RNA–Protein interactions for RNA: YBR165W

UBS1, Transcript of Ubiquitin-conjugating enzyme suppressor that regulates Cdc34p, yeast

Gene UBS1, Length 834 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
UBS1	YBR165W	RAX2	Q12465	1220 aa		3.45	□□□□□ -1.86
UBS1	YBR165W	ZUO1	P32527	433 aa	Known RBP	3.44	□□□□□ -1.86
UBS1	YBR165W	DTR1	P38125	572 aa		3.44	□□□□□ -1.86
UBS1	YBR165W	SEC9	P40357	651 aa		3.44	□□□□□ -1.86
UBS1	YBR165W	RTT102	P53330	157 aa		3.44	□□□□□ -1.86
UBS1	YBR165W	ASA1	Q06822	443 aa		3.44	□□□□□ -1.86
UBS1	YBR165W	TPI1	P00942	248 aa	Known RBP	3.43	□□□□□ -1.86
UBS1	YBR165W	PDE2	P06776	526 aa		3.43	□□□□□ -1.86
UBS1	YBR165W	RPS18A	P0CX55	146 aa	Known RBP	3.43	□□□□□ -1.86
UBS1	YBR165W	RPS18B	P0CX56	146 aa	Predicted RBP	3.43	□□□□□ -1.86
UBS1	YBR165W	CHA1	P25379	360 aa	Known RBP	3.43	□□□□□ -1.86
UBS1	YBR165W	CHL4	P38907	458 aa		3.43	□□□□□ -1.86
UBS1	YBR165W	REX2	P54964	269 aa	Known RBP	3.43	□□□□□ -1.86
UBS1	YBR165W	MCH1	Q07376	486 aa		3.43	□□□□□ -1.86
UBS1	YBR165W	RNA1	P11745	407 aa	Known RBP	3.42	□□□□□ -1.86
UBS1	YBR165W	CMK2	P22517	447 aa		3.42	□□□□□ -1.86
UBS1	YBR165W	PFF1	P38244	976 aa		3.42	□□□□□ -1.86
UBS1	YBR165W	YFL012W	P43580	148 aa		3.42	□□□□□ -1.86
UBS1	YBR165W	ATP22	P50273	684 aa	Predicted RBP	3.42	□□□□□ -1.86
UBS1	YBR165W	YML6	P51998	286 aa		3.42	□□□□□ -1.86
UBS1	YBR165W	SEH1	P53011	349 aa	Known RBP	3.42	□□□□□ -1.86
UBS1	YBR165W	PRP38	Q00723	242 aa	Predicted RBP	3.42	□□□□□ -1.86
UBS1	YBR165W	CIK1	Q01649	594 aa		3.42	□□□□□ -1.86
UBS1	YBR165W	RPL21A	Q02753	160 aa	Known RBP	3.42	□□□□□ -1.86
UBS1	YBR165W	ENT5	Q03769	411 aa	Known RBP	3.42	□□□□□ -1.86
UBS1	YBR165W	LDS2	Q08218	356 aa		3.42	□□□□□ -1.86
UBS1	YBR165W	SFM1	Q12314	213 aa		3.42	□□□□□ -1.86
UBS1	YBR165W	RPL21B	Q12672	160 aa	Known RBP	3.42	□□□□□ -1.86
UBS1	YBR165W	SMC6	Q12749	1114 aa		3.42	□□□□□ -1.86
UBS1	YBR165W	SOL2	P37262	315 aa		3.41	□□□□□ -1.86
UBS1	YBR165W	BMT2	P38278	337 aa		3.41	□□□□□ -1.86
UBS1	YBR165W	CIN2	P46670	268 aa		3.41	□□□□□ -1.86
UBS1	YBR165W	TRF5	P48561	642 aa	Known RBP	3.41	□□□□□ -1.86
UBS1	YBR165W	VAC7	P53950	1165 aa		3.41	□□□□□ -1.86
UBS1	YBR165W	MEH1	Q02205	184 aa		3.41	□□□□□ -1.86
UBS1	YBR165W	MSC3	Q05812	728 aa		3.41	□□□□□ -1.86
UBS1	YBR165W	AAD15	Q08361	143 aa		3.41	□□□□□ -1.86
UBS1	YBR165W	SPE3	Q12074	293 aa	Known RBP	3.41	□□□□□ -1.86
UBS1	YBR165W	SRP72	P38688	640 aa	Known RBP	3.4	□□□□□ -1.87
UBS1	YBR165W	HIF1	Q12373	385 aa		3.4	□□□□□ -1.87
UBS1	YBR165W	HMS1	Q12398	434 aa		3.4	□□□□□ -1.87
UBS1	YBR165W	RPL1A	P0CX43	217 aa	Known RBP	3.39	□□□□□ -1.87
UBS1	YBR165W	RPL1B	P0CX44	217 aa	Known RBP	3.39	□□□□□ -1.87
UBS1	YBR165W	MAS2	P11914	482 aa		3.39	□□□□□ -1.87
UBS1	YBR165W	PEX22	P39718	180 aa		3.39	□□□□□ -1.87
UBS1	YBR165W	SEC27	P41811	889 aa	Known RBP	3.39	□□□□□ -1.87
UBS1	YBR165W	ASN2	P49090	572 aa	Known RBP	3.39	□□□□□ -1.87
UBS1	YBR165W	YPL107W	Q02873	248 aa		3.39	□□□□□ -1.87
UBS1	YBR165W	YLR177W	Q06251	628 aa		3.39	□□□□□ -1.87
UBS1	YBR165W	RPN5	Q12250	445 aa	Known RBP	3.39	□□□□□ -1.87
UBS1	YBR165W	RRP7	P25368	297 aa	Predicted RBP	3.38	□□□□□ -1.87
UBS1	YBR165W	MSP1	P28737	362 aa		3.38	□□□□□ -1.87
UBS1	YBR165W	TOA1	P32773	286 aa		3.38	□□□□□ -1.87
UBS1	YBR165W	HEM14	P40012	539 aa		3.38	□□□□□ -1.87
UBS1	YBR165W	ERO1	Q03103	563 aa		3.38	□□□□□ -1.87
UBS1	YBR165W	IPK1	Q06667	281 aa		3.38	□□□□□ -1.87
UBS1	YBR165W	PUT4	P15380	627 aa		3.37	□□□□□ -1.87
UBS1	YBR165W	ANP1	P32629	500 aa		3.37	□□□□□ -1.87
UBS1	YBR165W	MLH1	P38920	769 aa		3.37	□□□□□ -1.87
UBS1	YBR165W	VMA8	P32610	256 aa	Known RBP	3.36	□□□□□ -1.87
UBS1	YBR165W	PDC2	P32896	925 aa		3.36	□□□□□ -1.87
UBS1	YBR165W	WSS1	P38838	269 aa		3.36	□□□□□ -1.87
UBS1	YBR165W	YGR067C	P53243	804 aa		3.36	□□□□□ -1.87
UBS1	YBR165W	VPS9	P54787	451 aa		3.36	□□□□□ -1.87
UBS1	YBR165W	HEM4	P06174	275 aa		3.35	□□□□□ -1.87
UBS1	YBR165W	LDS1	P31379	325 aa		3.35	□□□□□ -1.87
UBS1	YBR165W	KAP104	P38217	918 aa	Known RBP	3.35	□□□□□ -1.87
UBS1	YBR165W	YHR177W	P38867	453 aa		3.35	□□□□□ -1.87
UBS1	YBR165W	CTK3	P46963	296 aa	Predicted RBP	3.35	□□□□□ -1.87
UBS1	YBR165W	HST1	P53685	503 aa		3.35	□□□□□ -1.87
UBS1	YBR165W	GYL1	Q04322	720 aa		3.35	□□□□□ -1.87
UBS1	YBR165W	PRM7	Q12459	698 aa		3.35	□□□□□ -1.87
UBS1	YBR165W	SRN2	Q99176	213 aa		3.35	□□□□□ -1.87
UBS1	YBR165W	MRPL8	P22353	238 aa		3.34	□□□□□ -1.87
UBS1	YBR165W	RPL16A	P26784	199 aa	Known RBP	3.34	□□□□□ -1.87
UBS1	YBR165W	FMT1	P32785	401 aa		3.34	□□□□□ -1.87
UBS1	YBR165W	WSC4	P38739	605 aa		3.34	□□□□□ -1.87
UBS1	YBR165W	MNL1	P38888	796 aa		3.34	□□□□□ -1.87
UBS1	YBR165W	YER184C	P39961	794 aa		3.34	□□□□□ -1.87
UBS1	YBR165W	PFS2	P42841	465 aa	Known RBP	3.34	□□□□□ -1.87
UBS1	YBR165W	YMR010W	Q03687	405 aa		3.34	□□□□□ -1.87
UBS1	YBR165W	GAT3	Q07928	141 aa		3.34	□□□□□ -1.87
UBS1	YBR165W	ATP16	Q12165	160 aa		3.34	□□□□□ -1.87
UBS1	YBR165W	TIR4	Q12218	487 aa	Predicted RBP	3.34	□□□□□ -1.87
UBS1	YBR165W	LDB17	Q12342	491 aa		3.34	□□□□□ -1.87
UBS1	YBR165W	YOL085C	Q99345	113 aa		3.34	□□□□□ -1.87
UBS1	YBR165W	RPS19A	P07280	144 aa	Known RBP	3.33	□□□□□ -1.88
UBS1	YBR165W	RPS19B	P07281	144 aa	Predicted RBP	3.33	□□□□□ -1.88
UBS1	YBR165W	ASP3-2	P0CX77	362 aa		3.33	□□□□□ -1.88
UBS1	YBR165W	ASP3-3	P0CX78	362 aa		3.33	□□□□□ -1.88
UBS1	YBR165W	ASP3-4	P0CX79	362 aa		3.33	□□□□□ -1.88
UBS1	YBR165W	ASP3-1	P0CZ17	362 aa		3.33	□□□□□ -1.88
UBS1	YBR165W	MPE1	P35728	441 aa	Known RBP	3.33	□□□□□ -1.88
UBS1	YBR165W	SHE3	P38272	425 aa	Known RBP	3.33	□□□□□ -1.88
UBS1	YBR165W	SPP381	P38282	291 aa	Predicted RBP	3.33	□□□□□ -1.88
UBS1	YBR165W	YDR115W	Q04598	105 aa		3.33	□□□□□ -1.88
UBS1	YBR165W	FSH2	Q05015	223 aa		3.33	□□□□□ -1.88
UBS1	YBR165W	YOR376W	Q08900	122 aa		3.33	□□□□□ -1.88
UBS1	YBR165W	BI3	Q9ZZW7	517 aa		3.33	□□□□□ -1.88
UBS1	YBR165W	UNG1	P12887	359 aa		3.32	□□□□□ -1.88

Retrieved 100 of 5,963 RNA–protein pairs in 36.6 ms