1.88□□□□□ -2.11
SMB1YER029C RPL23AP0CX41 137 aaKnown RBP1.88□□□□□ -2.11
SMB1YER029C RPL23BP0CX42 137 aaKnown RBP1.88□□□□□ -2.11
SMB1YER029C RPL16AP26784 199 aaKnown RBP1.88□□□□□ -2.11
Retrieved 100 of 5,963 RNA–protein pairs in 24.3 ms