RNA–Protein interactions for RNA: YDL074C

BRE1, Transcript of E3 ubiquitin ligase, yeastyeast

Gene BRE1, Length 2,103 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
BRE1YDL074C YMR310CQ04867 317 aaPredicted RBP1.99□□□□□ -2.09
BRE1YDL074C VID22Q05934 901 aa1.99□□□□□ -2.09
BRE1YDL074C TDA6Q06466 467 aa1.99□□□□□ -2.09
BRE1YDL074C RRP15Q06511 250 aaPredicted RBP1.99□□□□□ -2.09
BRE1YDL074C REH1Q06709 432 aa1.99□□□□□ -2.09
BRE1YDL074C YLR040CQ07988 224 aa1.99□□□□□ -2.09
BRE1YDL074C NGL1Q08213 363 aaKnown RBP1.99□□□□□ -2.09
BRE1YDL074C IRC13Q08630 104 aa1.99□□□□□ -2.09
BRE1YDL074C YPL199CQ08954 240 aa1.99□□□□□ -2.09
BRE1YDL074C SAM4Q08985 325 aaKnown RBP1.99□□□□□ -2.09
BRE1YDL074C SCM3Q12334 223 aa1.99□□□□□ -2.09
BRE1YDL074C PNO1Q99216 274 aaKnown RBP1.99□□□□□ -2.09
BRE1YDL074C Q0182Q9ZZW1 134 aa1.99□□□□□ -2.09
BRE1YDL074C QCR7P00128 127 aa1.98□□□□□ -2.09
BRE1YDL074C HIP1P06775 603 aa1.98□□□□□ -2.09
BRE1YDL074C ADE5,7P07244 802 aaKnown RBP1.98□□□□□ -2.09
BRE1YDL074C ALG7P07286 448 aa1.98□□□□□ -2.09
BRE1YDL074C NFT1P0CE68 1218 aa1.98□□□□□ -2.09
BRE1YDL074C THR1P17423 357 aaKnown RBP1.98□□□□□ -2.09
BRE1YDL074C PHO80P20052 293 aa1.98□□□□□ -2.09
BRE1YDL074C CHA1P25379 360 aaKnown RBP1.98□□□□□ -2.09
BRE1YDL074C MGR1P25573 417 aa1.98□□□□□ -2.09
BRE1YDL074C PBN1P25580 416 aa1.98□□□□□ -2.09
BRE1YDL074C HSP30P25619 332 aa1.98□□□□□ -2.09
BRE1YDL074C PTC6P25646 442 aa1.98□□□□□ -2.09
BRE1YDL074C ERG1P32476 496 aaKnown RBP1.98□□□□□ -2.09
BRE1YDL074C KAP122P32767 1081 aa1.98□□□□□ -2.09
BRE1YDL074C EMC3P36039 253 aa1.98□□□□□ -2.09
BRE1YDL074C RSM22P36056 628 aa1.98□□□□□ -2.09
BRE1YDL074C BNA4P38169 460 aa1.98□□□□□ -2.09
BRE1YDL074C STP2P38704 541 aa1.98□□□□□ -2.09
BRE1YDL074C CEM1P39525 442 aa1.98□□□□□ -2.09
BRE1YDL074C SWM2P40342 146 aa1.98□□□□□ -2.09
BRE1YDL074C SER2P42941 309 aa1.98□□□□□ -2.09
BRE1YDL074C ALR2P43553 858 aa1.98□□□□□ -2.09
BRE1YDL074C APS3P47064 194 aa1.98□□□□□ -2.09
BRE1YDL074C YAE1P47118 141 aaPredicted RBP1.98□□□□□ -2.09
BRE1YDL074C BAT2P47176 376 aaKnown RBP1.98□□□□□ -2.09
BRE1YDL074C RIM21P48565 533 aa1.98□□□□□ -2.09
BRE1YDL074C BIO3P50277 480 aa1.98□□□□□ -2.09
BRE1YDL074C SPT20P50875 604 aa1.98□□□□□ -2.09
BRE1YDL074C MTO1P53070 669 aa1.98□□□□□ -2.09
BRE1YDL074C MPC1P53157 130 aaKnown RBP1.98□□□□□ -2.09
BRE1YDL074C ATF2P53296 535 aa1.98□□□□□ -2.09
BRE1YDL074C SNF12P53628 566 aa1.98□□□□□ -2.09
BRE1YDL074C CPR8P53728 308 aa1.98□□□□□ -2.09
BRE1YDL074C GIM3P53900 129 aa1.98□□□□□ -2.09
BRE1YDL074C AQR1P53943 586 aa1.98□□□□□ -2.09
BRE1YDL074C RHO4Q00246 291 aa1.98□□□□□ -2.09
BRE1YDL074C ROT1Q03691 256 aa1.98□□□□□ -2.09
BRE1YDL074C ISR1Q06098 443 aaKnown RBP1.98□□□□□ -2.09
BRE1YDL074C EAF1Q06337 982 aa1.98□□□□□ -2.09
BRE1YDL074C YPR172WQ06608 200 aa1.98□□□□□ -2.09
BRE1YDL074C IPK1Q06667 281 aa1.98□□□□□ -2.09
BRE1YDL074C LUC7Q07508 261 aaPredicted RBP1.98□□□□□ -2.09
BRE1YDL074C BRE4Q07660 1125 aa1.98□□□□□ -2.09
BRE1YDL074C RRP40Q08285 240 aaKnown RBP1.98□□□□□ -2.09
BRE1YDL074C RTT10Q08924 1013 aa1.98□□□□□ -2.09
BRE1YDL074C SRO7Q12038 1033 aa1.98□□□□□ -2.09
BRE1YDL074C RCN2Q12044 265 aa1.98□□□□□ -2.09
BRE1YDL074C HAL9Q12180 1030 aa1.98□□□□□ -2.09
BRE1YDL074C SIA1Q12212 622 aa1.98□□□□□ -2.09
BRE1YDL074C NFI1Q12216 726 aa1.98□□□□□ -2.09
BRE1YDL074C TPO4Q12256 659 aa1.98□□□□□ -2.09
BRE1YDL074C YPR064WQ12492 139 aa1.98□□□□□ -2.09
BRE1YDL074C RRP12Q12754 1228 aaKnown RBP1.98□□□□□ -2.09
BRE1YDL074C SUS1Q6WNK7 96 aa1.98□□□□□ -2.09
BRE1YDL074C CCH1P50077 2039 aa1.98□□□□□ -2.09
BRE1YDL074C RPS14AP06367 137 aaKnown RBP1.97□□□□□ -2.09
BRE1YDL074C GAL7P08431 366 aa1.97□□□□□ -2.09
BRE1YDL074C HOM2P13663 365 aaKnown RBP1.97□□□□□ -2.09
BRE1YDL074C DPM1P14020 267 aaKnown RBP1.97□□□□□ -2.09
BRE1YDL074C RED1P14291 827 aa1.97□□□□□ -2.09
BRE1YDL074C YAP1P19880 650 aaKnown RBP1.97□□□□□ -2.09
BRE1YDL074C NPR1P22211 790 aa1.97□□□□□ -2.09
BRE1YDL074C IDH2P28241 369 aaKnown RBP1.97□□□□□ -2.09
BRE1YDL074C ITR1P30605 584 aa1.97□□□□□ -2.09
BRE1YDL074C KRE6P32486 720 aa1.97□□□□□ -2.09
BRE1YDL074C MKK1P32490 508 aa1.97□□□□□ -2.09
BRE1YDL074C HBS1P32769 611 aaKnown RBP1.97□□□□□ -2.09
BRE1YDL074C LHP1P33399 275 aaKnown RBP1.97□□□□□ -2.09
BRE1YDL074C BET3P36149 193 aa1.97□□□□□ -2.09
BRE1YDL074C GPX2P38143 162 aa1.97□□□□□ -2.09
BRE1YDL074C EHT1P38295 451 aa1.97□□□□□ -2.09
BRE1YDL074C HXT5P38695 592 aa1.97□□□□□ -2.09
BRE1YDL074C IPI1P38803 334 aaPredicted RBP1.97□□□□□ -2.09
BRE1YDL074C BAT1P38891 393 aaKnown RBP1.97□□□□□ -2.09
BRE1YDL074C MET30P39014 640 aa1.97□□□□□ -2.09
BRE1YDL074C RPS14BP39516 138 aaKnown RBP1.97□□□□□ -2.09
BRE1YDL074C ELO1P39540 310 aa1.97□□□□□ -2.09
BRE1YDL074C YIL166CP40445 542 aa1.97□□□□□ -2.09
BRE1YDL074C QDR2P40474 542 aa1.97□□□□□ -2.09
BRE1YDL074C YIL067CP40514 678 aa1.97□□□□□ -2.09
BRE1YDL074C GDS1P41913 522 aa1.97□□□□□ -2.09
BRE1YDL074C YFR020WP43600 232 aa1.97□□□□□ -2.09
BRE1YDL074C RPS0BP46654 252 aaKnown RBP1.97□□□□□ -2.09
BRE1YDL074C MDV1P47025 714 aa1.97□□□□□ -2.09
BRE1YDL074C FAA4P47912 694 aaKnown RBP1.97□□□□□ -2.09
BRE1YDL074C SAM37P50110 327 aa1.97□□□□□ -2.09
BRE1YDL074C NBP35P52920 328 aa1.97□□□□□ -2.09
Retrieved 100 of 5,963 RNA–protein pairs in 17.9 ms