RNA–Protein interactions for RNA: YDR317W

HIM1, Transcript of Protein of unknown function involved in DNA repair, yeast

Gene HIM1, Length 1,245 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
HIM1	YDR317W	SIF2	P38262	535 aa		3.59	□□□□□ -1.83
HIM1	YDR317W	ATG12	P38316	186 aa		3.59	□□□□□ -1.83
HIM1	YDR317W	TAF9	Q05027	157 aa		3.59	□□□□□ -1.83
HIM1	YDR317W	TIM18	Q08749	192 aa		3.59	□□□□□ -1.83
HIM1	YDR317W	YPQ1	Q12010	308 aa		3.59	□□□□□ -1.83
HIM1	YDR317W	HSP42	Q12329	375 aa		3.59	□□□□□ -1.83
HIM1	YDR317W	SFI1	Q12369	946 aa		3.59	□□□□□ -1.83
HIM1	YDR317W	RPS3	P05750	240 aa	Known RBP	3.58	□□□□□ -1.84
HIM1	YDR317W	RPS14A	P06367	137 aa	Known RBP	3.58	□□□□□ -1.84
HIM1	YDR317W	REC107	P21651	314 aa		3.58	□□□□□ -1.84
HIM1	YDR317W	HXT3	P32466	567 aa	Known RBP	3.58	□□□□□ -1.84
HIM1	YDR317W	SWE1	P32944	819 aa		3.58	□□□□□ -1.84
HIM1	YDR317W	NTC20	P38302	140 aa	Predicted RBP	3.58	□□□□□ -1.84
HIM1	YDR317W	RPS14B	P39516	138 aa	Known RBP	3.58	□□□□□ -1.84
HIM1	YDR317W	FHL1	P39521	936 aa		3.58	□□□□□ -1.84
HIM1	YDR317W	MST28	P39552	234 aa		3.58	□□□□□ -1.84
HIM1	YDR317W	CHS6	P40955	746 aa		3.58	□□□□□ -1.84
HIM1	YDR317W	OST1	P41543	476 aa	Known RBP	3.58	□□□□□ -1.84
HIM1	YDR317W	VMA13	P41807	478 aa	Known RBP	3.58	□□□□□ -1.84
HIM1	YDR317W	UFE1	P41834	346 aa		3.58	□□□□□ -1.84
HIM1	YDR317W	YGR210C	P42942	411 aa		3.58	□□□□□ -1.84
HIM1	YDR317W	DLD2	P46681	530 aa	Known RBP	3.58	□□□□□ -1.84
HIM1	YDR317W	NCA3	P46955	337 aa		3.58	□□□□□ -1.84
HIM1	YDR317W	RSC1	P53236	928 aa		3.58	□□□□□ -1.84
HIM1	YDR317W	ADD37	Q03233	198 aa		3.58	□□□□□ -1.84
HIM1	YDR317W	TAF11	Q04226	346 aa		3.58	□□□□□ -1.84
HIM1	YDR317W	RRP45	Q05636	305 aa	Known RBP	3.58	□□□□□ -1.84
HIM1	YDR317W	ARG4	P04076	463 aa	Predicted RBP	3.57	□□□□□ -1.84
HIM1	YDR317W	CDC31	P06704	161 aa	Known RBP	3.57	□□□□□ -1.84
HIM1	YDR317W	TIP1	P27654	210 aa	Predicted RBP	3.57	□□□□□ -1.84
HIM1	YDR317W	SGE1	P33335	543 aa		3.57	□□□□□ -1.84
HIM1	YDR317W	MIX23	P38162	196 aa		3.57	□□□□□ -1.84
HIM1	YDR317W	DED81	P38707	554 aa	Known RBP	3.57	□□□□□ -1.84
HIM1	YDR317W	PRE5	P40302	234 aa	Known RBP	3.57	□□□□□ -1.84
HIM1	YDR317W	PHO86	P46956	311 aa		3.57	□□□□□ -1.84
HIM1	YDR317W	YJR079W	P47126	109 aa		3.57	□□□□□ -1.84
HIM1	YDR317W	SPG3	Q04398	127 aa	Predicted RBP	3.57	□□□□□ -1.84
HIM1	YDR317W	SGT1	Q08446	395 aa		3.57	□□□□□ -1.84
HIM1	YDR317W	VPS54	Q12071	889 aa		3.57	□□□□□ -1.84
HIM1	YDR317W	YPR022C	Q12139	1133 aa		3.57	□□□□□ -1.84
HIM1	YDR317W	EMP46	Q12396	444 aa		3.57	□□□□□ -1.84
HIM1	YDR317W	CCH1	P50077	2039 aa		3.56	□□□□□ -1.84
HIM1	YDR317W	FUR1	P18562	216 aa	Known RBP	3.56	□□□□□ -1.84
HIM1	YDR317W	PHO13	P19881	312 aa		3.56	□□□□□ -1.84
HIM1	YDR317W	YEL045C	P32616	141 aa		3.56	□□□□□ -1.84
HIM1	YDR317W	SRB2	P34162	210 aa		3.56	□□□□□ -1.84
HIM1	YDR317W	EBP2	P36049	427 aa	Known RBP	3.56	□□□□□ -1.84
HIM1	YDR317W	ECM13	P38195	257 aa		3.56	□□□□□ -1.84
HIM1	YDR317W	MTC6	P38849	526 aa		3.56	□□□□□ -1.84
HIM1	YDR317W	CCT2	P39076	527 aa	Known RBP	3.56	□□□□□ -1.84
HIM1	YDR317W	YEL075C	P39972	122 aa		3.56	□□□□□ -1.84
HIM1	YDR317W	SNZ3	P43545	298 aa		3.56	□□□□□ -1.84
HIM1	YDR317W	SRB7	P47822	140 aa		3.56	□□□□□ -1.84
HIM1	YDR317W	YGR111W	P53265	400 aa		3.56	□□□□□ -1.84
HIM1	YDR317W	FRE4	P53746	719 aa		3.56	□□□□□ -1.84
HIM1	YDR317W	SNZ2	P53824	298 aa		3.56	□□□□□ -1.84
HIM1	YDR317W	SXM1	Q04175	944 aa	Known RBP	3.56	□□□□□ -1.84
HIM1	YDR317W	ERV41	Q04651	352 aa		3.56	□□□□□ -1.84
HIM1	YDR317W	DIS3	Q08162	1001 aa	Known RBP	3.56	□□□□□ -1.84
HIM1	YDR317W	SIL1	Q08199	421 aa		3.56	□□□□□ -1.84
HIM1	YDR317W	MEX67	Q99257	599 aa	Known RBP	3.56	□□□□□ -1.84
HIM1	YDR317W	TEF1	P02994	458 aa	Known RBP	3.55	□□□□□ -1.84
HIM1	YDR317W	PAB1	P04147	577 aa	Known RBP RIP-Chip data	3.55	□□□□□ -1.84	not detected
HIM1	YDR317W	RIP1	P08067	215 aa		3.55	□□□□□ -1.84
HIM1	YDR317W	PUT4	P15380	627 aa		3.55	□□□□□ -1.84
HIM1	YDR317W	SPO7	P18410	259 aa		3.55	□□□□□ -1.84
HIM1	YDR317W	LYS1	P38998	373 aa	RIP-Chip data	3.55	□□□□□ -1.84	not detected
HIM1	YDR317W	ASG7	P46993	209 aa		3.55	□□□□□ -1.84
HIM1	YDR317W	PRP24	P49960	444 aa	Known RBP	3.55	□□□□□ -1.84
HIM1	YDR317W	SDT1	P53078	280 aa		3.55	□□□□□ -1.84
HIM1	YDR317W	PEX31	P53203	462 aa		3.55	□□□□□ -1.84
HIM1	YDR317W	YMR181C	Q03231	154 aa		3.55	□□□□□ -1.84
HIM1	YDR317W	GYL1	Q04322	720 aa		3.55	□□□□□ -1.84
HIM1	YDR317W	RTN1	Q04947	295 aa	Known RBP	3.55	□□□□□ -1.84
HIM1	YDR317W	TMC1	Q08422	150 aa	Predicted RBP	3.55	□□□□□ -1.84
HIM1	YDR317W	HIS1	P00498	297 aa	Known RBP	3.54	□□□□□ -1.84
HIM1	YDR317W	SPO12	P17123	173 aa		3.54	□□□□□ -1.84
HIM1	YDR317W	DBF4	P32325	704 aa		3.54	□□□□□ -1.84
HIM1	YDR317W	ERG3	P32353	365 aa		3.54	□□□□□ -1.84
HIM1	YDR317W	URA8	P38627	578 aa	Predicted RBP	3.54	□□□□□ -1.84
HIM1	YDR317W	PRM9	P39551	298 aa		3.54	□□□□□ -1.84
HIM1	YDR317W	HEM14	P40012	539 aa		3.54	□□□□□ -1.84
HIM1	YDR317W	OSW5	P40219	148 aa		3.54	□□□□□ -1.84
HIM1	YDR317W	PRM5	P40476	318 aa		3.54	□□□□□ -1.84
HIM1	YDR317W	RPS0B	P46654	252 aa	Known RBP	3.54	□□□□□ -1.84
HIM1	YDR317W	HMS2	P47175	358 aa		3.54	□□□□□ -1.84
HIM1	YDR317W	YNL247W	P53852	767 aa	Known RBP	3.54	□□□□□ -1.84
HIM1	YDR317W	AIM32	Q04689	311 aa		3.54	□□□□□ -1.84
HIM1	YDR317W	YDR222W	Q04925	415 aa		3.54	□□□□□ -1.84
HIM1	YDR317W	BI3	Q9ZZW7	517 aa		3.54	□□□□□ -1.84
HIM1	YDR317W	RAD3	P06839	778 aa		3.53	□□□□□ -1.84
HIM1	YDR317W	PET123	P17558	318 aa		3.53	□□□□□ -1.84
HIM1	YDR317W	ARF2	P19146	181 aa	Known RBP	3.53	□□□□□ -1.84
HIM1	YDR317W	TRX1	P22217	103 aa	Known RBP	3.53	□□□□□ -1.84
HIM1	YDR317W	ITR1	P30605	584 aa		3.53	□□□□□ -1.84
HIM1	YDR317W	BLI1	P35727	113 aa		3.53	□□□□□ -1.84
HIM1	YDR317W	KKQ8	P36004	724 aa		3.53	□□□□□ -1.84
HIM1	YDR317W	MRPL40	P36534	297 aa		3.53	□□□□□ -1.84
HIM1	YDR317W	SWC5	P38326	303 aa		3.53	□□□□□ -1.84
HIM1	YDR317W	HIS2	P38635	335 aa		3.53	□□□□□ -1.84

Retrieved 100 of 5,963 RNA–protein pairs in 65.9 ms