RNA–Protein interactions for RNA: YBR275C

RIF1, Transcript of Protein that binds to the Rap1p C-terminus, yeast

Gene RIF1, Length 5,751 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RIF1	YBR275C	PRP39	P39682	629 aa	Known RBP	2.74	□□□□□ -1.97
RIF1	YBR275C	YPL039W	Q03080	316 aa		2.74	□□□□□ -1.97
RIF1	YBR275C	SVL3	Q03088	825 aa	Known RBP	2.74	□□□□□ -1.97
RIF1	YBR275C	YLR012C	Q07927	99 aa		2.74	□□□□□ -1.97
RIF1	YBR275C	GIS3	Q12418	502 aa		2.74	□□□□□ -1.97
RIF1	YBR275C	CCW14	O13547	238 aa		2.73	□□□□□ -1.97
RIF1	YBR275C	RPL6B	P05739	176 aa	Known RBP	2.73	□□□□□ -1.97
RIF1	YBR275C	PDR1	P12383	1068 aa		2.73	□□□□□ -1.97
RIF1	YBR275C	GIT1	P25346	518 aa		2.73	□□□□□ -1.97
RIF1	YBR275C	RNP1	P32385	249 aa		2.73	□□□□□ -1.97
RIF1	YBR275C	AIM26	P32858	118 aa		2.73	□□□□□ -1.97
RIF1	YBR275C	ECM15	P35195	104 aa		2.73	□□□□□ -1.97
RIF1	YBR275C	YBR063C	P38083	404 aa		2.73	□□□□□ -1.97
RIF1	YBR275C	NUP82	P40368	713 aa		2.73	□□□□□ -1.97
RIF1	YBR275C	SFH5	P47008	294 aa		2.73	□□□□□ -1.97
RIF1	YBR275C	YJR012C	P47087	207 aa		2.73	□□□□□ -1.97
RIF1	YBR275C	MNP1	P53163	194 aa	Predicted RBP	2.73	□□□□□ -1.97
RIF1	YBR275C	PKP2	P53170	491 aa		2.73	□□□□□ -1.97
RIF1	YBR275C	YNR048W	P53740	393 aa		2.73	□□□□□ -1.97
RIF1	YBR275C	SLG1	P54867	378 aa		2.73	□□□□□ -1.97
RIF1	YBR275C	LOT6	Q07923	191 aa		2.73	□□□□□ -1.97
RIF1	YBR275C	UAF30	Q08747	228 aa		2.73	□□□□□ -1.97
RIF1	YBR275C	HER1	Q12276	1246 aa		2.73	□□□□□ -1.97
RIF1	YBR275C	JLP1	Q12358	412 aa		2.73	□□□□□ -1.97
RIF1	YBR275C	SKM1	Q12469	655 aa		2.73	□□□□□ -1.97
RIF1	YBR275C	ALG1	P16661	449 aa		2.73	□□□□□ -1.97
RIF1	YBR275C	RNR3	P21672	869 aa	Known RBP	2.73	□□□□□ -1.97
RIF1	YBR275C	TRX2	P22803	104 aa	Known RBP	2.73	□□□□□ -1.97
RIF1	YBR275C	APE2	P32454	952 aa	Known RBP	2.73	□□□□□ -1.97
RIF1	YBR275C	DUG2	P38149	878 aa		2.73	□□□□□ -1.97
RIF1	YBR275C	RRN10	P38204	145 aa		2.73	□□□□□ -1.97
RIF1	YBR275C	GAA1	P39012	614 aa		2.73	□□□□□ -1.97
RIF1	YBR275C	VHT1	P53241	593 aa		2.73	□□□□□ -1.97
RIF1	YBR275C	MAL13	P53338	473 aa		2.73	□□□□□ -1.97
RIF1	YBR275C	Q0182	Q9ZZW1	134 aa		2.73	□□□□□ -1.97
RIF1	YBR275C	RPS14A	P06367	137 aa	Known RBP	2.73	□□□□□ -1.97
RIF1	YBR275C	ELO2	P25358	347 aa		2.73	□□□□□ -1.97
RIF1	YBR275C	MNS1	P32906	549 aa		2.73	□□□□□ -1.97
RIF1	YBR275C	TCD1	P38756	429 aa		2.73	□□□□□ -1.97
RIF1	YBR275C	YHR035W	P38769	630 aa		2.73	□□□□□ -1.97
RIF1	YBR275C	RPS14B	P39516	138 aa	Known RBP	2.73	□□□□□ -1.97
RIF1	YBR275C	YCK3	P39962	524 aa		2.73	□□□□□ -1.97
RIF1	YBR275C	PDS1	P40316	373 aa	Predicted RBP	2.73	□□□□□ -1.97
RIF1	YBR275C	ZIM17	P42844	174 aa		2.73	□□□□□ -1.97
RIF1	YBR275C	JHD2	P47156	728 aa	Predicted RBP	2.73	□□□□□ -1.97
RIF1	YBR275C	CCC1	P47818	322 aa		2.73	□□□□□ -1.97
RIF1	YBR275C	SHY1	P53266	389 aa		2.73	□□□□□ -1.97
RIF1	YBR275C	IPI3	P53877	555 aa		2.73	□□□□□ -1.97
RIF1	YBR275C	TRM82	Q03774	444 aa		2.73	□□□□□ -1.97
RIF1	YBR275C	SPC19	Q03954	165 aa		2.73	□□□□□ -1.97
RIF1	YBR275C	RTN1	Q04947	295 aa	Known RBP	2.73	□□□□□ -1.97
RIF1	YBR275C	ATP16	Q12165	160 aa		2.73	□□□□□ -1.97
RIF1	YBR275C	MDM32	Q12171	622 aa		2.73	□□□□□ -1.97
RIF1	YBR275C	XRN1	P22147	1528 aa	Known RBP	2.73	□□□□□ -1.97
RIF1	YBR275C	TDH1	P00360	332 aa	Known RBP	2.73	□□□□□ -1.97
RIF1	YBR275C	HEM13	P11353	328 aa	Known RBP	2.73	□□□□□ -1.97
RIF1	YBR275C	PCT1	P13259	424 aa		2.73	□□□□□ -1.97
RIF1	YBR275C	MSI1	P13712	422 aa		2.73	□□□□□ -1.97
RIF1	YBR275C	HNM1	P19807	563 aa		2.73	□□□□□ -1.97
RIF1	YBR275C	RMA1	P36001	430 aa	Known RBP	2.73	□□□□□ -1.97
RIF1	YBR275C	CDC1	P40986	491 aa		2.73	□□□□□ -1.97
RIF1	YBR275C	HIT1	P46973	164 aa		2.73	□□□□□ -1.97
RIF1	YBR275C	AMA1	P50082	593 aa		2.73	□□□□□ -1.97
RIF1	YBR275C	TLG1	Q03322	224 aa		2.73	□□□□□ -1.97
RIF1	YBR275C	DLT1	Q04216	342 aa		2.73	□□□□□ -1.97
RIF1	YBR275C	ASA1	Q06822	443 aa		2.73	□□□□□ -1.97
RIF1	YBR275C	HBT1	Q07653	1046 aa	Known RBP	2.73	□□□□□ -1.97
RIF1	YBR275C	AIM39	Q08223	395 aa		2.73	□□□□□ -1.97
RIF1	YBR275C	PSF1	Q12488	208 aa		2.73	□□□□□ -1.97
RIF1	YBR275C	CBP6	P07253	162 aa	Predicted RBP	2.72	□□□□□ -1.97
RIF1	YBR275C	AMD1	P15274	810 aa	Known RBP	2.72	□□□□□ -1.97
RIF1	YBR275C	PRI2	P20457	528 aa		2.72	□□□□□ -1.97
RIF1	YBR275C	OCA4	P25366	362 aa		2.72	□□□□□ -1.97
RIF1	YBR275C	LSB5	P25369	354 aa		2.72	□□□□□ -1.97
RIF1	YBR275C	MSG5	P38590	489 aa		2.72	□□□□□ -1.97
RIF1	YBR275C	DLS1	P40366	167 aa		2.72	□□□□□ -1.97
RIF1	YBR275C	BIO3	P50277	480 aa		2.72	□□□□□ -1.97
RIF1	YBR275C	INN1	P53901	409 aa		2.72	□□□□□ -1.97
RIF1	YBR275C	MUK1	Q02866	612 aa		2.72	□□□□□ -1.97
RIF1	YBR275C	YML119W	Q03208	357 aa		2.72	□□□□□ -1.97
RIF1	YBR275C	YRM1	Q12340	786 aa		2.72	□□□□□ -1.97
RIF1	YBR275C	YOR032W-A	Q8TGS1	66 aa		2.72	□□□□□ -1.97
RIF1	YBR275C	GAL4	P04386	881 aa		2.72	□□□□□ -1.97
RIF1	YBR275C	ANB1	P19211	157 aa		2.72	□□□□□ -1.97
RIF1	YBR275C	GSH1	P32477	678 aa		2.72	□□□□□ -1.97
RIF1	YBR275C	YEF1	P32622	495 aa		2.72	□□□□□ -1.97
RIF1	YBR275C	CDC13	P32797	924 aa	Known RBP	2.72	□□□□□ -1.97
RIF1	YBR275C	TIP20	P33891	701 aa		2.72	□□□□□ -1.97
RIF1	YBR275C	RRP1	P35178	278 aa	Predicted RBP	2.72	□□□□□ -1.97
RIF1	YBR275C	COG3	P40094	801 aa		2.72	□□□□□ -1.97
RIF1	YBR275C	YGR054W	P53235	642 aa	Known RBP	2.72	□□□□□ -1.97
RIF1	YBR275C	RPL6A	Q02326	176 aa	Known RBP	2.72	□□□□□ -1.97
RIF1	YBR275C	MUS81	Q04149	632 aa	Predicted RBP	2.72	□□□□□ -1.97
RIF1	YBR275C	SAM4	Q08985	325 aa	Known RBP	2.72	□□□□□ -1.97
RIF1	YBR275C	YDL177C	Q12257	170 aa		2.72	□□□□□ -1.97
RIF1	YBR275C	YOL114C	Q12322	202 aa		2.72	□□□□□ -1.97
RIF1	YBR275C	RPL16A	P26784	199 aa	Known RBP	2.72	□□□□□ -1.97
RIF1	YBR275C	ECM2	P38241	364 aa	Known RBP	2.72	□□□□□ -1.97
RIF1	YBR275C	KRE29	P40026	464 aa		2.72	□□□□□ -1.97
RIF1	YBR275C	SIM1	P40472	476 aa		2.72	□□□□□ -1.97

Retrieved 100 of 5,963 RNA–protein pairs in 43.7 ms